XLOC_028627 (mRNA) -

Overview
NameXLOC_028627
Unique NameXLOC_028627
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000159_pilon:10644..11594+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028627 ID=XLOC_028627|Name=XLOC_028627|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=951bp|location=Sequence derived from alignment at sc0000159_pilon:10644..11594+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAGAAATTAAATCATTTGGATTTCAACTTCCTGCAAAAACTGTTGttgc tcaaaacaaaacaaacaaagtaCGACGACGACGTCGCTCAACAGAAACAT CGTCCAACCTTTACGTTCGTTCAAAACTAACAGAAAACTACTACAAGATG AACTCAACACACGGTTTCTCTTTCCTACTCCGGACACGGCAACCGAACGG ATTTGTAGCCATCTTGATGGATAAAGAACCGACCAGTGCTGACGATGCCA CTTTCCAATACATTCTCATCGAAATCATCAACTCATATTTGAAAATCACC CATAAAAGTACAGACCAGAATGCCGTCAAAGTCATCCACAATGAATCGCC AGAGCTGTTTGTGTCCAATGGCCAACAGCTAGAAATCACGGTCACATCAT CATATCTTCAAATTGGTGCAAAGAAAACTGATTTCCAAACACCTTTCCCT TTAACAGTCAATTTGGTTTTAATGGGTGGTGTGGATAAGCCTTCGCTTTA CATCAAAACCGTCTCTACTACGGCTATGAGTGGCTGTTTGCAAGCCGTCA AATTTGGTAATAATTTCTTGACCAACCAAGCTATCCCTTCTAGTTTTACC GTCAGCGTCATAATACCAGACAGTGAACCAGGATTCCAGTTAGGCTGTCC GGGAACTCCAGTGTGCGATTCTAAACCATGCCTTTACAACGGGACCTGTG TAGACCAATGGAACGATTTCACCTGCCAGTGTTCTGAAGGCTTTGGTGGA AAAACTTGTTCTGAGTTTGGATGTACATTGAACGACACATGTCCAGCTTC ATCTGGTTATTGTTACGACGTACCTCTATCTAGTCCACCAGCCACTAAAT gtaagttttttgagttttggtttttGTCTCTTGCGCTATATAATTGTGGT ATGAATCAAACTTCGTCCCGATCTCCAgacactttctttcattggagCTA A

Coding sequence (CDS) from alignment at sc0000159_pilon:10644..11594+

>XLOC_028627 ID=XLOC_028627|Name=XLOC_028627|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1902bp|location=Sequence derived from alignment at sc0000159_pilon:10644..11594+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAGAAATTAAATCATTTGGATTTCAACTTCCTGCAAAAACTGTTGttgc
tcaaaacaaaacaaacaaagtaCGACGACGACGTCGCTCAACAGAAACAT
CGTCCAACCTTTACGTTCGTTCAAAACTAACAGAAAACTACTACAAGATG
AACTCAACACACGGTTTCTCTTTCCTACTCCGGACACGGCAACCGAACGG
ATTTGTAGCCATCTTGATGGATAAAGAACCGACCAGTGCTGACGATGCCA
CTTTCCAATACATTCTCATCGAAATCATCAACTCATATTTGAAAATCACC
CATAAAAGTACAGACCAGAATGCCGTCAAAGTCATCCACAATGAATCGCC
AGAGCTGTTTGTGTCCAATGGCCAACAGCTAGAAATCACGGTCACATCAT
CATATCTTCAAATTGGTGCAAAGAAAACTGATTTCCAAACACCTTTCCCT
TTAACAGTCAATTTGGTTTTAATGGGTGGTGTGGATAAGCCTTCGCTTTA
CATCAAAACCGTCTCTACTACGGCTATGAGTGGCTGTTTGCAAGCCGTCA
AATTTGGTAATAATTTCTTGACCAACCAAGCTATCCCTTCTAGTTTTACC
GTCAGCGTCATAATACCAGACAGTGAACCAGGATTCCAGTTAGGCTGTCC
GGGAACTCCAGTGTGCGATTCTAAACCATGCCTTTACAACGGGACCTGTG
TAGACCAATGGAACGATTTCACCTGCCAGTGTTCTGAAGGCTTTGGTGGA
AAAACTTGTTCTGAGTTTGGATGTACATTGAACGACACATGTCCAGCTTC
ATCTGGTTATTGTTACGACGTACCTCTATCTAGTCCACCAGCCACTAAAT
gtaagttttttgagttttggtttttGTCTCTTGCGCTATATAATTGTGGT
ATGAATCAAACTTCGTCCCGATCTCCAgacactttctttcattggagCTA
ATCAGAAATTAAATCATTTGGATTTCAACTTCCTGCAAAAACTGTTGttg
ctcaaaacaaaacaaacaaagtaCGACGACGACGTCGCTCAACAGAAACA
TCGTCCAACCTTTACGTTCGTTCAAAACTAACAGAAAACTACTACAAGAT
GAACTCAACACACGGTTTCTCTTTCCTACTCCGGACACGGCAACCGAACG
GATTTGTAGCCATCTTGATGGATAAAGAACCGACCAGTGCTGACGATGCC
ACTTTCCAATACATTCTCATCGAAATCATCAACTCATATTTGAAAATCAC
CCATAAAAGTACAGACCAGAATGCCGTCAAAGTCATCCACAATGAATCGC
CAGAGCTGTTTGTGTCCAATGGCCAACAGCTAGAAATCACGGTCACATCA
TCATATCTTCAAATTGGTGCAAAGAAAACTGATTTCCAAACACCTTTCCC
TTTAACAGTCAATTTGGTTTTAATGGGTGGTGTGGATAAGCCTTCGCTTT
ACATCAAAACCGTCTCTACTACGGCTATGAGTGGCTGTTTGCAAGCCGTC
AAATTTGGTAATAATTTCTTGACCAACCAAGCTATCCCTTCTAGTTTTAC
CGTCAGCGTCATAATACCAGACAGTGAACCAGGATTCCAGTTAGGCTGTC
CGGGAACTCCAGTGTGCGATTCTAAACCATGCCTTTACAACGGGACCTGT
GTAGACCAATGGAACGATTTCACCTGCCAGTGTTCTGAAGGCTTTGGTGG
AAAAACTTGTTCTGAGTTTGGATGTACATTGAACGACACATGTCCAGCTT
CATCTGGTTATTGTTACGACGTACCTCTATCTAGTCCACCAGCCACTAAA
TgtaagttttttgagttttggtttttGTCTCTTGCGCTATATAATTGTGG
TATGAATCAAACTTCGTCCCGATCTCCAgacactttctttcattggagCT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_028627XLOC_028627-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000159_pilongenomesc0000159_pilon:10644..11594 +
Properties
Property NameValue
Aaloc1-951:1