XLOC_028638 (mRNA) -

Overview
NameXLOC_028638
Unique NameXLOC_028638
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000293_pilon:18435..19414+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028638 ID=XLOC_028638|Name=XLOC_028638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=980bp|location=Sequence derived from alignment at sc0000293_pilon:18435..19414+ (Clytia hemisphaerica_ch_hm2_pilon)
gggtcatttttttaaaacgGTGACCAAtttttttATGGGATAACAAGAAC AAGAATGGAGACTTTAATTGCGTTTTCTGTTTTGGTGTTGTTCGTCTCTG GCTATGAAGaatttcgagggtaaaacaTAATTTTCACGTAGTTTTGTTTG ACCGGCTAAAGAAACAATCGGATATAATCGTTTTTGCTATTATACCCGAA AAACCTTAAGGttctttttcccttttttagaGACCAAGTTGTTCGAGTGA AGGCGAAAAGCCTGGCCCATCTCACCTTGTTAAAGAAATACATCGAAACA GAGAAAAATGTAAGCACGTTTACAGAGTGGTGTACGGTAATGTACGGTAA TGTACAGATTGTCCCGTTTCCTCATGACTGTGGCTATTCTTTTTCAATGA GCACAGCCCTTTCTCACAACCCCGATAGAATTTTCCACAGAGGggatata aaaatttctaacGTAATCCCTATGGAGATGACAAATTGATTGTTCCAAGC TAAAAATCCAGTTCCGATGATTTAAAGTCatatttttttacattgaattt ggAATGGGGAagaaaagtcaatttcccagtagggCTGAAATCGTAGGGTA TTTTACCAACCGGACCGAAATTTGAGCAAATATTCCAGTGGGTTGGGGAT ACCACCAGATCGATGACACAGAGGTGTATGAGTTCAGCTAGCTGTAAAAA ATTACCTATTTTTACGAATTCACTATTTCCCAAAGATTCCTGTATCATCA TTAATTGTTAGGTCGATGTTTGGGGCGAGGGCGAGGAGTACGAATTTCAC CTTCCATCGAAGCAAATCTCATCTTTCGAGAAATGGTTGACAGAAAATGG AATCTCTTATGAAGTTTTGGTGTTTGATTTGGAAGACTTACTTAACGAAG AAGAGGTTTCGAACACCAAAAATTCTTCCACTTTCGATTATAACAAATAC AATGATTGGTCTGAGGTacgattttatttg

Coding sequence (CDS) from alignment at sc0000293_pilon:18435..19414+

>XLOC_028638 ID=XLOC_028638|Name=XLOC_028638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=834bp|location=Sequence derived from alignment at sc0000293_pilon:18435..19414+ (Clytia hemisphaerica_ch_hm2_pilon)
gggtcatttttttaaaacgGTGACCAAtttttttATGGGATAACAAGAAC
AAGAATGGAGACTTTAATTGCGTTTTCTGTTTTGGTGTTGTTCGTCTCTG
GCTATGAAGaatttcgagggggtcatttttttaaaacgGTGACCAAtttt
tttATGGGATAACAAGAACAAGAATGGAGACTTTAATTGCGTTTTCTGTT
TTGGTGTTGTTCGTCTCTGGCTATGAAGaatttcgaggaGACCAAGTTGT
TCGAGTGAAGGCGAAAAGCCTGGCCCATCTCACCTTGTTAAAGAAATACA
TCGAAACAGAGAAAAATaGACCAAGTTGTTCGAGTGAAGGCGAAAAGCCT
GGCCCATCTCACCTTGTTAAAGAAATACATCGAAACAGAGAAAAATGTCG
ATGTTTGGGGCGAGGGCGAGGAGTACGAATTTCACCTTCCATCGAAGCAA
ATCTCATCTTTCGAGAAATGGTTGACAGAAAATGGAATCTCTTATGAAGT
TTTGGTGTTTGATTTGGAAGACTTACTTAACGAAGAAGAGGTTTCGAACA
CCAAAAATTCTTCCACTTTCGATTATAACAAATACAATGATTGGTCTGAG
GTacgattttatttgGTCGATGTTTGGGGCGAGGGCGAGGAGTACGAATT
TCACCTTCCATCGAAGCAAATCTCATCTTTCGAGAAATGGTTGACAGAAA
ATGGAATCTCTTATGAAGTTTTGGTGTTTGATTTGGAAGACTTACTTAAC
GAAGAAGAGGTTTCGAACACCAAAAATTCTTCCACTTTCGATTATAACAA
ATACAATGATTGGTCTGAGGTacgattttatttg
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_028638XLOC_028638-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000293_pilongenomesc0000293_pilon:18435..19414 +
Properties
Property NameValue
Aaloc202-420:762
Aaloc124-201:232
Aaloc4-120:1