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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:207680..209578+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_028322 ID=XLOC_028322|Name=XLOC_028322|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1899bp|location=Sequence derived from alignment at sc0000348_pilon:207680..209578+ (Clytia hemisphaerica_ch_hm2_pilon)
GACATGTCACCGATACAACCACGAGCAATGGAAGAAGAAGGGACGAAGGA
TAGTGAGGTGATTGATGAGAGCGATATCGACTTCAATGTTATCCCGACAG
GTGTCAGCAAGAAGTTCTCGGGCAACCCACAACCTCCACAGACATCCTCA
TCATACACCGCCTTCCCCACCACAACCATCGCAACCATCCCACTATCAAC
CAGCTCCAAAATCATCCGCGTTCCTGTCTCTAGCGGTGATCGCCGCTTCT
TCGCGGGCAAAAATCTCTTAGAGTTATCGAAATCAAAACTATCTGAAAGT
CAGCTCATGAACAGTGCGCGTAAAGTGGGCGTTGCGTTCCAACAAGTGAA
GAGTGCCGCTGAAACCAGGCATCTAGATGCTGCATCAACTGGAGCCTTAG
ACAGCAACAAACTTCGTTTTGAACCGCTTCATTTACCGACAAGCCGCACC
AGTCGTCCACCAACTGCCACTTTAGGCTCGTTAAGTGAAAGTGGGAAGAT
ACTGTTGGAAGAGCACGCTAGAAGCACCATCCTTGCAAAACCGACAGTGG
TAAGTTCAAAGACAGCAGCAATGATCGCTCGTACCGCTTTCATGAGTGAC
ACCAAACTCTCCGCTAAACCCGCTGGTATCTCTTTCAGCTCTTTGAATAA
GAATCTGATCACAACAAAACCGACTACACCTGCATTGTTCTCGGGTGGGA
ATAAGACAACTGCGCATGTCTTAAGTACACCTGCTGCTACCATTCGTACG
GCGACCACAAGTAAAGTTCTTCCTGTCACCATCAAGTCTAATGACTTTAT
TCGCATGTCATCACAAGTTCGCGCTGTCCAACCCAATCAAACCAAAACCA
TACCtgccaaaatcatcaaaaaagagATCACAACCAAGATCGAAATGAAG
CCGAAAGCACCCAAGAAACCAGTGGAAGTCAAAATACCTAAGGAAGAGCC
TCCAAAAGAAGAACCACCACCTTATATCACACGAAGCGGCCGCGTGTTGC
GTACGCGGGTGCCTTATGCGGACGAACTTGACCGCAAGCCGTCTCCTCGA
AAACGACGAAGAACAAGTTCCACCAGTAAAGACGAAGGTCAACCTCCCTC
CCCTGTACCGACACCGCCGGCTATGGGAAACATCGGCAGTTCTCTTGACA
GCCTTTTAGAAGCAGCCAAGTTGATCACCACTGGGGATACAGTCCTTCAG
AATCCACCCGAAGTCGCCACACCCACTGCCACCCATCTCTCGCATATCGA
CTCCACAACAAATATGGCAGCAACAGCTATGCTAGAATTACTTGCCAGTA
ACGCGACCGTCCTTCCTCAAGTTCCTTTACAAGTCGAGAATAGTCAACTA
TCTATTGTAGATACGGCTTGTTCGACTGAAGAATCTTTACCATCGATAGC
TACAGAAACCCAACAGCCACAAATCCCTGGAGAAATTCTCCAACAACAAT
CTATAGATCAGCTTTTCCAACAGCAAATCATCCATCAAGCACCAGAGATA
CAAATTCCTCTCACTGAGCAAACAGTCTCCAATGTTGCTGATCCGATACC
CGCGACTGAGGATGTTATACTCGAGCCTGACGTGCAACCAACTAGACTGG
ACACCGAAACGATCTCAGAAATAAGCACAGAACCAATTACTGAAATGATA
ATAACACCCTCTATTACAGCGCAACATATTCAAGTTATGGAAGAGCCTGT
AGCGGAAATCGCATCCTCTAATGTTGAAACATCTATTCTCAACACGCCCA
TTAGTGATTGTAGTACACCTTCTACCGCCCAGGCGGTTGTTGGGAATCTG
TCTCAAATGGAGGAAGCAATAAAGACTTCTGAACCAAATAATGTTGATAA
AAATGCTGAAGCTGAGAACACTCACCAACCTCTTATACAAGAGGaataa Coding sequence (CDS) from alignment at sc0000348_pilon:207680..209578+ >XLOC_028322 ID=XLOC_028322|Name=XLOC_028322|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3798bp|location=Sequence derived from alignment at sc0000348_pilon:207680..209578+ (Clytia hemisphaerica_ch_hm2_pilon)
GACATGTCACCGATACAACCACGAGCAATGGAAGAAGAAGGGACGAAGGA
TAGTGAGGTGATTGATGAGAGCGATATCGACTTCAATGTTATCCCGACAG
GTGTCAGCAAGAAGTTCTCGGGCAACCCACAACCTCCACAGACATCCTCA
TCATACACCGCCTTCCCCACCACAACCATCGCAACCATCCCACTATCAAC
CAGCTCCAAAATCATCCGCGTTCCTGTCTCTAGCGGTGATCGCCGCTTCT
TCGCGGGCAAAAATCTCTTAGAGTTATCGAAATCAAAACTATCTGAAAGT
CAGCTCATGAACAGTGCGCGTAAAGTGGGCGTTGCGTTCCAACAAGTGAA
GAGTGCCGCTGAAACCAGGCATCTAGATGCTGCATCAACTGGAGCCTTAG
ACAGCAACAAACTTCGTTTTGAACCGCTTCATTTACCGACAAGCCGCACC
AGTCGTCCACCAACTGCCACTTTAGGCTCGTTAAGTGAAAGTGGGAAGAT
ACTGTTGGAAGAGCACGCTAGAAGCACCATCCTTGCAAAACCGACAGTGG
TAAGTTCAAAGACAGCAGCAATGATCGCTCGTACCGCTTTCATGAGTGAC
ACCAAACTCTCCGCTAAACCCGCTGGTATCTCTTTCAGCTCTTTGAATAA
GAATCTGATCACAACAAAACCGACTACACCTGCATTGTTCTCGGGTGGGA
ATAAGACAACTGCGCATGTCTTAAGTACACCTGCTGCTACCATTCGTACG
GCGACCACAAGTAAAGTTCTTCCTGTCACCATCAAGTCTAATGACTTTAT
TCGCATGTCATCACAAGTTCGCGCTGTCCAACCCAATCAAACCAAAACCA
TACCtgccaaaatcatcaaaaaagagATCACAACCAAGATCGAAATGAAG
CCGAAAGCACCCAAGAAACCAGTGGAAGTCAAAATACCTAAGGAAGAGCC
TCCAAAAGAAGAACCACCACCTTATATCACACGAAGCGGCCGCGTGTTGC
GTACGCGGGTGCCTTATGCGGACGAACTTGACCGCAAGCCGTCTCCTCGA
AAACGACGAAGAACAAGTTCCACCAGTAAAGACGAAGGTCAACCTCCCTC
CCCTGTACCGACACCGCCGGCTATGGGAAACATCGGCAGTTCTCTTGACA
GCCTTTTAGAAGCAGCCAAGTTGATCACCACTGGGGATACAGTCCTTCAG
AATCCACCCGAAGTCGCCACACCCACTGCCACCCATCTCTCGCATATCGA
CTCCACAACAAATATGGCAGCAACAGCTATGCTAGAATTACTTGCCAGTA
ACGCGACCGTCCTTCCTCAAGTTCCTTTACAAGTCGAGAATAGTCAACTA
TCTATTGTAGATACGGCTTGTTCGACTGAAGAATCTTTACCATCGATAGC
TACAGAAACCCAACAGCCACAAATCCCTGGAGAAATTCTCCAACAACAAT
CTATAGATCAGCTTTTCCAACAGCAAATCATCCATCAAGCACCAGAGATA
CAAATTCCTCTCACTGAGCAAACAGTCTCCAATGTTGCTGATCCGATACC
CGCGACTGAGGATGTTATACTCGAGCCTGACGTGCAACCAACTAGACTGG
ACACCGAAACGATCTCAGAAATAAGCACAGAACCAATTACTGAAATGATA
ATAACACCCTCTATTACAGCGCAACATATTCAAGTTATGGAAGAGCCTGT
AGCGGAAATCGCATCCTCTAATGTTGAAACATCTATTCTCAACACGCCCA
TTAGTGATTGTAGTACACCTTCTACCGCCCAGGCGGTTGTTGGGAATCTG
TCTCAAATGGAGGAAGCAATAAAGACTTCTGAACCAAATAATGTTGATAA
AAATGCTGAAGCTGAGAACACTCACCAACCTCTTATACAAGAGGaataaG
ACATGTCACCGATACAACCACGAGCAATGGAAGAAGAAGGGACGAAGGAT
AGTGAGGTGATTGATGAGAGCGATATCGACTTCAATGTTATCCCGACAGG
TGTCAGCAAGAAGTTCTCGGGCAACCCACAACCTCCACAGACATCCTCAT
CATACACCGCCTTCCCCACCACAACCATCGCAACCATCCCACTATCAACC
AGCTCCAAAATCATCCGCGTTCCTGTCTCTAGCGGTGATCGCCGCTTCTT
CGCGGGCAAAAATCTCTTAGAGTTATCGAAATCAAAACTATCTGAAAGTC
AGCTCATGAACAGTGCGCGTAAAGTGGGCGTTGCGTTCCAACAAGTGAAG
AGTGCCGCTGAAACCAGGCATCTAGATGCTGCATCAACTGGAGCCTTAGA
CAGCAACAAACTTCGTTTTGAACCGCTTCATTTACCGACAAGCCGCACCA
GTCGTCCACCAACTGCCACTTTAGGCTCGTTAAGTGAAAGTGGGAAGATA
CTGTTGGAAGAGCACGCTAGAAGCACCATCCTTGCAAAACCGACAGTGGT
AAGTTCAAAGACAGCAGCAATGATCGCTCGTACCGCTTTCATGAGTGACA
CCAAACTCTCCGCTAAACCCGCTGGTATCTCTTTCAGCTCTTTGAATAAG
AATCTGATCACAACAAAACCGACTACACCTGCATTGTTCTCGGGTGGGAA
TAAGACAACTGCGCATGTCTTAAGTACACCTGCTGCTACCATTCGTACGG
CGACCACAAGTAAAGTTCTTCCTGTCACCATCAAGTCTAATGACTTTATT
CGCATGTCATCACAAGTTCGCGCTGTCCAACCCAATCAAACCAAAACCAT
ACCtgccaaaatcatcaaaaaagagATCACAACCAAGATCGAAATGAAGC
CGAAAGCACCCAAGAAACCAGTGGAAGTCAAAATACCTAAGGAAGAGCCT
CCAAAAGAAGAACCACCACCTTATATCACACGAAGCGGCCGCGTGTTGCG
TACGCGGGTGCCTTATGCGGACGAACTTGACCGCAAGCCGTCTCCTCGAA
AACGACGAAGAACAAGTTCCACCAGTAAAGACGAAGGTCAACCTCCCTCC
CCTGTACCGACACCGCCGGCTATGGGAAACATCGGCAGTTCTCTTGACAG
CCTTTTAGAAGCAGCCAAGTTGATCACCACTGGGGATACAGTCCTTCAGA
ATCCACCCGAAGTCGCCACACCCACTGCCACCCATCTCTCGCATATCGAC
TCCACAACAAATATGGCAGCAACAGCTATGCTAGAATTACTTGCCAGTAA
CGCGACCGTCCTTCCTCAAGTTCCTTTACAAGTCGAGAATAGTCAACTAT
CTATTGTAGATACGGCTTGTTCGACTGAAGAATCTTTACCATCGATAGCT
ACAGAAACCCAACAGCCACAAATCCCTGGAGAAATTCTCCAACAACAATC
TATAGATCAGCTTTTCCAACAGCAAATCATCCATCAAGCACCAGAGATAC
AAATTCCTCTCACTGAGCAAACAGTCTCCAATGTTGCTGATCCGATACCC
GCGACTGAGGATGTTATACTCGAGCCTGACGTGCAACCAACTAGACTGGA
CACCGAAACGATCTCAGAAATAAGCACAGAACCAATTACTGAAATGATAA
TAACACCCTCTATTACAGCGCAACATATTCAAGTTATGGAAGAGCCTGTA
GCGGAAATCGCATCCTCTAATGTTGAAACATCTATTCTCAACACGCCCAT
TAGTGATTGTAGTACACCTTCTACCGCCCAGGCGGTTGTTGGGAATCTGT
CTCAAATGGAGGAAGCAATAAAGACTTCTGAACCAAATAATGTTGATAAA
AATGCTGAAGCTGAGAACACTCACCAACCTCTTATACAAGAGGaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:207680..209578 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1899:1 |
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