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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000347_pilon:202415..206213+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027512 ID=XLOC_027512|Name=XLOC_027512|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3799bp|location=Sequence derived from alignment at sc0000347_pilon:202415..206213+ (Clytia hemisphaerica_ch_hm2_pilon)
GAacttacaaaaaatcaaatccCTCGGACTGACAAATACTTCATTGATTA
TTTAGGGGATCCATTATGTAACTCTATTCGTTTCAGGCAGATTACACCCA
CTGCTGTACTTAAACTTATCAATGATCTTGATGCTCAGAAGGCATCAGGG
CCTTCAAGTATTCCTACATCCTTCCTAAAAATGATATCTCCAACTGCAAG
CACCATATTATCTCACATCTTTAACGTCAACATTAAAGAAGGCATCTACC
CTGATTGTCTaaaaaaaGCTAACATAAAACCTTTACACAAGAAAGACTCA
AAACTAGATATTGGCAGTTACAGACCCATTTCTCTGCTATccaacataaa
taaaatcttcgaaaaacttCTTCATTTCAGACTAGTCAAATTCTTCGAAA
ACAACAACATCTTTAGTGAAAAGCAATTCGGCACTAACCATGCTGTGATT
GCCCTTACTGAAGTTGTGAGATCAGCATTAGATAATGGTAATTTTGCAGC
TGGAGTTTTCATTGATCTTAAGAAGGCTTTTGATACAGTAGAGCATACCA
TCCTGCTACATAAACTGGTTCATTATGGCATCAGAGGACCAGCTCTTGCT
TTACTCAGGTCTTATCTCTCTAATCGTACTCACTGTGTCGATATAAGAAA
CACACATTCTGATCATGTCATCATCAAACATGGTGTCCCTCAAGGATCTG
TTTCGGGCCCCCTGTTATTCatcatttatattaatgatctccATCGCTCC
CTAGAAAACTCAGTAACTATTCATTTCGCTGACGACACTAGTCTTATTTG
CTGTGATAAATCTATAAAACATCTGAACAGAAAGGTTAACAGGGATCTTG
CTCTATTGGTCCATTAGCTGAGAGCAAACAAAATATGCCTTAACGCctca
aaaactgaaataatCCTACTTAGAAGTCCCAGGAACACTTTTACTAAACA
TCTTAATTTCAGACTCAGTGGACAAAAACTTCATCTATAAAGCAAAGCTA
AATATCTTGGAATCCTGCTAGACGAGCATCTTTCTTGGGAACCTCAAATT
CACAGTGTCTCGAACAAACTTTCTAGAACTGTTGGCTTCCTGTTAAAACT
CAGACATTTTGTGGACTTCAAAACACTTCTTTCTGTCTACTATGCTTTAT
TTGACTCACATTTAAActattgtcttcaaactttagGTCATACCACTCAA
GCCTCTTTcgaaatcaacataaaagggcttgcggaacgaacgttctgttt
tcgcaaagcgaagaaatccaAAATGTACTACTCCATCATTAATGCAGAAT
AACAAAAAAGCAACTTATAAGATCTTTTTCTGCTGAAGTAATTactgtac
acatttttttataagcaagtgtctgcccctatgGCGCTATGTCAGGCTCG
CATTTCGCTTAGCATTATATTGTTCTTAAAACAAAAGAGCCAACAAATGA
TaaaggtaccaaaaactgagtcTGCACATGCTAATAAatgttatgcttat
agaaaaaaaacatgtagttattcaaaagaccgttGCCTGGTTGCGTTTTC
CCAAACGACTATGCCAAGGAGgagaatgttggaaaaattagaaatgcaTG
AAGACAGGGGTGTTCCAAAAGCACCTGAAGGtatttgaaaagtcatttgt
actcaattttgtaattttttttaacagctttaaaaaatcttgctgactaa
aattacaaaaatatttgctCAATATATACAACTTTCCACagcataaaata
acaaaaattaatatcaaaaaatagcaCCGTGGCTGATTGTACTgttacag
agagtattttatacaaggcttttgaactaaaaataatttgatgtgtctta
aaaaaaatcttctagaatttttcaacaTAAGTATCTGTGAAAATAGACCC
TCTCttaaattaataataaaaagCTCCAGCATAAAAAGAACGATGAAGAG
CGGTGGAATTTGGCAtagacacccttgagaataaactctattgactTCCA
ATTGTTTCCAATTTCAAAGATGAACCATCTCCCCCACAGGACAGGACccc
attttgtcattttggccgaaatgaggtttgacggttgccaatttttagag
ggagcacactgcgacggagagcagtaaaatttggcacagaaacccttgag
aataaactctattgacttccaatagtttccaattccaaaagtAATCACAG
GAACTTCAAAAaccaaatttgagaatatcaaacgaatatcaaacgtcaAA
CGTAGAGTATCATACCAACTTCAACTTAATATCCAATCATATTTTATCGA
ATCTGGATGGGAATAATAGTGTAATgtttgcttgatctcaaacCACAAAG
TCTTTCTCGTTTCATgaagaataattaaaaaactccTACAGTAAAAATAA
TGTGTCTGTTCTTCACGTTGTAAAGTCTAAAAGTTAAAATAGTTCGAAGT
CTAAATGTTGTTCTTCACATCGTTCCTCCTCAAcgaattttactgaccac
cacAATCACCAAAGCAAATATTTCAATGGCGTATGATCTTTTTCGTAAAA
CGTTACTCAAATAGTTGAACAGTCAGTGTATTGGCTGACAACGTGACaaa
aaatcattgtttggcAACAATATCCGCTGAAtgttaagtttaaccatgac
ataattccaataaaattatagtgtctaaaaagttaaaatatttcgaaatc
cgAATGTTGTTTTAAATCTGACTTGACTGATGCAGTtgatatttggtttg
atcaagTCACAAGAACAGTTTTCCATGAAACTAATTGATGTAATAGGAAT
AGTTACTCCAATCAATTATCACAAAAAAGTGCCATGAAGTTTGGATGCCA
CAATGTCTATGTAAACAACCATCAGaccatttatcgaaaatttcagtTGA
CAGCCACATCAGCAAGTAGAGGATAAGACAGCTCTCacctctcccagagg
aagtggtaaaaaacctcaagaatgatactcgagtaaaatttCTAATAGTG
TGAACAGTAGCAAcgtcattttacaagcaaaaaatgACTTTCAGCTTaaa
aaaaaTCGGCAGGATCATGTCGATAAaaaccgccatctttgtttatgttt
cacAAGCGTGTGAatcaaactcgatataatttcagatactttttactttt
ttgcaaaaaagtttaatgatagaaacaaaaataaagtttttctaaaagta
atttccagtaaaatttaaGAGATAGATGCTTCTTTTCACTGGTTAAATCG
TATCATTCCTAAGAGCAAAGTCGACATTTTTCACCGTTGTCAAGCACTTC
TCGATCGTCCATCGTTGTCAAGCACTTTTCGAGACACTTCTCCGAACATA
TACATTATTTTTTACGTCCCGCGTATGcggatcttgccaaaggatgctac
actccctattcgggcgcttcgcgccctcataacggtcgttccgcaaaaat
tgaagttcttcaaaataaagcctTGAGAGTTATACACTTTAAACATAGCA
GACACTCGGCTCGCCCACTCTTTATTACATCTTCTATTTTGCCAATCAAA
AAACAACTCAAAGTAAAGAACTGCCTTTTTGCTCTCGACCATATTCAAAA
TAATCTACCTAAATACTTTTCAAACTACCTTAGATACTCTCCTGTACACG
AAGGTACAAGACAGTCACCCAAGAAACTTGAACCGCCAACAACCAATACG
GTAAAGTATGGCTCTTACAGTGTAGCTTCCCTAATAACTAAGGACTGGAA
CGAACTCCATACTAAGGTTTTGATTCAAGACTTAAGCGAATGCTCTAAA Coding sequence (CDS) from alignment at sc0000347_pilon:202415..206213+ >XLOC_027512 ID=XLOC_027512|Name=XLOC_027512|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3132bp|location=Sequence derived from alignment at sc0000347_pilon:202415..206213+ (Clytia hemisphaerica_ch_hm2_pilon)
GAacttacaaaaaatcaaatccCTCGGACTGACAAATACTTCATTGATTA
TTTAGGGGATCCATTATGTAACTCTATTCGTTTCAGGCAGATTACACCCA
CTGCTGTACTTAAACTTATCAATGATCTTGATGCTCAGAAGGCATCAGGG
CCTTCAAGTATTCCTACATCCTTCCTAAAAATGATATCTCCAACTGCAAG
CACCATATTATCTCACATCTTTAACGTCAACATTAAAGAAGGCATCTACC
CTGATTGTCTaaaaaaaGCTAACATAAAACCTTTACACAAGAAAGACTCA
AAACTAGATATTGGCAGTTACAGACCCATTTCTCTGCTATccaacataaa
taaaatcttcgaaaaacttCTTCATTTCAGACTAGTCAAATTCTTCGAAA
ACAACAACATCTTTAGTGAAAAGCAATTCGGCACTAACCATGCTGTGATT
GCCCTTACTGAAGTTGTGAGATCAGCATTAGATAATGGTAATTTTGCAGC
TGGAGTTTTCATTGATCTTAAGAAGGCTTTTGATACAGTAGAGCATACCA
TCCTGCTACATAAACTGGTTCATTATGGCATCAGAGGACCAGCTCTTGCT
TTACTCAGGTCTTATCTCTCTAATCGTACTCACTGTGTCGATATAAGAAA
CACACATTCTGATCATGTCATCATCAAACATGGTGTCCCTCAAGGATCTG
TTTCGGGCCCCCTGTTATTCatcatttatattaatgatctccATCGCTCC
CTAGAAAACTCAGTAACTATTCATTTCGCTGACGACACTAGTCTTATTTG
CTGTGATAAATCTATAAAACATCTGAACAGAAAGGTTAACAGGGATCTTG
CTCTATTGGTCCATTAGCTGAGAGCAAACAAAATATGCCTTAACGCctca
aaaactgaaataatCCTACTTAGAAGTCCCAGGAACACTTTTACTAAACA
TCTTAATTTCAGACTCAGTGGACAAAAACTTCATCTATAAAGCAAAGCTA
AATATCTTGGAATCCTGCTAGACGAGCATCTTTCTTGGGAACCTCAAATT
CACAGTGTCTCGAACAAACTTTCTAGAACTGTTGGCTTCCTGTTAAAACT
CAGACATTTTGTGGACTTCAAAACACTTCTTTCTGTCTACTATGCTTTAT
TTGACTCACATTTAAActattgtcttcaaactttagGTCATACCACTCAA
GCCTCTTTcgaaaGAacttacaaaaaatcaaatccCTCGGACTGACAAAT
ACTTCATTGATTATTTAGGGGATCCATTATGTAACTCTATTCGTTTCAGG
CAGATTACACCCACTGCTGTACTTAAACTTATCAATGATCTTGATGCTCA
GAAGGCATCAGGGCCTTCAAGTATTCCTACATCCTTCCTAAAAATGATAT
CTCCAACTGCAAGCACCATATTATCTCACATCTTTAACGTCAACATTAAA
GAAGGCATCTACCCTGATTGTCTaaaaaaaGCTAACATAAAACCTTTACA
CAAGAAAGACTCAAAACTAGATATTGGCAGTTACAGACCCATTTCTCTGC
TATccaacataaataaaatcttcgaaaaacttCTTCATTTCAGACTAGTC
AAATTCTTCGAAAACAACAACATCTTTAGTGAAAAGCAATTCGGCACTAA
CCATGCTGTGATTGCCCTTACTGAAGTTGTGAGATCAGCATTAGATAATG
GTAATTTTGCAGCTGGAGTTTTCATTGATCTTAAGAAGGCTTTTGATACA
GTAGAGCATACCATCCTGCTACATAAACTGGTTCATTATGGCATCAGAGG
ACCAGCTCTTGCTTTACTCAGGTCTTATCTCTCTAATCGTACTCACTGTG
TCGATATAAGAAACACACATTCTGATCATGTCATCATCAAACATGGTGTC
CCTCAAGGATCTGTTTCGGGCCCCCTGTTATTCatcatttatattaatga
tctccATCGCTCCCTAGAAAACTCAGTAACTATTCATTTCGCTGACGACA
CTAGTCTTATTTGCTGTGATAAATCTATAAAACATCTGAACAGAAAGGTT
AACAGGGATCTTGCTCTATTGGTCCATTAGCTGAGAGCAAACAAAATATG
CCTTAACGCctcaaaaactgaaataatCCTACTTAGAAGTCCCAGGAACA
CTTTTACTAAACATCTTAATTTCAGACTCAGTGGACAAAAACTTCATCTA
TAAAGCAAAGCTAAATATCTTGGAATCCTGCTAGACGAGCATCTTTCTTG
GGAACCTCAAATTCACAGTGTCTCGAACAAACTTTCTAGAACTGTTGGCT
TCCTGTTAAAACTCAGACATTTTGTGGACTTCAAAACACTTCTTTCTGTC
TACTATGCTTTATTTGACTCACATTTAAActattgtcttcaaactttagG
TCATACCACTCAAGCCTCTTTcgaaaaaattgaagttcttcaaaataaag
cctTGAGAGTTATACACTTTAAACATAGCAGACACTCGGCTCGCCCACTC
TTTATTACATCTTCTATTTTGCCAATCAAAAAACAACTCAAAGTAAAGAA
CTGCCTTTTTGCTCTCGACCATATTCAAAATAATCTACCTAAATACTTTT
CAAACTACCTTAGATACTCTCCTGTACACGAAGGTACAAGACAGTCACCC
AAGAAACTTGAACCGCCAACAACCAATACGGTAAAGTATGGCTCTTACAG
TGTAGCTTCCCTAATAACTAAGGACTGGAACGAACTCCATACTAAGGTTT
TGATTCAAGACTTAAGCGAATGCTCTAAAaaattgaagttcttcaaaata
aagcctTGAGAGTTATACACTTTAAACATAGCAGACACTCGGCTCGCCCA
CTCTTTATTACATCTTCTATTTTGCCAATCAAAAAACAACTCAAAGTAAA
GAACTGCCTTTTTGCTCTCGACCATATTCAAAATAATCTACCTAAATACT
TTTCAAACTACCTTAGATACTCTCCTGTACACGAAGGTACAAGACAGTCA
CCCAAGAAACTTGAACCGCCAACAACCAATACGGTAAAGTATGGCTCTTA
CAGTGTAGCTTCCCTAATAACTAAGGACTGGAACGAACTCCATACTAAGG
TTTTGATTCAAGACTTAAGCGAATGCTCTAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000347_pilon | genome | sc0000347_pilon:202415..206213 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1219-1569:3449 |
| Aaloc | 799-1215:796 |
| Aaloc | 1-795:1 |
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