XLOC_027978 (mRNA) -

Overview
NameXLOC_027978
Unique NameXLOC_027978
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000268_pilon:467705..468909+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027978 ID=XLOC_027978|Name=XLOC_027978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1205bp|location=Sequence derived from alignment at sc0000268_pilon:467705..468909+ (Clytia hemisphaerica_ch_hm2_pilon)
AACACAGATTGTCCATACGTCGAAATAACGTGTCATTTTATGGGATGTGA CGTTCGCTTCTTACGTAAAGCGAAACAACAACACGAACAAAATTGTCCGA TGAAAGAGGTGAACTGCGTGTACTGTCAAATGGCTTTTAAAGAAAGAGAT GAACAGGTAAAATTGCTTTGCTCTAAATATTACAATACAAAGCAACAATG GCAGTAATCTTGGATAAATTCCGAACTAATCATGCAAGCACAACTAGCAA ACGTAGAAAAGATCCGATGAAACCAATTTCAGTTTCAATCATAAGTCCca gaaaaattctagaaaaccTGATACAGTAAGAAACGATATAATCTGCATAA GTGATCCTGAGAATGTCAATATGATTGAAAGCTACGCGAGTCTTTCTGTC CTCATAGGTTAACATGTCATACAAAGCTAAACTTTCATGTTTATGGTCAA TAGACGAGATGGATAATATAGATGTTTAAATCCCCCGTTAACGTGTTTAT CAGAATCATCAAAAGCGTGAGATCTGTAGAACTTTACTGGGAAAAACAAT AAATTCGGCACATAGGGGAGAAACTCACGTagtcctctgagctttacaca ctatcatttgtgttttgaaaagctggtaaaaacccATGCCATTTTTTGAT AGAACAATATATactattgtttgaaaaaaattctaaaatctggATAGAAA AGTACAAACTTTCGGGGAAGAGCTTTCACTCCAAATCATTATCGTTTTTG AATGGTAAATTAAATGTGTTTATAATCCGTGATGTCATAAATCTAATAAT GAAGAGATTTTCATCTTAAATTCTAGAATCATTATCGACAATGTTTGAAA TATCCAACGAAATGTCCAAATCAAGGATGCGAAAAAGTATTTCCAAAGAA TGCGGTATGTAAACCTAGGCTGTCAGCACCCTATACTTGTTTTGTTATAA ACGATGTGAATCGACCTCAAAAACCACGTCTGCTTagcttagtttttttt tttagttttgagtGGAAACCAAAGCTTGatgtaatttttttagaaaatag cTCGGAAAATAGGTcacaattttctaaattttctaccTTTGTAGCcaaat gtttttgttattttctttcaGGTTTCTGGTCATCAAAACACAGAATGTCT TTTTCAGACAATTAAatgtgaatttgaaaattttggttgcAATGTTCAGG TATTA

Coding sequence (CDS) from alignment at sc0000268_pilon:467705..468909+

>XLOC_027978 ID=XLOC_027978|Name=XLOC_027978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=636bp|location=Sequence derived from alignment at sc0000268_pilon:467705..468909+ (Clytia hemisphaerica_ch_hm2_pilon)
AACACAGATTGTCCATACGTCGAAATAACGTGTCATTTTATGGGATGTGA
CGTTCGCTTCTTACGTAAAGCGAAACAACAACACGAACAAAATTGTCCGA
TGAAAGAGGTGAACTGCGTGTACTGTCAAATGGCTTTTAAAGAAAGAGAT
GAACAGAACACAGATTGTCCATACGTCGAAATAACGTGTCATTTTATGGG
ATGTGACGTTCGCTTCTTACGTAAAGCGAAACAACAACACGAACAAAATT
GTCCGATGAAAGAGGTGAACTGCGTGTACTGTCAAATGGCTTTTAAAGAA
AGAGATGAACAGAATCATTATCGACAATGTTTGAAATATCCAACGAAATG
TCCAAATCAAGGATGCGAAAAAGTATTTCCAAAGAATGCGAATCATTATC
GACAATGTTTGAAATATCCAACGAAATGTCCAAATCAAGGATGCGAAAAA
GTATTTCCAAAGAATGCGGTTTCTGGTCATCAAAACACAGAATGTCTTTT
TCAGACAATTAAatgtgaatttgaaaattttggttgcAATGTTCAGGTAT
TAGTTTCTGGTCATCAAAACACAGAATGTCTTTTTCAGACAATTAAatgt
gaatttgaaaattttggttgcAATGTTCAGGTATTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027978XLOC_027978-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000268_pilongenomesc0000268_pilon:467705..468909 +
Properties
Property NameValue
Aaloc235-318:1122
Aaloc157-234:827
Aaloc1-156:1