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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000260_pilon:416106..418177- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_028170 ID=XLOC_028170|Name=XLOC_028170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2072bp|location=Sequence derived from alignment at sc0000260_pilon:416106..418177- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATGGTAGTAGTACGCTCTCTAAAAGACATCATCTCTATAAAGATTAA
ACCAAGACATGATTCACCTTGCGATCAATTCAGTCGTATATTTATGACCA
AAATGCTACTCATAGCATCTGTCGTAATGGGGTTCCAATATTTCTCGGAC
AAAATCAATTGCCTTCAAGCTCACAAATCTGACGTTTCTAAAGACTTTGT
TCATGCTGCTTGTTGGATATCCGGGCTCTATGTTTACAAAGAAAGAAAGC
TGGTTGAAAATCAAATATATCCTGGAATTCCGTCAAATTTAAAGATGGAC
GGTTTCACATCTGAGAGTTACCATCCTTGTGATTCAACATCGGCATCAAA
TATGGGAGTTGGTATGTGCACCAAATTGACCAGAGAATATTATCTCCATT
ATCAATGGATGCCGTTCTACATTGGTGCTTTAGCTATTTTTTATTATCTC
CCATATGTCTTGTTCAGGATCATCAATGTTGATCTTATCTCCTTAAAGTC
AGTTTTGGAATCGGTTACCGGTGATGCAGACCATATCGTCCGAAATTACT
TCAACTACAAAATCAATTCCATTGGTAAATTGCGCATGCGTATCTTTTTG
AATGTCATTGTGAAATGTGCATACGTTATTGCTAACCTTTTCGGTTTCTT
TTTCACTGATTATCTCCTTAATGGTAATTATCGGAATTACGGATTCGACT
ATATGGATTGGGCACGCGATAGCACAGATGAAAACCATATTGGGTTGAGG
TACAGGAGAAGGATCGAGAAACCAGGTCAGTTTGCATAATAATTATATAC
CCTTAATTCGTACCCACCCAGGCACGGTGGAAGCGGGGAGACTTGGGAGA
CTTCAGCCTCCCAACTTTTGAGCAAATGAGATTATTTTCTCAAATTCCTA
GGGAATTTTATCTCATTTTGAGCCTTCAGCCTCCCCACTTTTACGGTTGT
TTCGCCGGGCCTGTGAAATGCAATTAATTTTCTTGAAAATGAGGTTAATG
ACTCTCTTCATGAAATTCAGGACGTAATGTTTTATACAGAAGCACCTGAA
ATAGCCCTGGTGTTTGCCACTAATTTTATTGTTTAATTTCAAAATGAGTG
GTAAATACCCGGCCTTTTTTGGTGCTTCCGTATAAAACATTACGTCATGA
ATATCACGAATTAAGGAATCCTTTAATTGCAGCCTGGTCAATTTTTTGAA
TTTTGCTTGAACTCGTTATTCTCTACTTTCAGATTAGCCTCCGCTCTATA
TCTAAGGTGTAAAATATTTTCTTATGTTTATATTTCTGCTATTTACAGCT
TGTTCTACTGAACCTTGTGTCGGAAAATTTTTAACGCTCCAGGGGGTTGC
CGGAGACGTGCTGCTGGAGTTTGAAATTTGGACAATATCAGATAATGAAT
TAATATTTGATGAATTTGGGACCCTGTCACATCCCAAAATCGAACCCTAA
AAATTGTCCAAATATTCAAGAGTCTCTGTCAGATACACATCTTTAAAACT
AGTGAATTCGGGACCCTGTCAGATATCATTAGAGCCTTAAAATGTGGATC
CAGACCAACGGCACGCCCTGTACCCAATCTTGCCTAAGTGACTTCCCTAG
ATTTATCGCTTTGAATTTAACTGTGTGTTTTCACAATATTTCTTCCACCA
CAGGGAACAAATTATTGCCATCCATGGGCATGTGTGACGTTGAAGAATCG
GCCACAAATCTTGGTGCAACAGCCCACAACAGCCATTCCTTTGTTTGTGA
AATGTCTACACATGTTCTGTATCAATATGTTCTTTTGGTCATGTGGTTCC
TCTTTGTTGTGTCAATCTCAATATCCATCATTGGATGTTTATCCCAGGTT
CTTGGTTATTTCTTGCATTTCATGTTTGGTCAATTTGGAAGCACACCCAA
GAAAACCATTTTAAGGGTGATCACACTGAGGGAGGCTGAGTATTTGAAAT
TCATCAAATCGAAGAATATGGTGATGTATGGTGAAGTGTTGAGAAAATTA
AAACAACATCGATCAGATTTGCAAGGGAAAATTGCTCATGAAGATTTCGA
AACAAGTAATGGTTTTGTATGA Coding sequence (CDS) from alignment at sc0000260_pilon:416106..418177- >XLOC_028170 ID=XLOC_028170|Name=XLOC_028170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000260_pilon:416106..418177- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATGGTAGTAGTACGCTCTCTAAAAGACATCATCTCTATAAAGATTAA
ACCAAGACATGATTCACCTTGCGATCAATTCAGTCGTATATTTATGACCA
AAATGCTACTCATAGCATCTGTCGTAATGGGGTTCCAATATTTCTCGGAC
AAAATCAATTGCCTTCAAGCTCACAAATCTGACGTTTCTAAAGACTTTGT
TCATGCTGCTTGTTGGATATCCGGGCTCTATGTTTACAAAGAAAGAAAGC
TGGTTGAAAATCAAATATATCCTGGAATTCCGTCAAATTTAAAGATGGAC
GGTTTCACATCTGAGAGTTACCATCCTTGTGATTCAACATCGGCATCAAA
TATGGGAGTTGGTATGTGCACCAAATTGACCAGAGAATATTATCTCCATT
ATCAATGGATGCCGTTCTACATTGGTGCTTTAGCTATTTTTTATTATCTC
CCATATGTCTTGTTCAGGATCATCAATGTTGATCTTATCTCCTTAAAGTC
AGTTTTGGAATCGGTTACCGGTGATGCAGACCATATCGTCCGAAATTACT
TCAACTACAAAATCAATTCCATTGGTAAATTGCGCATGCGTATCTTTTTG
AATGTCATTGTGAAATGTGCATACGTTATTGCTAACCTTTTCGGTTTCTT
TTTCACTGATTATCTCCTTAATGGTAATTATCGGAATTACGGATTCGACT
ATATGGATTGGGCACGCGATAGCACAGATGAAAACCATATTGGGTTGAGG
TACAGGAGAAGGATCGAGAAACCAGAAAATGGTAGTAGTACGCTCTCTAA
AAGACATCATCTCTATAAAGATTAAACCAAGACATGATTCACCTTGCGAT
CAATTCAGTCGTATATTTATGACCAAAATGCTACTCATAGCATCTGTCGT
AATGGGGTTCCAATATTTCTCGGACAAAATCAATTGCCTTCAAGCTCACA
AATCTGACGTTTCTAAAGACTTTGTTCATGCTGCTTGTTGGATATCCGGG
CTCTATGTTTACAAAGAAAGAAAGCTGGTTGAAAATCAAATATATCCTGG
AATTCCGTCAAATTTAAAGATGGACGGTTTCACATCTGAGAGTTACCATC
CTTGTGATTCAACATCGGCATCAAATATGGGAGTTGGTATGTGCACCAAA
TTGACCAGAGAATATTATCTCCATTATCAATGGATGCCGTTCTACATTGG
TGCTTTAGCTATTTTTTATTATCTCCCATATGTCTTGTTCAGGATCATCA
ATGTTGATCTTATCTCCTTAAAGTCAGTTTTGGAATCGGTTACCGGTGAT
GCAGACCATATCGTCCGAAATTACTTCAACTACAAAATCAATTCCATTGG
TAAATTGCGCATGCGTATCTTTTTGAATGTCATTGTGAAATGTGCATACG
TTATTGCTAACCTTTTCGGTTTCTTTTTCACTGATTATCTCCTTAATGGT
AATTATCGGAATTACGGATTCGACTATATGGATTGGGCACGCGATAGCAC
AGATGAAAACCATATTGGGTTGAGGTACAGGAGAAGGATCGAGAAACCAG
GGAACAAATTATTGCCATCCATGGGCATGTGTGACGTTGAAGAATCGGCC
ACAAATCTTGGTGCAACAGCCCACAACAGCCATTCCTTTGTTTGTGAAAT
GTCTACACATGTTCTGTATCAATATGTTCTTTTGGTCATGTGGTTCCTCT
TTGTTGTGTCAATCTCAATATCCATCATTGGATGTTTATCCCAGGTTCTT
GGTTATTTCTTGCATTTCATGTTTGGTCAATTTGGAAGCACACCCAAGAA
AACCATTTTAAGGGTGATCACACTGAGGGAGGCTGAGTATTTGAAATTCA
TCAAATCGAAGAATATGGTGATGTATGGTGAAGTGTTGAGAAAATTAAAA
CAACATCGATCAGATTTGCAAGGGAAAATTGCTCATGAAGATTTCGAAAC
AAGTAATGGTTTTGTATGAGGAACAAATTATTGCCATCCATGGGCATGTG
TGACGTTGAAGAATCGGCCACAAATCTTGGTGCAACAGCCCACAACAGCC
ATTCCTTTGTTTGTGAAATGTCTACACATGTTCTGTATCAATATGTTCTT
TTGGTCATGTGGTTCCTCTTTGTTGTGTCAATCTCAATATCCATCATTGG
ATGTTTATCCCAGGTTCTTGGTTATTTCTTGCATTTCATGTTTGGTCAAT
TTGGAAGCACACCCAAGAAAACCATTTTAAGGGTGATCACACTGAGGGAG
GCTGAGTATTTGAAATTCATCAAATCGAAGAATATGGTGATGTATGGTGA
AGTGTTGAGAAAATTAAAACAACATCGATCAGATTTGCAAGGGAAAATTG
CTCATGAAGATTTCGAAACAAGTAATGGTTTTGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260_pilon | genome | sc0000260_pilon:416106..418177 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 778-1194:418 |
| Aaloc | 1-774:2073 |
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