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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000289_pilon:407184..409568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_028273 ID=XLOC_028273|Name=XLOC_028273|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2385bp|location=Sequence derived from alignment at sc0000289_pilon:407184..409568+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAGGAAGACTTTTTAATTGATTTAGACACTGCATTGAGTGTTGc
gcattttcaaaattcaagcagAACAACTGCTGGACGTACCTTTTCTTGCG
CTGTTgattgttttcttgaaatatgttaCCGCTTGCTTCTTCCAGAAATT
AAAGATAAGATGTTGTTTGAAGAATCAAGTGAATTTTTTACTTTGCTTCA
AATAAGTGGGTCAATGGAAATTccatttgaaaataataataacattaaAA
GTAATGCTTTTCGACTGCTGGATGAAATTAGAGAACCGTTATGGTCAAGA
ATCATTGGGAATTGTGATACATTTAAGAAAAGAGATTGTAACGCAGAGTT
CCAAGAGATTTTTGGAAGTgacattttcaagaaattgtCAGAAGGAGAGA
GACACATTTTTGAAGCGAGCTTTGTAGTTCAAGGTATTTGTAATACTTGT
GGTAGTGAAAAAGAACGTAGAGAAACAGGTAACATTGTTAGTATCCTTTC
AGAAATTATGTATCCAGAGATTATGATTGATGCAAGTTCATGGCCGAACT
GTTTATTGACTTCTCTTATTAATCCAAGCTCAGTAATAAATTGCAATACT
TGCTCTGTCAATATACCGGCACAGGTTCAAGCTGTTGATCTTCCAAGTTT
TCTCTTGATAGAATTTTCTACTCCATTATGCATAAACAATTGCAGATTTT
TTGAGCAGATTTTAGTGAAAGAAACTAACTATAAATTACATGCCATTGTA
AGGAATTGTGGTGCCCATTTTGCTTGTGGTatatttattgaaaataaatg
gGTTTACATTGATGATTTGAATCctgacaaaatattttatcaaaacatta
atgaaatgttttcaaaaaacaatggaGGATGGTTCTTTGCGTTTTATAGA
AAAGCTTCCGAAATGATTGATTTTGTTATAGGCACCACGGCTATtcaaga
aaattatttaaaggacgaaaaaactcataacattattccaaaaaatgagc
ccaaaaaaGAATATCCTAATCGGAAGAGAAACATAATTAACTATGAAGGT
CTTTGTAGCAAAAGTAATAAGaaaattaaacttgacaatttatttcaaag
tattgacaaaaaggtaaaaaatttgaaacgaaaaGCCAATTATGAGCCTG
CTAAGCGAAAAGCATATTATGAACCTGAAAAGCGAAAATCCTATTATGAC
CCTGAAATGCAAAAATCATATTATGACTCTGAAAAGCGAAAAGCATCTTA
TGACCCTGaaaagcgaaaagcattttatgactctgaaaaggaaaaagcat
attatgaccctgaaaaacaaaaagcgtcttatgatcctgaaaaacgaaaa
GCGTCTTATGACCCTGAAAAGCAGAAAGCGTCTTATGACCCTGAAAAGCA
AAAAGCATCTTATAACCCTGATAAGCgaaaagctgactatgagaaagaaa
agaaaaagccaatttacaattcacaaaagcgaaaagaaaaatatgatcca
aaacaacgaagagaaaggtacaattcgctaaaacaaaataaaaattcgaa
aacccaacaaaaagaaacggagcttaatggaaatataaaagattttcaga
aatcCATGAAGTTCTCAATAACTCAATGTCAAACATGTTTTGAATCCTGG
CCGataaaaattacgtcaaaagTAAACTCAGTCAATGATTTCATTTGTAC
GCGTTGCAAAAGAGACAAAGGAACTCCaaaaaaaTTCAGTGCGGATAATA
ATATGAAACCAAGTCCCGTGCCAGAAGCATTGAAAGGTCTCACGCAAGTT
GAAGAAATGCTAATAGCTAGAGCTTTTCCAGTAATGCAAGTGTACACCCG
ACCAAGAGGGGGTCAGAGAGCTTATAAAGGTCACGTTTTAAATTTGCCTC
ATAATGTTCAAAAAATTGCAGATGTCCTACCACGAGAGCCCAGCGACATT
CCtgtaatgatttttaaaataaatgggaaaaataatacCTCAAAAGAACT
TGTCGTTAGACGTGAAAAGATTTTACAGGCATTATTATGGCTGACAGGAA
AAAATGAACAAGGTGAACCTAATAATTTTCTATATAGTGAAATCAATATA
GATATGGAAAGGCTACAAAAGCTGCCTGAAAATGGATTCATTGACTTACC
AGACTTGCACATAATGAATGAGAAAAATGATATTGAGAGCGgtgaagaaa
atgaaagtgacaacgaaaatgaagatgtcagtgaaaatgaagaattacCA
GATTTAGGTCCAGTTAATGATGATAACAATGAACgtgtttttgatgaaaa
cactgaaatgaaaagtttcttaCCATCTAAACTAAATAAAGCAAAGGAAG
CTGACTtaacaaaaagtgaaattttgaataCAAAA Coding sequence (CDS) from alignment at sc0000289_pilon:407184..409568+ >XLOC_028273 ID=XLOC_028273|Name=XLOC_028273|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4770bp|location=Sequence derived from alignment at sc0000289_pilon:407184..409568+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAGGAAGACTTTTTAATTGATTTAGACACTGCATTGAGTGTTGc
gcattttcaaaattcaagcagAACAACTGCTGGACGTACCTTTTCTTGCG
CTGTTgattgttttcttgaaatatgttaCCGCTTGCTTCTTCCAGAAATT
AAAGATAAGATGTTGTTTGAAGAATCAAGTGAATTTTTTACTTTGCTTCA
AATAAGTGGGTCAATGGAAATTccatttgaaaataataataacattaaAA
GTAATGCTTTTCGACTGCTGGATGAAATTAGAGAACCGTTATGGTCAAGA
ATCATTGGGAATTGTGATACATTTAAGAAAAGAGATTGTAACGCAGAGTT
CCAAGAGATTTTTGGAAGTgacattttcaagaaattgtCAGAAGGAGAGA
GACACATTTTTGAAGCGAGCTTTGTAGTTCAAGGTATTTGTAATACTTGT
GGTAGTGAAAAAGAACGTAGAGAAACAGGTAACATTGTTAGTATCCTTTC
AGAAATTATGTATCCAGAGATTATGATTGATGCAAGTTCATGGCCGAACT
GTTTATTGACTTCTCTTATTAATCCAAGCTCAGTAATAAATTGCAATACT
TGCTCTGTCAATATACCGGCACAGGTTCAAGCTGTTGATCTTCCAAGTTT
TCTCTTGATAGAATTTTCTACTCCATTATGCATAAACAATTGCAGATTTT
TTGAGCAGATTTTAGTGAAAGAAACTAACTATAAATTACATGCCATTGTA
AGGAATTGTGGTGCCCATTTTGCTTGTGGTatatttattgaaaataaatg
gGTTTACATTGATGATTTGAATCctgacaaaatattttatcaaaacatta
atgaaatgttttcaaaaaacaatggaGGATGGTTCTTTGCGTTTTATAGA
AAAGCTTCCGAAATGATTGATTTTGTTATAGGCACCACGGCTATtcaaga
aaattatttaaaggacgaaaaaactcataacattattccaaaaaatgagc
ccaaaaaaGAATATCCTAATCGGAAGAGAAACATAATTAACTATGAAGGT
CTTTGTAGCAAAAGTAATAAGaaaattaaacttgacaatttatttcaaag
tattgacaaaaaggtaaaaaatttgaaacgaaaaGCCAATTATGAGCCTG
CTAAGCGAAAAGCATATTATGAACCTGAAAAGCGAAAATCCTATTATGAC
CCTGAAATGCAAAAATCATATTATGACTCTGAAAAGCGAAAAGCATCTTA
TGACCCTGaaaagcgaaaagcattttatgactctgaaaaggaaaaagcat
attatgaccctgaaaaacaaaaagcgtcttatgatcctgaaaaacgaaaa
GCGTCTTATGACCCTGAAAAGCAGAAAGCGTCTTATGACCCTGAAAAGCA
AAAAGCATCTTATAACCCTGATAAGCgaaaagctgactatgagaaagaaa
agaaaaagccaatttacaattcacaaaagcgaaaagaaaaatatgatcca
aaacaacgaagagaaaggtacaattcgctaaaacaaaataaaaattcgaa
aacccaacaaaaagaaacggagcttaatggaaatataaaagattttcaga
aatcCATGAAGTTCTCAATAACTCAATGTCAAACATGTTTTGAATCCTGG
CCGataaaaattacgtcaaaagTAAACTCAGTCAATGATTTCATTTGTAC
GCGTTGCAAAAGAGACAAAGGAACTCCaaaaaaaTTCAGTGCGGATAATA
ATATGAAACCAAGTCCCGTGCCAGAAGCATTGAAAGGTCTCACGCAAGTT
GAAGAAATGCTAATAGCTAGAGCTTTTCCAGTAATGCAAGTGTACACCCG
ACCAAGAGGGGGTCAGAGAGCTTATAAAGGTCACGTTTTAAATTTGCCTC
ATAATGTTCAAAAAATTGCAGATGTCCTACCACGAGAGCCCAGCGACATT
CCtgtaatgatttttaaaataaatgggaaaaataatacCTCAAAAGAACT
TGTCGTTAGACGTGAAAAGATTTTACAGGCATTATTATGGCTGACAGGAA
AAAATGAACAAGGTGAACCTAATAATTTTCTATATAGTGAAATCAATATA
GATATGGAAAGGCTACAAAAGCTGCCTGAAAATGGATTCATTGACTTACC
AGACTTGCACATAATGAATGAGAAAAATGATATTGAGAGCGgtgaagaaa
atgaaagtgacaacgaaaatgaagatgtcagtgaaaatgaagaattacCA
GATTTAGGTCCAGTTAATGATGATAACAATGAACgtgtttttgatgaaaa
cactgaaatgaaaagtttcttaCCATCTAAACTAAATAAAGCAAAGGAAG
CTGACTtaacaaaaagtgaaattttgaataCAAAAATGGAAGAGGAAGAC
TTTTTAATTGATTTAGACACTGCATTGAGTGTTGcgcattttcaaaattc
aagcagAACAACTGCTGGACGTACCTTTTCTTGCGCTGTTgattgttttc
ttgaaatatgttaCCGCTTGCTTCTTCCAGAAATTAAAGATAAGATGTTG
TTTGAAGAATCAAGTGAATTTTTTACTTTGCTTCAAATAAGTGGGTCAAT
GGAAATTccatttgaaaataataataacattaaAAGTAATGCTTTTCGAC
TGCTGGATGAAATTAGAGAACCGTTATGGTCAAGAATCATTGGGAATTGT
GATACATTTAAGAAAAGAGATTGTAACGCAGAGTTCCAAGAGATTTTTGG
AAGTgacattttcaagaaattgtCAGAAGGAGAGAGACACATTTTTGAAG
CGAGCTTTGTAGTTCAAGGTATTTGTAATACTTGTGGTAGTGAAAAAGAA
CGTAGAGAAACAGGTAACATTGTTAGTATCCTTTCAGAAATTATGTATCC
AGAGATTATGATTGATGCAAGTTCATGGCCGAACTGTTTATTGACTTCTC
TTATTAATCCAAGCTCAGTAATAAATTGCAATACTTGCTCTGTCAATATA
CCGGCACAGGTTCAAGCTGTTGATCTTCCAAGTTTTCTCTTGATAGAATT
TTCTACTCCATTATGCATAAACAATTGCAGATTTTTTGAGCAGATTTTAG
TGAAAGAAACTAACTATAAATTACATGCCATTGTAAGGAATTGTGGTGCC
CATTTTGCTTGTGGTatatttattgaaaataaatggGTTTACATTGATGA
TTTGAATCctgacaaaatattttatcaaaacattaatgaaatgttttcaa
aaaacaatggaGGATGGTTCTTTGCGTTTTATAGAAAAGCTTCCGAAATG
ATTGATTTTGTTATAGGCACCACGGCTATtcaagaaaattatttaaagga
cgaaaaaactcataacattattccaaaaaatgagcccaaaaaaGAATATC
CTAATCGGAAGAGAAACATAATTAACTATGAAGGTCTTTGTAGCAAAAGT
AATAAGaaaattaaacttgacaatttatttcaaagtattgacaaaaaggt
aaaaaatttgaaacgaaaaGCCAATTATGAGCCTGCTAAGCGAAAAGCAT
ATTATGAACCTGAAAAGCGAAAATCCTATTATGACCCTGAAATGCAAAAA
TCATATTATGACTCTGAAAAGCGAAAAGCATCTTATGACCCTGaaaagcg
aaaagcattttatgactctgaaaaggaaaaagcatattatgaccctgaaa
aacaaaaagcgtcttatgatcctgaaaaacgaaaaGCGTCTTATGACCCT
GAAAAGCAGAAAGCGTCTTATGACCCTGAAAAGCAAAAAGCATCTTATAA
CCCTGATAAGCgaaaagctgactatgagaaagaaaagaaaaagccaattt
acaattcacaaaagcgaaaagaaaaatatgatccaaaacaacgaagagaa
aggtacaattcgctaaaacaaaataaaaattcgaaaacccaacaaaaaga
aacggagcttaatggaaatataaaagattttcagaaatcCATGAAGTTCT
CAATAACTCAATGTCAAACATGTTTTGAATCCTGGCCGataaaaattacg
tcaaaagTAAACTCAGTCAATGATTTCATTTGTACGCGTTGCAAAAGAGA
CAAAGGAACTCCaaaaaaaTTCAGTGCGGATAATAATATGAAACCAAGTC
CCGTGCCAGAAGCATTGAAAGGTCTCACGCAAGTTGAAGAAATGCTAATA
GCTAGAGCTTTTCCAGTAATGCAAGTGTACACCCGACCAAGAGGGGGTCA
GAGAGCTTATAAAGGTCACGTTTTAAATTTGCCTCATAATGTTCAAAAAA
TTGCAGATGTCCTACCACGAGAGCCCAGCGACATTCCtgtaatgattttt
aaaataaatgggaaaaataatacCTCAAAAGAACTTGTCGTTAGACGTGA
AAAGATTTTACAGGCATTATTATGGCTGACAGGAAAAAATGAACAAGGTG
AACCTAATAATTTTCTATATAGTGAAATCAATATAGATATGGAAAGGCTA
CAAAAGCTGCCTGAAAATGGATTCATTGACTTACCAGACTTGCACATAAT
GAATGAGAAAAATGATATTGAGAGCGgtgaagaaaatgaaagtgacaacg
aaaatgaagatgtcagtgaaaatgaagaattacCAGATTTAGGTCCAGTT
AATGATGATAACAATGAACgtgtttttgatgaaaacactgaaatgaaaag
tttcttaCCATCTAAACTAAATAAAGCAAAGGAAGCTGACTtaacaaaaa
gtgaaattttgaataCAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000289_pilon | genome | sc0000289_pilon:407184..409568 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2167-2388:2164 |
| Aaloc | 1-2163:1 |
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