|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:692171..697112+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029161 ID=XLOC_029161|Name=XLOC_029161|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4942bp|location=Sequence derived from alignment at sc0000067_pilon:692171..697112+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGTTTAGAGTAGCCCAACAATCACCATCGAATTCAGTGTCACCTTTGGT
TTCACCCAAACGACTCAATAAACCGAACGGAAAAGGTACTGGTCACAACA
TCCATCGTTTTTGTTTAagatttcatgtttttttttgtaagcatacaaaa
tttcgaaaacagactcggagatgcttaggtcgagggcttgacaaggctga
aaaatgcgcATAAGGGTGCTTATATCCCAAGCAAAATAGTAGGGAAATTC
CGAAAGTCCGTAAAATCCCAACCAAGataaggaaaataatttttttgtag
gctcaaggtaatgtttagcatatgcttaaatttttgccatatctgaTCCT
AAATATGCTTGTAAGTGCAATGCCTTTAATAAATATGTATTGTACTTACG
GAACAATACTAAAGgaacaactttttcaaattagTTGTACATCAGCACTA
CccgattttttgtcattttggcgcGTTTGATTGTTGTCTGAACTTTTGAA
TAAAACTGTTTTTGAAGTTCTTTCGGGAATATTTATAACAAATTTAGAAA
TTGGGCTAATCATGGTCCTTAAATTCCAAATTCAATTCGACACAAGATTT
TCGACGAGAGCTTCCCGATAGCGATAATAAATTGATAAATCTCAATAAGG
CACAATTGGTGCATATGttttttttGAATAAGGTCCCAAAAACAATTCTT
GCAAAgatttggacagaaattcttatatTACGACTGTTAAATGATCCGTT
TTGTTCTCTCAGGTGAAACACTTTTGCACGTGGCTTGTAATAAGCGTAAA
ATTCCTCGAATCAAAGCGCTCATCGAAATGGGTGCTAAAGTTAACACACA
AGACAACGCAGGGTGGACGCCCTTACACGAGGCGTGTTGCTTTGGTAACC
ACGAAGTTGTGCAAGAACTCACGAAATCCCCCGGTTAGTCTTATCAATTG
TGAATTATCGCCCTGAATTTCTTGAGAAATATTATAAAAGATCATCTAAA
ATACAGTTATGCGAGGGACTTAAGTTGCAATCTCACAgttttcatttgac
tttattTCGCGAAATAGGCAAATTCCCGCAattaaaatagtgaaaatagc
ACGAAAATcaccacaaaactttttgatattttctagaTATTGATTTAACG
TTGACACGTGGTAAAAAGACGCAATGCATTGATGGAACTACCGCATTGCA
TGACGCTGTAGAGAATAATTTCCTTAATATCGCCGAGTTCTTGTTACAAA
AAGGAGGTAGGTGCATAATAGAAAAGGTTAACCAGTCACACCTTCACAAC
TGTAGCCtataccaaactcttcttcgctgactgaaaagataacgcgTAAG
GTTTGTGATGGTTATGCAACATTTCGTGCCTCagacttttttccaaaaat
ctctgAATGTCTCTGCGGTGAAGCGTAACTATTTTCAGCATtcttactct
aggggctgagttaggtccccgtatgcacatcggcgtatagtcattttttc
ttttgatcatgaaagtatagtccttgaagagtcagaaaacgtgtgtggcg
ttatttggatcaggctcaaatttccataatggcggattttagattttcaa
ccctttttagccctcttgcttgaaaaaaaaatttggtataTGATATGCAA
GGTataaagctcaaaaaatatttttcttagtctagcagagcctaagagcc
catgtgacgaaagaaaattttgaatccgccattatggatttggaaattta
tgtagaaaaaaaacttttcctgaattttattatttgaacggtaggcaaga
ccctccgAaaatttcaagtaaattaagtaagccaatcaaatgttacagcc
acggaaatctggaaccaaaagtagtcatttcaaaaaatcgaaatcgtaAG
TGCTTcctatctccagataacgaaattttcagaccatgattttgaccttt
tttttaatcaacataaaatttgtgactgattggtatataatagggtatgt
ttaaagtcaaaaaaaatttttttcaagcaagagggctaaaaagggttgaa
aatctaaaatccgccattatggaaatttgtgcctgatccaaataacgcca
cacacgttttctgactcttcaaggactatactttcatgatcaaaagaaaa
aatgactatacgccgatgcgcatacgagacctaactcagcccctagagta
tctATTTAGCTCAACTAATAAAGTGATGCtaaggccagtctccacttgcg
cgcgtttcgatcgcactttttcgagtaaagctttcacgctattggtcaaa
agaaaaatgaagcaactccattggcgcgatctgatgtaacggttgaaaaa
agttgaaatgtgttcaactttttcttcgagcgcacgctacatttttatga
cgtaatcttttttccaagcaaaaaagattgaagccaaaaagtgcggtCGC
AGTGCGCGGAAGTGGATACCGGACTTTACATTTAACACATCAATGCAATG
gtatctttcatttttaaaaagagcaCTCCGACGCTTTTGTTTTCTCGGAT
TTTGTCTCAGAAAACTGGAaccaaccactgacctttacatatctctggac
caagctatatccgccatctttgatcgaagttcttttgaaagtttgtacct
gttttgaagttcaaaaacatacagACGTCAGTACTACGATCAagacgtca
aatcacagtagagctgacagttagttggtcttaaagcggctgtatttctt
tgtgtgttttagttaGAGAGTCgttgtaatacaattttttgctcagaatt
tcatgcactatcagatggtaccaatcattttcgtttattttgacttttga
aaataagcaatttctctaccccttattttcttTCGCAGTTTTACCTATGG
CGTCCCTATTTTGGTCAAAGTTCAAcaatcacttctattgaaaattctat
tgtaaaaacgttgattaggtcattaaatgaaagtccataaaagacggctc
gccatacaaatcggacggtttctacatgatttgacgataaaaatgaaaat
ttgtttttccttttttgccgattactagttcaatttttaagaataaggag
caatatttttaccaatgtatagcaaaagaaattcttaacgcaatgatatt
aaattggttcttgtaaactGTCAGAAGtggagtaaaatcaagatgaactt
ataattttctcgagctctagctttccatattatggtgcggtcatgatgcg
gttatatcagtagaatcgctaagaaattctgagcaagaagatataggtac
cttttcgtataagagaggtgtacccaaaatataagccctaaaagtttgcg
cataatcagacttgaaacaaaagaattttgtaacaacacgctaattatgc
agattttttacaacaaaagaaacctatttactcgacataaactcccttaa
gggcaagagacctggtatatgacgagccgtttttccattgttttcaaaaa
gctgtttttccatctctttacattcctctgaatacatatactgttctttg
gaagaGACTAAAAATAGCTAGGTCGTAAAAAacgcataatattttgcttg
gccggcattgagtaacttggtccagggatatataaatgTCAGTGGGAACA
ACTGAGACATAGAATCTCGCTtactttcaaaatatgaaaatagcCCGTGG
CGGGCGTGCTAGTACAGGCCACCACAGCTGAGATATTTGAAAACTTGTGT
ATGATCGGGTGGAtgatagtttttttctgattatttgcacaaagatgcgt
aatattttattattattatattattgatAACAAATCCAACCATCAAgtat
ggtttaattgtcaataaaactgatttttgatgccgGTACTTTCTAacaat
cgccggaacagccgaatatcgccggaaaaacggtttttcttgaatttctc
gagctttactttatatttttaatgaaattttgcacactgatgcaaaatgg
caatacctaaaatgtgaaggagcctgatttttgaagaaaaaaaatatcgg
ccaaaaatgcctataatatgccgtcaaaatcggtttgttgccattttgtc
gagatttcattaatggTttttcccgatttttgcacaaagatgtgtatcag
caatgccctaagtgtggccgattcggatttttgagaatcatgtttttccg
gtcgaaaatactggaagtatgccggaaatcgccgtttttgcagatttgaa
ttgggctttttccattcatatatttctttgttttttcacttaaaaaatta
ttgataacaatgccaccatcaagcatgattcaatgattcaattttgcaac
cggaactttctatttcttttttccctaaccccccccccacccatcaacaa
tcaatgatgaaatttaatgcattttcgctaaccgctaatattttcttaat
gattgtttttctccttattgctatctaagtttcatcatcaggtaggtcca
ttcagcatgttatCTGTTAAATGTTTATGCCGTCTCTTACCAAGCCGTGt
tataattttctttggttttgtcTACAGGTCGAGACCTACTTCATTTGAGA
AGAGCTGATGGGAAGACACCACTTGATATTTGCCGAGAACCGTCGGCAAT
GAAaaccttgttgaaaagatatgaGAATGTGGATATGAGTAGCACAAATA
AAGAAATGTACAAGACTTTCGTTTCACCTGAACCTCAGAATATGGAATTA
TTTTTACGAATACTTTTGCAGCTTATCACCAGTTACCGGGACTCGAACAT
AGACGGCTTAAGATGCAGTTCGAGCCAACTTGAAGCCCAATACAATGATT
TATTGATGCATGTCAAATTACTGAACGGGCATAAGATACCCCTCAAATGC
AAACTGACTTTGAAACAAATTAAACGCGTTTTGTTTAGCTAA Coding sequence (CDS) from alignment at sc0000067_pilon:692171..697112+ >XLOC_029161 ID=XLOC_029161|Name=XLOC_029161|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1482bp|location=Sequence derived from alignment at sc0000067_pilon:692171..697112+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGTTTAGAGTAGCCCAACAATCACCATCGAATTCAGTGTCACCTTTGGT
TTCACCCAAACGACTCAATAAACCGAACGGAAAAGTCGTTTAGAGTAGCC
CAACAATCACCATCGAATTCAGTGTCACCTTTGGTTTCACCCAAACGACT
CAATAAACCGAACGGAAAAGGTGAAACACTTTTGCACGTGGCTTGTAATA
AGCGTAAAATTCCTCGAATCAAAGCGCTCATCGAAATGGGTGCTAAAGTT
AACACACAAGACAACGCAGGGTGGACGCCCTTACACGAGGCGTGTTGCTT
TGGTAACCACGAAGTTGTGCAAGAACTCACGAAATCCCCCGGTGAAACAC
TTTTGCACGTGGCTTGTAATAAGCGTAAAATTCCTCGAATCAAAGCGCTC
ATCGAAATGGGTGCTAAAGTTAACACACAAGACAACGCAGGGTGGACGCC
CTTACACGAGGCGTGTTGCTTTGGTAACCACGAAGTTGTGCAAGAACTCA
CGAAATCCCCCGaTATTGATTTAACGTTGACACGTGGTAAAAAGACGCAA
TGCATTGATGGAACTACCGCATTGCATGACGCTGTAGAGAATAATTTCCT
TAATATCGCCGAGTTCTTGTTACAAAAAGGAGaTATTGATTTAACGTTGA
CACGTGGTAAAAAGACGCAATGCATTGATGGAACTACCGCATTGCATGAC
GCTGTAGAGAATAATTTCCTTAATATCGCCGAGTTCTTGTTACAAAAAGG
AGGTCGAGACCTACTTCATTTGAGAAGAGCTGATGGGAAGACACCACTTG
ATATTTGCCGAGAACCGTCGGCAATGAAaaccttgttgaaaagatatgaG
AATGTGGATATGAGTAGCACAAATAAAGAAATGTACAAGACTTTCGTTTC
ACCTGAACCTCAGAATATGGAATTATTTTTACGAATACTTTTGCAGCTTA
TCACCAGTTACCGGGACTCGAACATAGACGGCTTAAGATGCAGTTCGAGC
CAACTTGAAGCCCAATACAATGATTTATTGATGCATGTCAAATTACTGAA
CGGGCATAAGATACCCCTCAAATGCAAACTGACTTTGAAACAAATTAAAC
GCGTTTTGTTTAGCTAAGTCGAGACCTACTTCATTTGAGAAGAGCTGATG
GGAAGACACCACTTGATATTTGCCGAGAACCGTCGGCAATGAAaaccttg
ttgaaaagatatgaGAATGTGGATATGAGTAGCACAAATAAAGAAATGTA
CAAGACTTTCGTTTCACCTGAACCTCAGAATATGGAATTATTTTTACGAA
TACTTTTGCAGCTTATCACCAGTTACCGGGACTCGAACATAGACGGCTTA
AGATGCAGTTCGAGCCAACTTGAAGCCCAATACAATGATTTATTGATGCA
TGTCAAATTACTGAACGGGCATAAGATACCCCTCAAATGCAAACTGACTT
TGAAACAAATTAAACGCGTTTTGTTTAGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:692171..697112 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 379-741:4580 |
| Aaloc | 259-375:1139 |
| Aaloc | 88-255:765 |
| Aaloc | 1-84:1 |
|
