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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1630718..1634292+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_028201 ID=XLOC_028201|Name=XLOC_028201|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3575bp|location=Sequence derived from alignment at sc0000049_pilon:1630718..1634292+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTCTAGTGATTGCGAT
GAAATCTTGGATTAAAATCACGAAAGCAGATGAAATTGATGAGGAAGAAA
GGTTAGTGTCTTTATTACTGTAAAGAAAGATTTAGTCTAGGAGAGTTTCC
CCAATATTTTCACTATTGACTATCTTACAGTGGTAGATCAACTGAAACGC
TTGAGTTAGTGAAACTCTAAATTCCGTGACTATTTTCAAGAAGAAATCAT
AAataatttccttttttcacctgTTAGTTTTGGTAAAATTTTGTTGAGAA
GATCtttcataacaaaaataatgtttttgctttttttttcatcagatTTG
GTGGTTCCTCTACAGAAGAAACAGATGACGGCTTATTAGCAGTATTGAAA
GAATGCAAAAATGTCAACCTGGTTGACCAGAATGGAATGTCTGCTGCACA
TCACGCATCGCTTAAGAAAAAGCCTTGTAAGTTTTCCTATACATCGTTAA
AAGCTTCCAGATTTATCAATTGAACTCTAGacattttcaaaacaccaaaa
agTAAGCAAttttaaaagatacgtcacgcATCTGATCATAGATCTACCGT
ATATGATATCCCCTTCAGCAGCATTGATATCATAAGGACAAAGTTCCAGA
TATGCTTAGATATTCAGTTTCCATCATtactttaaccctattattatcag
gctttttcgggttttgtattctcaagggtcACCCCccggtgttttccacc
agccttgcataacttttgatctagaaaagatttggacttgaaacttggca
gaaatgttttctaccataaaaggagttaatagaaaaaaatttgggttgat
gacgccATCATgaagctgatgacgtcatcacaaagtttcacaattatcgc
tgaccaatgaaaaagtactattcaataaattagcaattaaagttgaacga
atggagattttgcaagcctgttttgaatttctaaaagcaaaaaagaataC
CTTTAACAtaatttgccggtttttaacatactaataaaattagggttata
ttaaaagtcagaaactttcagagtgttacaaaacattttcaatgagctta
ttagcaaaagagtgccagcctggtggaaccccccccctgataaaaatagg
gttaaggaataatcagatggtttgtacAATTTTGCATGTGGgatccttct
attgtcctgagcaaaattcttaaaatatttttacctaactattttccaaa
ggttagatatttaagttacaagtgtttggcttttaggatgaaaacaatag
aatttgaaCGTAAGAAACGTGTAAGAACAAGAACCCATttgcaaaaatat
caaatttggaaaattgttacacaaTTAAATACTTTGAAGTTTTACTAAGG
ACCACAGAAGATTTCtgtaatctaaatatctcaaaccatctgattatccc
tttaaagacTCCAGAATCTTTTATCAATTGGATCTTGAACATTTTTCGAG
ATACCGAAAAGTTTGCAAATTGAAAGAAAGTCAATCTATAAATGAATCTT
CATATTTTCTTATAGCTGTCAGCAAGAAAATTGCTATTTTCAAACGTCTC
TTGAAAGCTGGTCTCGATGTGAACGCGCAAGATGACAAAAATGGTCGCAC
AGTGTTACACAATCTAGTAATGCTGGCATCAGGTGATTATGAAACAACCA
ATGAACTTGAAATATTGCTGATATCTCATGGTGCACTATTAGATGTTGAG
TGTTCGCGCGGCCGCTTCCCGATTCATTACGCATTCTTTGACAAATCAAA
CAGGTAAGGGGGTAATTGctttttattataaacataCTTTCGTGTTTACG
TACGTGTTTCACAAAGCCGATTTTTCGTAAAAGTAAACTTTTTATAAGGC
TGGTGTCATTTGATGGTCCTGTATGATCCCTTATATACATTTAAACGCTA
AGAATCGATATAATGGAAAAAAGCGGGTAGAGGAAATTTCGTTTCGAATA
GTGCCCGACGTTTTTGACATTTGTCTGCTTGGTCAAATAATTAATAtata
aagttcttccgtctcagtcagacggatttccgtttCCAGGAAGATACAAA
TAAGGCTTCTCTTTCTTCAAGCTCCACAAAATTatgcaaagttttaaaaa
ttgttgtttAAAGTCCGATTTCCAGCCTGGGTCaaaaaaaTGTGCTTTTA
CCACTATATAATCAAAGCGATGCGAAGCTTTGGATATTTTTCAAAGAAGT
ATTCTACTTGGTTGATTCTTGATTTTATTTCAGCAAGAAATTGGACTCGA
CAAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGTACTGAATAC
AACCAATCTAAATTCAACATGAAAGATTACGTCAGTCATCAAGACAATGA
GGGGAATACGCCGCTGCATTATGGGTGCCAACGTGGTGCGACTATCTCAT
GCATGCAGttgaaaaaggtatttttgagaaattgtgGAGTAGGTAGGCCG
GTTGGCGGACGGGGttattcaacaaaattttaagaatgtgTTCGTCAATT
TTTTGCGTAAAattccgtctcagacgaaaaatgttgttttgactACTGGT
GATGATGCCTTCTGTCATTGCTCTATCAGTGGATCAGAACCTTTTCGCAC
GTTGGTCTTGACTTTTATCTTCGTGTCCCTTACAAATGGAAGACAACCCC
CGTCCCCTTGTTTTAGctagtttatgtatgtgtgttttccaGCGACTGAG
ACGGTTAGGGTTCGACTTGGCTAGATCATGACAACTGAGGACGACGCTTA
ATCAGcatttttaccgtcctcgattttgcgggtcaaaagctttaagtgga
cacTAGGCTAGTCAAAACTGAGTTtcattccaaatcgcttcagtcaatCT
GCTGTCCTCGAAAAGTGCAAATACTTAAACTCGCTAATATCTGCCACCTG
GACAGCACATGggaaattttgtttgctttttcttAGCTTGGTGCAGACGA
CAAGCTGACAGATAAGAATGGAAACACGCCTTTGGCTATTGCATTGAAAA
ACAAGCATCATGGGTAAGAATCAGTCGGAgatcaattttctaaaattgtt
ttctaTTATTAGTTTAGTATCGCCCGATTCAAAAGTCAGTTTGAtaccat
ttttgagaaaaagtcaCCCTTGCTTCTAGAACGAAAGATAAAGCGGGGGT
TCGTTTTATAAGCAAAGCTGATATTTCCAGTGCCGGGTATGTCATGCCTA
GCTTCCCAGTTAGCCTGTAGACAATATTGTGATGCAACACGACGGCTTCA
GAAAGCCCGTTCTTCATCGAGAAATATATTCCGATACTTAACTTCGCTAA
CAAGAGTGGCTTGACTATTATTTTCTTAGCACTGCTATGATGATGCTTCA
AGAGGGTGCTGACCCACAATGCAATATATACAAACGCGTAACCAAGGAAC
AGATAAAACAATACGAAGAAGGCATATCATCCAACAAATATAAATGGGAT
TATTCGGCTGAAAAACCTGAAGACTTTTTAGTTTCtgcttttgttttcgt
tttgatTCAAGACTGGAAAGATTTG Coding sequence (CDS) from alignment at sc0000049_pilon:1630718..1634292+ >XLOC_028201 ID=XLOC_028201|Name=XLOC_028201|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1854bp|location=Sequence derived from alignment at sc0000049_pilon:1630718..1634292+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTCTAGTGATTGCGAT
GAAATCTTGGATTAAAATCACGAAAGCAGATGAAATTGATGAGGAAGAAA
GTCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTCTAGTGATTGCGA
TGAAATCTTGGATTAAAATCACGAAAGCAGATGAAATTGATGAGGAAGAA
AGatTTGGTGGTTCCTCTACAGAAGAAACAGATGACGGCTTATTAGCAGT
ATTGAAAGAATGCAAAAATGTCAACCTGGTTGACCAGAATGGAATGTCTG
CTGCACATCACGCATCGCTTAAGAAAAAGCCTTatTTGGTGGTTCCTCTA
CAGAAGAAACAGATGACGGCTTATTAGCAGTATTGAAAGAATGCAAAAAT
GTCAACCTGGTTGACCAGAATGGAATGTCTGCTGCACATCACGCATCGCT
TAAGAAAAAGCCTTCTGTCAGCAAGAAAATTGCTATTTTCAAACGTCTCT
TGAAAGCTGGTCTCGATGTGAACGCGCAAGATGACAAAAATGGTCGCACA
GTGTTACACAATCTAGTAATGCTGGCATCAGGTGATTATGAAACAACCAA
TGAACTTGAAATATTGCTGATATCTCATGGTGCACTATTAGATGTTGAGT
GTTCGCGCGGCCGCTTCCCGATTCATTACGCATTCTTTGACAAATCAAAC
AGCTGTCAGCAAGAAAATTGCTATTTTCAAACGTCTCTTGAAAGCTGGTC
TCGATGTGAACGCGCAAGATGACAAAAATGGTCGCACAGTGTTACACAAT
CTAGTAATGCTGGCATCAGGTGATTATGAAACAACCAATGAACTTGAAAT
ATTGCTGATATCTCATGGTGCACTATTAGATGTTGAGTGTTCGCGCGGCC
GCTTCCCGATTCATTACGCATTCTTTGACAAATCAAACAGCAAGAAATTG
GACTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGTAC
TGAATACAACCAATCTAAATTCAACATGAAAGATTACGTCAGTCATCAAG
ACAATGAGGGGAATACGCCGCTGCATTATGGGTGCCAACGTGGTGCGACT
ATCTCATGCATGCAGttgaaaaagCAAGAAATTGGACTCGACAAACATTT
GCGATCCCATGTCTCTCATTCATCTTTTGTGTACTGAATACAACCAATCT
AAATTCAACATGAAAGATTACGTCAGTCATCAAGACAATGAGGGGAATAC
GCCGCTGCATTATGGGTGCCAACGTGGTGCGACTATCTCATGCATGCAGt
tgaaaaagCTTGGTGCAGACGACAAGCTGACAGATAAGAATGGAAACACG
CCTTTGGCTATTGCATTGAAAAACAAGCATCATGGCTTGGTGCAGACGAC
AAGCTGACAGATAAGAATGGAAACACGCCTTTGGCTATTGCATTGAAAAA
CAAGCATCATGGCACTGCTATGATGATGCTTCAAGAGGGTGCTGACCCAC
AATGCAATATATACAAACGCGTAACCAAGGAACAGATAAAACAATACGAA
GAAGGCATATCATCCAACAAATATAAATGGGATTATTCGGCTGAAAAACC
TGAAGACTTTTTAGTTTCtgcttttgttttcgttttgatTCAAGACTGGA
AAGATTTGCACTGCTATGATGATGCTTCAAGAGGGTGCTGACCCACAATG
CAATATATACAAACGCGTAACCAAGGAACAGATAAAACAATACGAAGAAG
GCATATCATCCAACAAATATAAATGGGATTATTCGGCTGAAAAACCTGAA
GACTTTTTAGTTTCtgcttttgttttcgttttgatTCAAGACTGGAAAGA
TTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1630718..1634292 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 733-927:3381 |
| Aaloc | 655-729:2987 |
| Aaloc | 472-654:2285 |
| Aaloc | 235-468:1568 |
| Aaloc | 103-231:347 |
| Aaloc | 1-99:1 |
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