XLOC_028283 (mRNA) -

Overview
NameXLOC_028283
Unique NameXLOC_028283
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000159_pilon:479224..479975+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028283 ID=XLOC_028283|Name=XLOC_028283|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=752bp|location=Sequence derived from alignment at sc0000159_pilon:479224..479975+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGTTTCTCTTGATGCTACTTGGTATGAAGCAGGCAACCTCCAACAATGC ATGCATATACTGCGACATTAACAAGAATGACCGGTAAGTGTGCAACCTAA AATGtaagattattattattattattattattattataacaaATGCAAAA TAATGTAGTTAAACTCTGAGAGAGCCACAAGTACTAAAAAGATTACACAA TATCACCAAGGATAATTTATATAAAACTCTTAGCTTTAAAATATCTCAAC ACTATACAAATCTTAAATCAATTTTTAGCCAAGATCCTTCAAAGTCAGGa aaaaaaCGAACCATCAATGCAAAATGGAGCAAGCAGCCAGGATGCAAGGA TGACCCAATCTTCTCAGATGTCCCGATTGATCATTATTGCGTTGATGAGC TGCATCTTTTGCTGAGGGTCACAGACCGGTTGGAGGATGGAATGTTCCAT ACCATTATTGATATCGATGAAGTAAGTGGACTTCCTGAAATTAGAGttat aaaatgtttcaaattattACTACTGATTGAAATTCACATCGTAGATAGGG ATTTAGGCTAGGTATATTTATCACAAATCAAAACTTATCCCTAATAATTT CTCTTTAGAAAAATGGAAACAATGATATGCAATCAAAACTTGTGTCTGCA ATGAAATCAATCGGcatcactttgaaattttggagagacaagaaaaataa attggaGTGGACATCATTAATGGGTAGTGATAAGAagagaatgttgaaaa ag

Coding sequence (CDS) from alignment at sc0000159_pilon:479224..479975+

>XLOC_028283 ID=XLOC_028283|Name=XLOC_028283|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=840bp|location=Sequence derived from alignment at sc0000159_pilon:479224..479975+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGTTTCTCTTGATGCTACTTGGTATGAAGCAGGCAACCTCCAACAATGC
ATGCATATACTGCGACATTAACAAGAATGACCGCAGTTTCTCTTGATGCT
ACTTGGTATGAAGCAGGCAACCTCCAACAATGCATGCATATACTGCGACA
TTAACAAGAATGACCGCCAAGATCCTTCAAAGTCAGGaaaaaaaCGAACC
ATCAATGCAAAATGGAGCAAGCAGCCAGGATGCAAGGATGACCCAATCTT
CTCAGATGTCCCGATTGATCATTATTGCGTTGATGAGCTGCATCTTTTGC
TGAGGGTCACAGACCGGTTGGAGGATGGAATGTTCCATACCATTATTGAT
ATCGATGAACCAAGATCCTTCAAAGTCAGGaaaaaaaCGAACCATCAATG
CAAAATGGAGCAAGCAGCCAGGATGCAAGGATGACCCAATCTTCTCAGAT
GTCCCGATTGATCATTATTGCGTTGATGAGCTGCATCTTTTGCTGAGGGT
CACAGACCGGTTGGAGGATGGAATGTTCCATACCATTATTGATATCGATG
AAAAAAATGGAAACAATGATATGCAATCAAAACTTGTGTCTGCAATGAAA
TCAATCGGcatcactttgaaattttggagagacaagaaaaataaattgga
GTGGACATCATTAATGGGTAGTGATAAGAagagaatgttgaaaaagAAAA
ATGGAAACAATGATATGCAATCAAAACTTGTGTCTGCAATGAAATCAATC
GGcatcactttgaaattttggagagacaagaaaaataaattggaGTGGAC
ATCATTAATGGGTAGTGATAAGAagagaatgttgaaaaag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_028283XLOC_028283-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000159_pilongenomesc0000159_pilon:479224..479975 +
Properties
Property NameValue
Aaloc277-420:609
Aaloc85-276:280
Aaloc1-81:1