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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:525905..527516- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027554 ID=XLOC_027554|Name=XLOC_027554|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1612bp|location=Sequence derived from alignment at sc0000179_pilon:525905..527516- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAGAATGGAAACAATCACAGCGAAACAAGAAGAAATCCATCAGG
TATATAAATCAATTGTTTATTCATTTTCCTTTATAAACTAGAAAATAAGC
CCTAAGACTAAGAATATGAATTCGTTCTTCGTACATCATACTCCCGAGCT
TATTCGGTATTTGTAGCGGCCGTAGCATGAAGGTAAGCTACGGTGGGCAA
GGTTGTGGGTTCAATCCTCAACCGGTCATATCAAGACCTTAAAATGCTAC
TTGGTGCCTCTCTACTTGATACTCAGAAATTAAAAAAAAGGGTCAAGGGT
GAGAGGAGAAATCTAGGGAAAGGAGAGGCGACAACAAGAGACAAGGGAGC
CTACGGGTCACCCTCCACTGCAAAACTTACTTACTAGTAGCTAACAGCTG
CAATTCAGTATAAATTCTGTTTTTATAATGAACACGTTTGAAAGAACAAA
ATTCAGTGCTTCGGACTATTTCCCCAAAACCTTCTTCAACACAAAGGTAA
TAAATCTGGAGCCATTAGACCTGCAAACACTCTTAAGCAATGCCTTTTCT
TTAGGGAATGGTGCCACAAACAGAGAATATGTCTTATTTGCTGGTAACCC
GGGGAGTGGCAAAAGCACAATCTTGAACTGCTTGATGGCATCAAGAAGTC
CAGACCCTCTTCATGAAAGCCAGAGATTCAAGTCCGGTGTAGCTATTGCA
TCAGGGATGACGTACCAACTGGACAAGAAAGAAGTTTGTGGAGTTACTTA
CATGGATACTCCAGGTCTGGATGACGTCAATAAACGAAAACAAGCTGCTG
AAGCCATCACCAAGGCTTTGAGAGAGAATGGAAAATATCAAGTCATTTTT
GTGGTCACTTTGGAAGCTGGTCGAGTGAAACCGGCAGATGTGGCAACCAT
TCAATTGATCCTTGAAAGTGCAAAAGAGATAACTCATTATGGTGTCATTT
TCAACAAGCTGAGCAAGCCAGTAATGAAAAAGCTGACGGCCAAAGACGGC
AAGATGGCGCTGATCACTCAAGTATCTATTCAACCAGAAAAGGGAAAACC
GAAGCCGCTACCATTTCCTTTGTTTTTGAAGAAAGATGGTGAACTTGAAG
ATGAGGATGATGCAGTTGCTGAATTCCCTGAACTGGATACTTTCTTCGGT
GGGTTGCCTTACATTGACATCAAGAAAGAGAACGTCCATGACATCCCAAC
TGAAAGTTTTGAAGCTATGAAAAACAAGCTTGAAGATGCGCTTGACCACA
TGAAGAAAGATCGAGAGTCCATGAAACGACAAATGGACGAAGATCGAAAA
AACTTCAGACGAACACTTGAAGAAATGAATAGAAAAGAGCAAATGGAGAG
AGAGAGATTCGAAAAGGAGCGGGAAAGATCGGAGAAGAATCATGACAGTC
AAATGGATATGATGAAAACACAAATTAAAGAAACAAAAGAACAAGCAGCC
AAGAGTGAGGTAGCATCGCAGAAAAGCCATGAAGCTCAGATGAAGAAAGA
TCAACTTGATCATGCGTTGGCAATGAAACAATTGGACCAGGCACATCAAA
GAAGAATGAAACAAATCGATAACAACAAAAGAAGAGGATTCTTCAGCTTT
CTATTTGGCTGA Coding sequence (CDS) from alignment at sc0000179_pilon:525905..527516- >XLOC_027554 ID=XLOC_027554|Name=XLOC_027554|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2214bp|location=Sequence derived from alignment at sc0000179_pilon:525905..527516- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAGAATGGAAACAATCACAGCGAAACAAGAAGAAATCCATCAGA
TGGAGAAGAATGGAAACAATCACAGCGAAACAAGAAGAAATCCATCAGGG
AATGGTGCCACAAACAGAGAATATGTCTTATTTGCTGGTAACCCGGGGAG
TGGCAAAAGCACAATCTTGAACTGCTTGATGGCATCAAGAAGTCCAGACC
CTCTTCATGAAAGCCAGAGATTCAAGTCCGGTGTAGCTATTGCATCAGGG
ATGACGTACCAACTGGACAAGAAAGAAGTTTGTGGAGTTACTTACATGGA
TACTCCAGGTCTGGATGACGTCAATAAACGAAAACAAGCTGCTGAAGCCA
TCACCAAGGCTTTGAGAGAGAATGGAAAATATCAAGTCATTTTTGTGGTC
ACTTTGGAAGCTGGTCGAGTGAAACCGGCAGATGTGGCAACCATTCAATT
GATCCTTGAAAGTGCAAAAGAGATAACTCATTATGGTGTCATTTTCAACA
AGCTGAGCAAGCCAGTAATGAAAAAGCTGACGGCCAAAGACGGCAAGATG
GCGCTGATCACTCAAGTATCTATTCAACCAGAAAAGGGAAAACCGAAGCC
GCTACCATTTCCTTTGTTTTTGAAGAAAGATGGTGAACTTGAAGATGAGG
ATGATGCAGTTGCTGAATTCCCTGAACTGGATACTTTCTTCGGTGGGTTG
CCTTACATTGACATCAAGAAAGAGAACGTCCATGACATCCCAACTGAAAG
TTTTGAAGCTATGAAAAACAAGCTTGAAGATGCGCTTGACCACATGAAGA
AAGATCGAGAGTCCATGAAACGACAAATGGACGAAGATCGAAAAAACTTC
AGACGAACACTTGAAGAAATGAATAGAAAAGAGCAAATGGAGAGAGAGAG
ATTCGAAAAGGAGCGGGAAAGATCGGAGAAGAATCATGACAGTCAAATGG
ATATGATGAAAACACAAATTAAAGAAACAAAAGAACAAGCAGCCAAGAGT
GAGGTAGCATCGCAGAAAAGCCATGAAGCTCAGATGAAGAAAGATCAACT
TGATCATGCGTTGGCAATGAAACAATTGGACCAGGCACATCAAAGAAGAA
TGAAACAAATCGATAACAACAAAAGAAGAGGATTCTTCAGCTTTCTATTT
GGCTGAGGAATGGTGCCACAAACAGAGAATATGTCTTATTTGCTGGTAAC
CCGGGGAGTGGCAAAAGCACAATCTTGAACTGCTTGATGGCATCAAGAAG
TCCAGACCCTCTTCATGAAAGCCAGAGATTCAAGTCCGGTGTAGCTATTG
CATCAGGGATGACGTACCAACTGGACAAGAAAGAAGTTTGTGGAGTTACT
TACATGGATACTCCAGGTCTGGATGACGTCAATAAACGAAAACAAGCTGC
TGAAGCCATCACCAAGGCTTTGAGAGAGAATGGAAAATATCAAGTCATTT
TTGTGGTCACTTTGGAAGCTGGTCGAGTGAAACCGGCAGATGTGGCAACC
ATTCAATTGATCCTTGAAAGTGCAAAAGAGATAACTCATTATGGTGTCAT
TTTCAACAAGCTGAGCAAGCCAGTAATGAAAAAGCTGACGGCCAAAGACG
GCAAGATGGCGCTGATCACTCAAGTATCTATTCAACCAGAAAAGGGAAAA
CCGAAGCCGCTACCATTTCCTTTGTTTTTGAAGAAAGATGGTGAACTTGA
AGATGAGGATGATGCAGTTGCTGAATTCCCTGAACTGGATACTTTCTTCG
GTGGGTTGCCTTACATTGACATCAAGAAAGAGAACGTCCATGACATCCCA
ACTGAAAGTTTTGAAGCTATGAAAAACAAGCTTGAAGATGCGCTTGACCA
CATGAAGAAAGATCGAGAGTCCATGAAACGACAAATGGACGAAGATCGAA
AAAACTTCAGACGAACACTTGAAGAAATGAATAGAAAAGAGCAAATGGAG
AGAGAGAGATTCGAAAAGGAGCGGGAAAGATCGGAGAAGAATCATGACAG
TCAAATGGATATGATGAAAACACAAATTAAAGAAACAAAAGAACAAGCAG
CCAAGAGTGAGGTAGCATCGCAGAAAAGCCATGAAGCTCAGATGAAGAAA
GATCAACTTGATCATGCGTTGGCAATGAAACAATTGGACCAGGCACATCA
AAGAAGAATGAAACAAATCGATAACAACAAAAGAAGAGGATTCTTCAGCT
TTCTATTTGGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:525905..527516 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 52-1107:1057 |
| Aaloc | 1-48:1613 |
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