XLOC_028434 (mRNA) -

Overview
NameXLOC_028434
Unique NameXLOC_028434
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000019_pilon:648631..650737-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028434 ID=XLOC_028434|Name=XLOC_028434|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2107bp|location=Sequence derived from alignment at sc0000019_pilon:648631..650737- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGGAGAATATTTTTGAAGGCTGGATTACCAATACATCGTTTAATATG GAACATAAGAAACATTGTTCAAAATGAAAGCCTTATTGGTGATGAAGAAA TTGTTGATTTGGTCTGTCAAACACTTGAGAAAAATCACCAGCATATTTCA GCGCTGACGGTTGGTTTATATCCTAAAAACATTTTCTTCGCTTACTGCAA AATCAATAACTATGAGAAGAGATGTAACAATATTATTGATGGCAGGTTAT GATGATCTCACCTCTGAATCATGAAACACTTAATTCTTTATGGATAATAA TCTACAATAAAGAAAAAGAAGTTTTTATATGTTTCAAAAGAACATTTTAA AAAACTTCAAAACTAGTTTACACATCGCTTGTTTGCTCATGGTAGTTTAG TTCGTTGAAATTTGGTCTGGTGCCTAAAGAACAGCCCCCCTGTTTGTTAG ACTAGAGTCTACTTTTGGCTGAACTTTGCTTTTCGATAATTTTTTATGAC GCTGAGTCCAGTGAAGTAGACTAGGAGCGTTTGGCGAGATCGCCATTTTG AAAGAAAATGTTAAGAATCCAAATAATAATAAAACTATGAGAAACAAACA TCAATAACAGATTTGCAATCCCTTATTCTCAAATAAAAACATCAAACATT GCTTCATACTGTTTTTACCTTCCAAAAACAACTAAAATCTGACAGACTGT TTGTTTGTTATCTTCAAACCTGCCCTGCTCTGTTTATAAGGCCCCTGAGA GTCTCTGTCTATCGTATGTGAAAAATCACTTAGCCTTCTTTACTTTATAG GTTCTGAAGCCTTACATGGAATGTTTAAAAATTGCACAAGACATTCAGGA AGGAAATCGCACAAGTTTTCGAAGAATCCTTTCTGCTACCAAGAATTTAT ACATTAGAAGACTGGTAAAAATGAATCATTTTTTCAAACGTTCCTTCCCT CCCCCGCCGGAGGATGATTGTAAAACTTGACAGAAAATCGTAATTTTATT CATTTCAATTAGTTTTCGAGCACTACCATAATACCTCCTAGTTCGAACAG TGCTAAAAACTTTTAAAATTGAATAGTCAATAGAAACTATTATATCATTT CTTGTTATATTTTAAGGTTGATGGTAACCACATTGCTGGCAAGAAAGTTT TGATCTCATCTTCGTATTTCATCAAAGAGAACGAAAACGACAAAAGACAT GACCAATATCACCTAGAGCCTTTAATTGGGCTTCTAGCTGCATTAAGTGA TGTCTTTGGTCCTGAAAATACACACTTCATTGAGTTCGATTCTCAATCCA GAACAAGACCTCCATCTGCAAGTTCTAGAAAGCGTCCACGAAGTAATGGT GCAAACCAATCTAATTCTCAACCAGGAAATTCTGGAAACGAGACCAGGAT CTTAATGAGAAAAAACATCGATTTCCATAACAACAGACCTGGTAGCGATT TTGAAAAGATGTTTGAACAAGCTCAATCATTTGCAAAATCCAAAGCTCAT CAAATGGTAAAATCTTTGTTTCATTATGCCCCATAAGCTTTTTTTTATAA ATACATCCAAAGTTTTCGGATTTTATTAACTTTTTGAGTTTTAAGCCTAA ATATGTTTTTTAACATGTTCTTATTTTCACCATTTTGTGGGTATTTTTGT CCATTTTCCTAAGAAACTAGAGTCCGAAAAGCCTTAAAATGTTCTTAACT TGTTCTTTAAAATTTGGCCCTTGTATAGTTTGTTATTATAAAAAAACGTG TACGTTACTGACTCTTATACCAGGACCAAGGAGAAAGTTAAATCCGCCAT CTTTAATTGGAGTTTTAAAAAACATAAACATCGGTCCCAGTCCCAATCGA GTTTCAGTCCGTTATCTTTCCCCCCACTGGCTGGAAAATGTCACCGGGTC TGCGAGAAAGGGGCGTTTCAAGGTAAAGTGTTTTATCTTGTTTATTTTTT ATCGTCTATTGATTCTTTTTAACAGGCAATCTTGAAACATGCTAAGAGTC GACGAACACCACCAGACGAGCCGTTTCAAAATTTCAATAATTTCAACAAA AAGCAACCCAATACTTTTGGAAGTGATTTGCTGTCACCTATCCTCTATGC ATCTTCA

Coding sequence (CDS) from alignment at sc0000019_pilon:648631..650737-

>XLOC_028434 ID=XLOC_028434|Name=XLOC_028434|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1590bp|location=Sequence derived from alignment at sc0000019_pilon:648631..650737- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGGAGAATATTTTTGAAGGCTGGATTACCAATACATCGTTTAATATG
GAACATAAGAAACATTGTTCAAAATGAAAGCCTTATTGGTGATGAAGAAA
TTGTTGATTTGGTCTGTCAAACACTTGAGAAAAATCACCAGCATATTTCA
GCGCTGACGGTTTGGAGAATATTTTTGAAGGCTGGATTACCAATACATCG
TTTAATATGGAACATAAGAAACATTGTTCAAAATGAAAGCCTTATTGGTG
ATGAAGAAATTGTTGATTTGGTCTGTCAAACACTTGAGAAAAATCACCAG
CATATTTCAGCGCTGACGGTTCTGAAGCCTTACATGGAATGTTTAAAAAT
TGCACAAGACATTCAGGAAGGAAATCGCACAAGTTTTCGAAGAATCCTTT
CTGCTACCAAGAATTTATACATTAGAAGACTGGTTCTGAAGCCTTACATG
GAATGTTTAAAAATTGCACAAGACATTCAGGAAGGAAATCGCACAAGTTT
TCGAAGAATCCTTTCTGCTACCAAGAATTTATACATTAGAAGACTGGTTG
ATGGTAACCACATTGCTGGCAAGAAAGTTTTGATCTCATCTTCGTATTTC
ATCAAAGAGAACGAAAACGACAAAAGACATGACCAATATCACCTAGAGCC
TTTAATTGGGCTTCTAGCTGCATTAAGTGATGTCTTTGGTCCTGAAAATA
CACACTTCATTGAGTTCGATTCTCAATCCAGAACAAGACCTCCATCTGCA
AGTTCTAGAAAGCGTCCACGAAGTAATGGTGCAAACCAATCTAATTCTCA
ACCAGGAAATTCTGGAAACGAGACCAGGATCTTAATGAGAAAAAACATCG
ATTTCCATAACAACAGACCTGGTAGCGATTTTGAAAAGATGTTTGAACAA
GCTCAATCATTTGCAAAATCCAAAGCTCATCAAATGGTTGATGGTAACCA
CATTGCTGGCAAGAAAGTTTTGATCTCATCTTCGTATTTCATCAAAGAGA
ACGAAAACGACAAAAGACATGACCAATATCACCTAGAGCCTTTAATTGGG
CTTCTAGCTGCATTAAGTGATGTCTTTGGTCCTGAAAATACACACTTCAT
TGAGTTCGATTCTCAATCCAGAACAAGACCTCCATCTGCAAGTTCTAGAA
AGCGTCCACGAAGTAATGGTGCAAACCAATCTAATTCTCAACCAGGAAAT
TCTGGAAACGAGACCAGGATCTTAATGAGAAAAAACATCGATTTCCATAA
CAACAGACCTGGTAGCGATTTTGAAAAGATGTTTGAACAAGCTCAATCAT
TTGCAAAATCCAAAGCTCATCAAATGGCAATCTTGAAACATGCTAAGAGT
CGACGAACACCACCAGACGAGCCGTTTCAAAATTTCAATAATTTCAACAA
AAAGCAACCCAATACTTTTGGAAGTGATTTGCTGTCACCTATCCTCTATG
CATCTTCAGCAATCTTGAAACATGCTAAGAGTCGACGAACACCACCAGAC
GAGCCGTTTCAAAATTTCAATAATTTCAACAAAAAGCAACCCAATACTTT
TGGAAGTGATTTGCTGTCACCTATCCTCTATGCATCTTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_028434XLOC_028434-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019_pilongenomesc0000019_pilon:648631..650737 -
Properties
Property NameValue
Aaloc664-795:133
Aaloc274-663:992
Aaloc160-273:1308
Aaloc1-159:2108