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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000265_pilon:94892..97894- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_028114 ID=XLOC_028114|Name=XLOC_028114|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3003bp|location=Sequence derived from alignment at sc0000265_pilon:94892..97894- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAACGGTTGAAAATAATCTTTTACAAACTCTTAACATCGAAAG
ATTGGTCGAATTTGACAGTCACATTGGGGATGTTTTTCAAAATGTTTTTT
ATACACTCTCGAATAACACGGCAATGAAGATAGAAAAAATGGGCATTGTG
TCTCATTTCTTAAGGAGTTGGAAAGACACGGTCGGTGCCTCTAGTATCTC
AAAAACATTACCATCTATCATAACAGGTAACAAATCTTAATCTAAAACTT
GTTCACAATGTCCTGCGGAGGAGGTCCTTGAGCGAAAAAAGTTTTGAAAG
ACTCTCACTATCCCTTAGCACAAGTAAAATAGAATAATTTTTTTCATTCC
ATTCAACTTTGAAGCCACAGAAAGCATATTTCATCCAATTGATTTCATAG
ATATTCAAACCCCACCCATCTTGATATCGTCACCTACTGGCCAAAGAGAC
AGAGTACGTGATGTTAAGTCTATTCGAGACAGGGGTGTAATCTGAGCTGT
TCTGCATCAACTTCCTTCCCTCATGTGCTAGCACGCTAGAGGACTATACT
TAAAACATTATATAATGGTCTTAAGGAAACCCGGAAAGGGTATACTTTTT
TATAAGAGCAAACTATATAAGAATATAAGGCTTCGCTGGCCAAAATCTAA
AGAACAAGTTAAGAACACTTTAAGGTTTCGTGAGCTTTAAAACATCCAAT
TTCTTGGGAAATTGCACAAGAATGCTCATTAAATGAATGATGAAATTAAG
AATTTTTCTAGACATAAAAAATTATTTGAATTTTCATGTATAAAAAAATG
TGTGAGTACAACAGAGTTACAATTTTAATGTCATCCCATAACAATTATAT
ACCTATAACACCTATATTATTATATGATACGTATTATAAATGACTTCGTT
CTATTTCATCCATATAGGAAGCATCGTTGAAGGAGCTTGTCTTTCTCGTT
TATACCATCCCTCACATGAGCAGTCCCTGGAACTTGAAGCCGACATTATG
TATATTGTAGGGGTCATCGATGAACAAACCGCAAATCAATGTTTTCAGGT
ACATAAGATTAAAATGGGTAATGATCATGACGTTTTAACACCCCTGTGTC
ACAGACCCACGCCCCACTGAAAAATTGGCGAAAATACCCTAGAATTTTAG
CCCCGTTGAAAAATTGAATTTAATTTCATCCCCATTCGAAATTCAATGTT
TAAAAATCGCACTTCAAAACCATCCCTTTGGATTTTTCAACCTTGGAACT
GTAAATTTTCTATCCCCATTGGAATTTCAATAGGAATTATCCCCACTGAG
GAAAAAATTTCCACCGGGGCTGTGGAGATAGGGGTGTGTTTTAAAATCAT
TAACTGGTTCTTATAGAAAAGGATTGATTCCAATATTTTTGAGGAAGTGA
ATAGTACTGTGACCCAAATACAATTTGTTTATTTTCCCAGGATGAACCCA
AAACTGGATTCTTGAAAGTGAAATACTCTCCAAGTATTACAATGTTTACA
TCTGAGAATCAAATGAAAATTGAAAATGCTGTGGAAATTACACCGGATGG
TTGTAAATATCTCAACGGGAAAGAGTTAAAAATTATGCATAAAAATCTAC
AAGTTAATGAACAGCGGTTACGTATTGATAATGGTTCGCCATGCATTATT
ACAGTCAATCAGAAAATTAGTGGACCTAGTTCAGAAATCGTCTTCAAAAT
TGTCCCAATACACCATCAGCATCAAATTGAAAACATCGCGTCTTTTCTCA
AAGACATAACACAGCTTTTTGAAGGAAAATGCGAATCTTTCTACCAAGAA
TTTACTCATGCTCAAGAACTTTGTACAATTCTAGAAAACGTTTTGAAAGC
AGTCAAAGAAATTGAGTCAGATCGTATTTTTGATAAGGAGCATGATGATA
AAAACCTTCCCCTTCTTTCGTGTGAGGCGGAAGACATCATATCACAAGTG
ATAGAAAAGTTTAACAGTCTAGACACGAGTAAATTAGAAACCGATTTCAA
AGAGATGCACTCACTTTTGGAGGGAATAATTTTGTTATGTTCTGGTAACG
AGGACAGTCATGCGAAAGCAAGACTTGATGTTTTCAATATCAAATCTTTG
GACCTGACGGCTATGGCCAAAGAAACGCTACAAACTAACCCAATGGTTCA
AGAAGTCAAAGGTCAAGGCAAAACCCTGAACGAAGCTGTAAAAGTGTTAG
AGATGATTGATATCTCCCTTGTGAAAGCTCATTCGAACTTACCAAATATT
TTACAAGAATACAGAGAAAACATCGTCAAAGATGTCGCAAATTTAGTGAA
ATCTATCGAAGACCGATCCAAAGAAGAATGTTATCACCAAAACATCGATT
CCATATCTTTTGATAACGTATCCTGCTTCTACTGTCCTTTCTGGCCCAAA
ATAGCCGAGGAATGGGTCCACAGAAAACGCCAATGGCCTTCTACGGAACA
GATCCAACAAATATCCGATGCTGGAACTTTCATCGTAGCAAAACAAAGCG
AGGAAGGTCAACACCACGCCTTAGAATGGAGATGGTCTTTCTCAACCGCA
GAAATATCACTGGCAAAGCTTCGAACTTCAACTATGAAGTATTGCTATTT
CATTTTCAAAACAATGTTTTATAAATATTTTAAAAATTTCCCTGGTGTTG
TAAAATCGTTACCGTCATATTTTGCGAAGACCTGCATGCTGTACGTTTCT
GAGCAGCAAAAAGAATATTGGTGGGATGAAAATGGTGTTGTAGGCTCATT
ACTGCATCTTTTCAAGTTTTTGAAGAAGAGTCTAGAGGAAAAGATGCTTC
CCCATTACTTCATCCATCACCTTAACCTTCTCCAGGATATAGACATATCG
TTGATAAATCAAGCTCTAAACATGGTCAACCAGATCCTACAAGATCCATC
TAATTATCTAACACTAGAGGAAAGCCGCATGGAAATTTTTAACCGAATTG
AGAATGAAGTCAACTCACTTCTATCAACTGGAGTGGAAAGTGAAGAGAGG
AAA Coding sequence (CDS) from alignment at sc0000265_pilon:94892..97894- >XLOC_028114 ID=XLOC_028114|Name=XLOC_028114|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3840bp|location=Sequence derived from alignment at sc0000265_pilon:94892..97894- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAACGGTTGAAAATAATCTTTTACAAACTCTTAACATCGAAAG
ATTGGTCGAATTTGACAGTCACATTGGGGATGTTTTTCAAAATGTTTTTT
ATACACTCTCGAATAACACGGCAATGAAGATAGAAAAAATGGGCATTGTG
TCTCATTTCTTAAGGAGTTGGAAAGACACGGTCGGTGCCTCTAGTATCTC
AAAAACATTACCATCTATCATAACAGATGGAGAAAACGGTTGAAAATAAT
CTTTTACAAACTCTTAACATCGAAAGATTGGTCGAATTTGACAGTCACAT
TGGGGATGTTTTTCAAAATGTTTTTTATACACTCTCGAATAACACGGCAA
TGAAGATAGAAAAAATGGGCATTGTGTCTCATTTCTTAAGGAGTTGGAAA
GACACGGTCGGTGCCTCTAGTATCTCAAAAACATTACCATCTATCATAAC
AGGAAGCATCGTTGAAGGAGCTTGTCTTTCTCGTTTATACCATCCCTCAC
ATGAGCAGTCCCTGGAACTTGAAGCCGACATTATGTATATTGTAGGGGTC
ATCGATGAACAAACCGCAAATCAATGTTTTCAGGAAGCATCGTTGAAGGA
GCTTGTCTTTCTCGTTTATACCATCCCTCACATGAGCAGTCCCTGGAACT
TGAAGCCGACATTATGTATATTGTAGGGGTCATCGATGAACAAACCGCAA
ATCAATGTTTTCAGGATGAACCCAAAACTGGATTCTTGAAAGTGAAATAC
TCTCCAAGTATTACAATGTTTACATCTGAGAATCAAATGAAAATTGAAAA
TGCTGTGGAAATTACACCGGATGGTTGTAAATATCTCAACGGGAAAGAGT
TAAAAATTATGCATAAAAATCTACAAGTTAATGAACAGCGGTTACGTATT
GATAATGGTTCGCCATGCATTATTACAGTCAATCAGAAAATTAGTGGACC
TAGTTCAGAAATCGTCTTCAAAATTGTCCCAATACACCATCAGCATCAAA
TTGAAAACATCGCGTCTTTTCTCAAAGACATAACACAGCTTTTTGAAGGA
AAATGCGAATCTTTCTACCAAGAATTTACTCATGCTCAAGAACTTTGTAC
AATTCTAGAAAACGTTTTGAAAGCAGTCAAAGAAATTGAGTCAGATCGTA
TTTTTGATAAGGAGCATGATGATAAAAACCTTCCCCTTCTTTCGTGTGAG
GCGGAAGACATCATATCACAAGTGATAGAAAAGTTTAACAGTCTAGACAC
GAGTAAATTAGAAACCGATTTCAAAGAGATGCACTCACTTTTGGAGGGAA
TAATTTTGTTATGTTCTGGTAACGAGGACAGTCATGCGAAAGCAAGACTT
GATGTTTTCAATATCAAATCTTTGGACCTGACGGCTATGGCCAAAGAAAC
GCTACAAACTAACCCAATGGTTCAAGAAGTCAAAGGTCAAGGCAAAACCC
TGAACGAAGCTGTAAAAGTGTTAGAGATGATTGATATCTCCCTTGTGAAA
GCTCATTCGAACTTACCAAATATTTTACAAGAATACAGAGAAAACATCGT
CAAAGATGTCGCAAATTTAGTGAAATCTATCGAAGACCGATCCAAAGAAG
AATGTTATCACCAAAACATCGATTCCATATCTTTTGATAACGTATCCTGC
TTCTACTGTCCTTTCTGGCCCAAAATAGCCGAGGAATGGGTCCACAGAAA
ACGCCAATGGCCTTCTACGGAACAGATCCAACAAATATCCGATGCTGGAA
CTTTCATCGTAGCAAAACAAAGCGAGGAAGGTCAACACCACGCCTTAGAA
TGGAGATGGTCTTTCTCAACCGCAGAAATATCACTGGCAAAGCTTCGAAC
TTCAACTATGAAGTATTGCTATTTCATTTTCAAAACAATGTTTTATAAAT
ATTTTAAAAATTTCCCTGGTGTTGTAAAATCGTTACCGTCATATTTTGCG
AAGACCTGCATGCTGTACGTTTCTGAGCAGCAAAAAGAATATTGGTGGGA
TGAAAATGGTGTTGTAGGCTCATTACTGCATCTTTTCAAGTTTTTGAAGA
AGAGTCTAGAGGAAAAGATGCTTCCCCATTACTTCATCCATCACCTTAAC
CTTCTCCAGGATATAGACATATCGTTGATAAATCAAGCTCTAAACATGGT
CAACCAGATCCTACAAGATCCATCTAATTATCTAACACTAGAGGAAAGCC
GCATGGAAATTTTTAACCGAATTGAGAATGAAGTCAACTCACTTCTATCA
ACTGGAGTGGAAAGTGAAGAGAGGAAAGATGAACCCAAAACTGGATTCTT
GAAAGTGAAATACTCTCCAAGTATTACAATGTTTACATCTGAGAATCAAA
TGAAAATTGAAAATGCTGTGGAAATTACACCGGATGGTTGTAAATATCTC
AACGGGAAAGAGTTAAAAATTATGCATAAAAATCTACAAGTTAATGAACA
GCGGTTACGTATTGATAATGGTTCGCCATGCATTATTACAGTCAATCAGA
AAATTAGTGGACCTAGTTCAGAAATCGTCTTCAAAATTGTCCCAATACAC
CATCAGCATCAAATTGAAAACATCGCGTCTTTTCTCAAAGACATAACACA
GCTTTTTGAAGGAAAATGCGAATCTTTCTACCAAGAATTTACTCATGCTC
AAGAACTTTGTACAATTCTAGAAAACGTTTTGAAAGCAGTCAAAGAAATT
GAGTCAGATCGTATTTTTGATAAGGAGCATGATGATAAAAACCTTCCCCT
TCTTTCGTGTGAGGCGGAAGACATCATATCACAAGTGATAGAAAAGTTTA
ACAGTCTAGACACGAGTAAATTAGAAACCGATTTCAAAGAGATGCACTCA
CTTTTGGAGGGAATAATTTTGTTATGTTCTGGTAACGAGGACAGTCATGC
GAAAGCAAGACTTGATGTTTTCAATATCAAATCTTTGGACCTGACGGCTA
TGGCCAAAGAAACGCTACAAACTAACCCAATGGTTCAAGAAGTCAAAGGT
CAAGGCAAAACCCTGAACGAAGCTGTAAAAGTGTTAGAGATGATTGATAT
CTCCCTTGTGAAAGCTCATTCGAACTTACCAAATATTTTACAAGAATACA
GAGAAAACATCGTCAAAGATGTCGCAAATTTAGTGAAATCTATCGAAGAC
CGATCCAAAGAAGAATGTTATCACCAAAACATCGATTCCATATCTTTTGA
TAACGTATCCTGCTTCTACTGTCCTTTCTGGCCCAAAATAGCCGAGGAAT
GGGTCCACAGAAAACGCCAATGGCCTTCTACGGAACAGATCCAACAAATA
TCCGATGCTGGAACTTTCATCGTAGCAAAACAAAGCGAGGAAGGTCAACA
CCACGCCTTAGAATGGAGATGGTCTTTCTCAACCGCAGAAATATCACTGG
CAAAGCTTCGAACTTCAACTATGAAGTATTGCTATTTCATTTTCAAAACA
ATGTTTTATAAATATTTTAAAAATTTCCCTGGTGTTGTAAAATCGTTACC
GTCATATTTTGCGAAGACCTGCATGCTGTACGTTTCTGAGCAGCAAAAAG
AATATTGGTGGGATGAAAATGGTGTTGTAGGCTCATTACTGCATCTTTTC
AAGTTTTTGAAGAAGAGTCTAGAGGAAAAGATGCTTCCCCATTACTTCAT
CCATCACCTTAACCTTCTCCAGGATATAGACATATCGTTGATAAATCAAG
CTCTAAACATGGTCAACCAGATCCTACAAGATCCATCTAATTATCTAACA
CTAGAGGAAAGCCGCATGGAAATTTTTAACCGAATTGAGAATGAAGTCAA
CTCACTTCTATCAACTGGAGTGGAAAGTGAAGAGAGGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000265_pilon | genome | sc0000265_pilon:94892..97894 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 358-1920:1564 |
| Aaloc | 229-357:2085 |
| Aaloc | 1-225:3004 |
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