XLOC_027669 (mRNA) -

Overview
NameXLOC_027669
Unique NameXLOC_027669
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000367_pilon:171478..172739+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027669 ID=XLOC_027669|Name=XLOC_027669|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1262bp|location=Sequence derived from alignment at sc0000367_pilon:171478..172739+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTGCGTGTGCAATGGAAAATGGTGATCACTCAGGAATTTGTTCGAA TGCAATGCAGCTGAAAGATTCAGTGCAAGAAGAAGAAAGAGATCTATTGT TCAATCCTAATAACTTCAAATGTCGGCAACAGGTATTGATTTTGTTTCCT TGAgtagaagttttttttataagaacatccaaagatttttaagccttagg atgttcttaacattttgagttttaagcctaaaaatgttcttaacatgttc ttattttcaccattttgaaagcatttttgtccattttcgtTAGAAATTGt atgcaaagccttaaaattttcttaacttgtccttaacattttggtcatcc aAGCCTAATGTTTttctatagtttgttctttataTGAAACTAACGTGTAG GAGTTTAGCGGGAGCTGAGACCCTTTTCTTTGTGAGTATTAAAAATTGTG GATTTCCGTCTCAGGGAAAAGTATGTAAAGATGttttttccatttcaaat tTCTGTATAATTCACAAAGTTTCAAGAGtatgtgctaatttgctgtgtaa aatcgaTTTTCCATTGTTGCTTTAACCACCACTTTTTGACTATGTTTGTA TGTTCTTCTCGCACACTTTTCAATATAAGAACATGCCTCGATGCTATTAT AAAAAGCCTAGGCTTTCAATCCCAAACATCACAACACTTCCAACAGATGC CTGGATAAAAGGAGAGAGGAGTTGgaaaagtttccaaattttaATTAAAG GGTGGGGTAATTGCCGTGGGTGAAATTGAGCTTAGTATTGATACCCaaaa aaaCTATAGACCGAAATCCGGCTTTTTAGAGCCAAATCAGAATCTCTgat ttgacagctgaaaatattttcaaaaatcaatattcaaaaaacaCCTTTTA CTACTTTGTATCTCCAGGTCTCTTTTCCAATATGGGCTCGTAAAGTTTGC AAGTCGAAACCCGAGCACCGAACACCGGAACAGCTTCACAATATAGTCAG TATCATGCGTCAACTCAAAGACTTCCGTAAATACTCAAAGAAGATGCAGT TATTGTTAGCTAAGATCGCTCGTTATGAAGGCTTTGGGAGAAGACGTGTT GTGATTAGGAAAGGACATTTtggtgtttgtttttatttcgttttctCGGG AAGTGTTGGCGTGGTAATCGATACTGACGAAGATAAAGCATTTGACAAAG ACGGGCGGAGTGAGTTTACATCCtttttttGTACTCTACTGATTTTTATT GAGGACGAATAA

Coding sequence (CDS) from alignment at sc0000367_pilon:171478..172739+

>XLOC_027669 ID=XLOC_027669|Name=XLOC_027669|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=954bp|location=Sequence derived from alignment at sc0000367_pilon:171478..172739+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTGCGTGTGCAATGGAAAATGGTGATCACTCAGGAATTTGTTCGAA
TGCAATGCAGCTGAAAGATTCAGTGCAAGAAGAAGAAAGAGATCTATTGT
TCAATCCTAATAACTTCAAATGTCGGCAACAGATGCGTGCGTGTGCAATG
GAAAATGGTGATCACTCAGGAATTTGTTCGAATGCAATGCAGCTGAAAGA
TTCAGTGCAAGAAGAAGAAAGAGATCTATTGTTCAATCCTAATAACTTCA
AATGTCGGCAACAGGTCTCTTTTCCAATATGGGCTCGTAAAGTTTGCAAG
TCGAAACCCGAGCACCGAACACCGGAACAGCTTCACAATATAGTCAGTAT
CATGCGTCAACTCAAAGACTTCCGTAAATACTCAAAGAAGATGCAGTTAT
TGTTAGCTAAGATCGCTCGTTATGAAGGCTTTGGGAGAAGACGTGTTGTG
ATTAGGAAAGGACATTTtggtgtttgtttttatttcgttttctCGGGAAG
TGTTGGCGTGGTAATCGATACTGACGAAGATAAAGCATTTGACAAAGACG
GGCGGAGTGAGTTTACATCCtttttttGTACTCTACTGATTTTTATTGAG
GACGAATAAGTCTCTTTTCCAATATGGGCTCGTAAAGTTTGCAAGTCGAA
ACCCGAGCACCGAACACCGGAACAGCTTCACAATATAGTCAGTATCATGC
GTCAACTCAAAGACTTCCGTAAATACTCAAAGAAGATGCAGTTATTGTTA
GCTAAGATCGCTCGTTATGAAGGCTTTGGGAGAAGACGTGTTGTGATTAG
GAAAGGACATTTtggtgtttgtttttatttcgttttctCGGGAAGTGTTG
GCGTGGTAATCGATACTGACGAAGATAAAGCATTTGACAAAGACGGGCGG
AGTGAGTTTACATCCtttttttGTACTCTACTGATTTTTATTGAGGACGA
ATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027669XLOC_027669-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000367_pilongenomesc0000367_pilon:171478..172739 +
Properties
Property NameValue
Aaloc133-477:918
Aaloc1-132:1