XLOC_027681 (mRNA) -

Overview
NameXLOC_027681
Unique NameXLOC_027681
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000373_pilon:149845..151772-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027681 ID=XLOC_027681|Name=XLOC_027681|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1928bp|location=Sequence derived from alignment at sc0000373_pilon:149845..151772- (Clytia hemisphaerica_ch_hm2_pilon)
GCTAATCAAAATAAATGTAAAGCGATCAACTTCAACGCGAAACTTAAAAT TTGTGAGTTACTTGGAGATAATGCTCATTCAACACACAATAAACTCAGCT TGAAAACTGAGAAGGACTGGGTGTATTATGGACCTAAACAACAAAATGAG GTAATCAATTATCTTTCGACGCTGCAGTACTTTAAATTTAATATACGTAC TCTTAGGCTCCAAATAAACGGGGGGGGGGGGTTCAAATAAACGGGGGGGG GTTGGAAAATTTTCTAGATTTTAATAAACGGGGGGGGGACCTAATTGCCG GTGGGGTTGGAAATTGTACTTCTGAAACCAAAAAATAAGGTAAAAATAGG CTAAAATCAGGCTATTTAGAGCAAAATAAGGGGCCTTATCTTTGACAGCT GAAAATATTCTTAAAGATTAATAAACGGGGTGGTCCTAATAAGGTCCGGG GGGTTGGAAAATTTTCGAAAAATTAACAACCGGGGGGGCCCGTTTATTTG GAACCTAAGAGTATCAAATTTACGGTTCTGGTCTTTTTACATGGGCTTCT GCTCATCCTCTAGCGAAGAGAGTTTCTATACAGGAAGTACCTATATCTTT GCATGGGGATGTAAATTCCATTGTTTTCTAGCCAGAAAATTCAGTTGGGA TGGAAAAAATAGTACAATAGATCTTATCGGAGTTTTTGATTTTTCTAAAA AAACGATGCATTGTGGAATTGTTTCGGGGGTATTACAATAGAAATCTCTC AGGAATTCCTCGAGGCAATTCTATTGTAATACTCCCGAAACAATCCTACA ATACATCGTTGTTTTAGAAAAATCAAAAACTCCGATAGCGATAAGGCTTA TATTTCTATAGGTCTGAGAATTTCCTTATCTGTTTATTTTCAGTGGGGAC AAAAATTAGAGTATAATTTCCCACCGGGGGACGGTATTTTTGCCAATTTT TCCAGTGGGAAGGGTTTCTATAGTCGGTCTGTGAGAAAGGAGGTGTATTT CCATTTTCTTCCAAAGGTTTATACAGGATGTGATCAATTCAAAGATATTG ATGGACGAGAATACTGTTGTCCTACAGGAACCTATGGATCACGTTGTCAA TTTCAACGTAAGTTTTCACTTGAACATAGATTCATTCCGGGGGGGGGGGG GGGGTGGTCTAGGGTTGGCGGATGAGTAGTATGTCCGGACGGGACCTCTG AGAACAAGACCCTTAGAGAGACTGATTTTTGCCAAAGATGATCCTTAGAG AGTCTTTTTAGAAAAACTCTCTTCTATTTTAGAAAAGAATCCTACCCTTT TTTTCTCTCGAAACCAAAAGTTTTCTAAAAATTGTGAATTTTCCGACCCT TAGCCCGGATTCATTCAAAATGAGCCTAAATAGTCCAAGCATGAGTAACT ATGTAATAGTTATCACACGGTACCGAGTACAATATGGGATATTATTTTTC GAGTTCAGATTTTTCGTCATATTTTCAGAGCATTTAGGCAAGGAAAACAC AGAAAGCTCTGAACGAGAACATTTCATTATATATGTTGATGATAAGATCG TAAAAAGCCTTGTATTTTGATTAATATCTAGCTACTCTCTATCAAATCAT TTGACATTTTAAATTGCTAATATTTTTCTCAAATTTCAGCGTCTGATTTC CAGAATTGAAAAAATTCTGAAAGTTATTTTAAAATAGCGTCGATGAGTGT TGCAATGGTTTACCTATAAACACTTGTCATTTTTATTCTCACTTAGGAAC TACGACCACTACACCAACAACGACAACGACACCGACAACGACAACCACGG CACAAGCAAGAGGTTGTGTTGGAGTCGCTCCATTTGACACTGATGCTCAA GCTTCGTCATGCATGAGTACTTGTTTTCACATTCCTCCATACTGTCCATC CACTCATTGTCAATGCTGGGGAGAGTGA

Coding sequence (CDS) from alignment at sc0000373_pilon:149845..151772-

>XLOC_027681 ID=XLOC_027681|Name=XLOC_027681|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=846bp|location=Sequence derived from alignment at sc0000373_pilon:149845..151772- (Clytia hemisphaerica_ch_hm2_pilon)
GCTAATCAAAATAAATGTAAAGCGATCAACTTCAACGCGAAACTTAAAAT
TTGTGAGTTACTTGGAGATAATGCTCATTCAACACACAATAAACTCAGCT
TGAAAACTGAGAAGGACTGGGTGTATTATGGACCTAAACAACAAAATGAG
GCTAATCAAAATAAATGTAAAGCGATCAACTTCAACGCGAAACTTAAAAT
TTGTGAGTTACTTGGAGATAATGCTCATTCAACACACAATAAACTCAGCT
TGAAAACTGAGAAGGACTGGGTGTATTATGGACCTAAACAACAAAATGAG
GTTTATACAGGATGTGATCAATTCAAAGATATTGATGGACGAGAATACTG
TTGTCCTACAGGAACCTATGGATCACGTTGTCAATTTCAACGTTTATACA
GGATGTGATCAATTCAAAGATATTGATGGACGAGAATACTGTTGTCCTAC
AGGAACCTATGGATCACGTTGTCAATTTCAACGAACTACGACCACTACAC
CAACAACGACAACGACACCGACAACGACAACCACGGCACAAGCAAGAGGT
TGTGTTGGAGTCGCTCCATTTGACACTGATGCTCAAGCTTCGTCATGCAT
GAGTACTTGTTTTCACATTCCTCCATACTGTCCATCCACTCATTGTCAAT
GCTGGGGAGAGTGAGAACTACGACCACTACACCAACAACGACAACGACAC
CGACAACGACAACCACGGCACAAGCAAGAGGTTGTGTTGGAGTCGCTCCA
TTTGACACTGATGCTCAAGCTTCGTCATGCATGAGTACTTGTTTTCACAT
TCCTCCATACTGTCCATCCACTCATTGTCAATGCTGGGGAGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027681XLOC_027681-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000373_pilongenomesc0000373_pilon:149845..151772 -
Properties
Property NameValue
Aaloc295-429:136
Aaloc244-288:181
Aaloc151-240:913
Aaloc1-150:1929