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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:197992..202330- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027430 ID=XLOC_027430|Name=XLOC_027430|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4339bp|location=Sequence derived from alignment at sc0000124_pilon:197992..202330- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGTTGCTATTAGCAACAAAGTGAGGTTTACAAATGGCGACATTTTTGC
TCCACTTCAAGTCCACTTGGCGATGACTGGAAAAGAAACAGAGATGAGAG
TTATGTGGAATTCTGCTGAAGGTACTTAAGTCCTTAAAAATAGCAATTTG
TTTGCCTAGTCACTTAAGTTGTTATGCTTGAAGGATACAGAACTCAGTAT
CCTTTAAAAAGGAAAAGAACAGGGCCTGAAAGTAATGGTTGGTAGATAGC
GATATATTTATAAAGCCCGAAGGGCTAGATGACGAGATGTCGTGCTTTGG
CTGAAAAGTGTGCCGAAGTTAGGTAGGAAATCGTACCTAGGTCGGAAATC
CTACCTAGGTCGCAAATCCTACCTAGTTCACGTGACCTTACAATAGAATT
TCAGTGCTTGACCAATAAGAAGTTTCACGGGTTTTCGAAAACAATAGCAG
TAATATTTTTTGCGATATTCACATTTTTTTGCTTTGAAGAGTTTAAAGCA
CGGCATCTAGCACTTGGGGCTTTACAGAAATCTGTGAGACAGGGCTTTTA
GATAATCTTTTGATTGTTTTGACGGAAGGGGCCCAGGGGGAGGAGACTCG
GCTATTTATGAACTGAACTGAAGGGAACATTGAAGCATTCCAACCGGCAA
CTCCTTGTTTGTGGAGCTAAAGCCTGAGACCAGTTGTTCATTTCTCCTCA
AAAAACCCTATAAAGGTGTTCTTGTAAGTTTGTCTCAAATTAAGGATATT
TTCCTTTTCATTTATCAGTCTCTGAAGGCATCCAAGTACGTTATGGTAAA
ACAAAAGACCTTGACAAAACACAAACGAAATATACCGTCAAAACTTACAA
AGCTTCAGACATGTGCGAATCGCCTGCTAACACAACTGGATTTTGGGATG
CTGGGTATATTTATGATGTTTTGTTGACTGACTTGGAACCCAACACGAGA
TATTATTACTCCTGTGGTAGTAAAGAGGTAAAAATAAATACCAAGAAAAG
ACCTTATTGAAGCTCAAGCTAGAACAATAGCCACTTGAAAATTCCACTTA
ATAATTTCGTCCCCTAATTTTAGTGTCAAAGGTTTTTCTTCAATCTTTAA
TAACGACAATAATGTGGAGTCTTTTAATGAAACAGCAGAAGGAAGGTCTG
TTGGAAAGAACGCCCTTTTAAGCATTTTGTTTCGGTTGATGAACACCAGA
TCTATTTTCGACATCTTTAAGCAATTTTAAAAGTAAACCTTATATACGTG
TATTTCGATCACAATCTTAGAATTTCCTTGATCCAAATAAACATCAAAAG
TTAAACTTTCCTCTTTTCAATACAAAGGAATTCAGTATTTATATATCTTG
AGAAAAAGTAAACTCGGAGTGTGTTGAGCCCTTTCGTAATACTCTTGTTG
CCGGATCTTGAAAAAAATGATCCATTTTTTGTCTCCACATTTCAGTTTAT
GACGTCAGTGTACAACTTTACAACTGTGATCAAAGGAGGAGATAAGACTC
CTTTCAAATTTATCGCTTTTGGTGACATGGGAATCACCTCCCAAGCTGAA
ACAACCACCAAATCAGTTCGCCAAGAGATCGAGAATAACGATGTGAAATT
TGTTTACCATGCCGGAGACATCTCGTACGCTCGTGGATATGTAAGAATCT
TTTGTCATTGAAAATTTAAACTTCATGTAAACTTTATGTAAAAACACTTA
ATTTACATGAAAATCTTTAAACTTTCAGCGTACATTAATCTTCTATCTCG
GACAGATTTCCGTCTCAAGGCCATGGCAAACCAGTCCAACATTTCATGCA
ACTTTATATCCAGTGCTACATGGAGTCTTTCATCTACAAATGTTGGATGA
AATGTTTGATTGCGAACAAACTTCATCGAACACGTTATTTTCTACTTTTT
TTGAATTTTCCTTTTTTTTTGAAAATTTTACATTTCCACCAACTGTTCAA
GAATTTCATCCATCATTCGAAAAATAGCATGCTAGATGAAATGTTGCACC
GGTTTGCCCTGGTCTTTATTGATTACTATCTGAGTGAAAAAAACTTTGCT
TTCATCTACCGACTATTTGAACTATTTTACTACTGACCTTTTTGTGTATG
GTACAAATATTTCCTCTCCTTTCTCCTAAGGCGTACCTGTGGGATCAATG
GTTTCACGAGATTCAACCAATGTCCGCTTTGGCTCCATACATGATTAACC
TGGGTAACCATGAGTACCAACACATCTATGCATTTGATAAAGACCCTTCT
CACCAACCGATGTGGCATCCATCATGGTATAACGGAGGTCAAGGATCTTT
CGGTGAATGTGCTATTCCAATGGTTAATCGATTTCATATGCCTGATAATG
GACTCGGTATATTCTGGTATGTGTTTCCTGAAACATGTTTATGTAATCTT
AGTATTTATAAAAGAACATCGAGGATTATGAAAAGTTTCAAAATGTAAAT
AAGAGATTGGATCTTTTTTCCATTCAATTTGATTTTGGAAATTTTTGATG
ATTTTGATTATTGATATCTATACATACACTATTTCATAGTGATTTTTCTC
TTATTTGTTTTCTTAGGCATAGTTATAACGTTGGTTTCATTCACATGGTC
TCCATCAGCTCTGAGCACGATTACCGAGAAGGTTCACTACAATATAGATG
GTTGGAAAATGATCTGAAGAATGTCGATCGCACCAAAACACCTTTTGTGA
TCGTTAGCGCCCATCGACCGATGTATTGCAGTGAATATTACCCAGGTGAG
GTCAAAATTACGAAAATTGCAATGAAATCTTTAATTTTGTGATTTTCAAC
TTCTCAAAAGTTACTGGAAAGCGCCTACTCTTAGGTGCCAAATAAACGGC
CCCCCCCCCCCGCTTCTTAATTTTTCGATTTTTTTTCCAACCCCCCCCCC
CCCGGACGTTATTAGGACCCCCCCCCCCCCCGTTTATTAATTTTTGAAAA
AATTCCCAGCTCCCAAAAGGAAAGTTTCTTGTTTTACTCTAAAAAGCCTA
AATTTAGTCTATTTTGACACTTTTAGGGTTTTCAAAAGTCCATTTTCCAA
CCCCCCCGGTAATTAGGTCCCCATTAGGGGCACTCAAGGTAAATGACCTA
CCAGACGTTCGGCCCTTAAGGGTAGGTTTTTCATAGTTCAGCTAGTGCAC
TGTAAGGGTAGGAAATTACAAAACTGCACTGAACTGCACTGTAAGGGTAG
GAAATTGTGATAAAAGGTCAATTTTTTAGTAAAATTGGCACAAAATTGGT
CAATTTTGGAGGAAAAATTCCACATTTTCTTGAAAAATTGCAAATGTTTT
CACCCTTACGGGCGAGAAATTTTGAAAAAGTGCACTGTAAGGGTATGATT
TTTCATGGAAATTCACTGCACTGTAAGGGTCCGATTTTAGAAGCCAAATT
TTGGGCCGAACGTATGATCGTTTTCAGATCGAGTGCCCCCCCCCCGGGGG
TCCTCCCCGTTTATTTGATTTGAAAAACTTTTCCAACCCCCCCCCCCCGT
TAATTTGGCACCTAAGAGTAAGGGGTTAATAAAATGTGTATATTCTGCAG
GAATGTGATTTTTTGGTAAAAGCTTACTTTAGGCGTACAAACTTTCGCGA
GCAGAAACTTTCGCGAAATCTACGACATTTACTTTCGCGAACTTGACAAA
AAAAAAAAAATTTTTTCGCGAATTATGTATATTTTAAGTAGAAAATCAAG
TTTTCGGTACATAAACCAGTGTTTTGATCGTTCAAATGTACTCAAACCAC
AATTGATTGACTTTTGCATAATTTCTACGCTAAATTTGATCCTTGTTATC
GTCAAAGAGTAAAGTTTGAGTAAATTTTCTTTACAGATTTCTTTTAGCGA
GCATAAACTTTTGCGAATTGCCCCCTCAAGAATTTTCAAAGACATTTACT
TTCGCGAAAAGTGCTAAAATTCGCGAAAATCGCTGCTCACGAAAGTTTGT
ACGCCTAAAGTTTTTCATGGAGATGCTAAAGTGTTTTTTCTTTTGTAGGA
CCAGATTGGACTACCATACTTGGTCAACAACAATATCTGGAAGATTTGTT
ATACAAATACCAAGTGGATGTCGGTCTTTGGGCTCACTATCACATTTACG
AACGAACGTGTAAAGTATATCGCAACGAATGCCGGGAGGACGGGATAACT
CATTTGGTGGTCGGTACAGGAGGTGTGAACTTGGAGATCAATAAATGGTT
CACAAAGGAATGGTCTAAGGTGCGTGACGCTGATTTTGGTTACGGTCGGT
TCTCGGTAACAAATTCCACTCATCTTTGGTTCGAATTCGTGAAACTTAAC
ACTGGCAAAGTTGGCGACTCGGTTTGGATCACCAAATAA Coding sequence (CDS) from alignment at sc0000124_pilon:197992..202330- >XLOC_027430 ID=XLOC_027430|Name=XLOC_027430|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2562bp|location=Sequence derived from alignment at sc0000124_pilon:197992..202330- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGTTGCTATTAGCAACAAAGTGAGGTTTACAAATGGCGACATTTTTGC
TCCACTTCAAGTCCACTTGGCGATGACTGGAAAAGAAACAGAGATGAGAG
TTATGTGGAATTCTGCTGAAGTTAGTTGCTATTAGCAACAAAGTGAGGTT
TACAAATGGCGACATTTTTGCTCCACTTCAAGTCCACTTGGCGATGACTG
GAAAAGAAACAGAGATGAGAGTTATGTGGAATTCTGCTGAAGTCTCTGAA
GGCATCCAAGTACGTTATGGTAAAACAAAAGACCTTGACAAAACACAAAC
GAAATATACCGTCAAAACTTACAAAGCTTCAGACATGTGCGAATCGCCTG
CTAACACAACTGGATTTTGGGATGCTGGGTATATTTATGATGTTTTGTTG
ACTGACTTGGAACCCAACACGAGATATTATTACTCCTGTGGTAGTAAAGA
GTCTCTGAAGGCATCCAAGTACGTTATGGTAAAACAAAAGACCTTGACAA
AACACAAACGAAATATACCGTCAAAACTTACAAAGCTTCAGACATGTGCG
AATCGCCTGCTAACACAACTGGATTTTGGGATGCTGGGTATATTTATGAT
GTTTTGTTGACTGACTTGGAACCCAACACGAGATATTATTACTCCTGTGG
TAGTAAAGAGTTTATGACGTCAGTGTACAACTTTACAACTGTGATCAAAG
GAGGAGATAAGACTCCTTTCAAATTTATCGCTTTTGGTGACATGGGAATC
ACCTCCCAAGCTGAAACAACCACCAAATCAGTTCGCCAAGAGATCGAGAA
TAACGATGTGAAATTTGTTTACCATGCCGGAGACATCTCGTACGCTCGTG
GATATTTTATGACGTCAGTGTACAACTTTACAACTGTGATCAAAGGAGGA
GATAAGACTCCTTTCAAATTTATCGCTTTTGGTGACATGGGAATCACCTC
CCAAGCTGAAACAACCACCAAATCAGTTCGCCAAGAGATCGAGAATAACG
ATGTGAAATTTGTTTACCATGCCGGAGACATCTCGTACGCTCGTGGATAT
GCGTACCTGTGGGATCAATGGTTTCACGAGATTCAACCAATGTCCGCTTT
GGCTCCATACATGATTAACCTGGGTAACCATGAGTACCAACACATCTATG
CATTTGATAAAGACCCTTCTCACCAACCGATGTGGCATCCATCATGGTAT
AACGGAGGTCAAGGATCTTTCGGTGAATGTGCTATTCCAATGGTTAATCG
ATTTCATATGCCTGATAATGGACTCGGTATATTCTGGCGTACCTGTGGGA
TCAATGGTTTCACGAGATTCAACCAATGTCCGCTTTGGCTCCATACATGA
TTAACCTGGGTAACCATGAGTACCAACACATCTATGCATTTGATAAAGAC
CCTTCTCACCAACCGATGTGGCATCCATCATGGTATAACGGAGGTCAAGG
ATCTTTCGGTGAATGTGCTATTCCAATGGTTAATCGATTTCATATGCCTG
ATAATGGACTCGGTATATTCTGGCATAGTTATAACGTTGGTTTCATTCAC
ATGGTCTCCATCAGCTCTGAGCACGATTACCGAGAAGGTTCACTACAATA
TAGATGGTTGGAAAATGATCTGAAGAATGTCGATCGCACCAAAACACCTT
TTGTGATCGTTAGCGCCCATCGACCGATGTATTGCAGTGAATATTACCCA
GGCATAGTTATAACGTTGGTTTCATTCACATGGTCTCCATCAGCTCTGAG
CACGATTACCGAGAAGGTTCACTACAATATAGATGGTTGGAAAATGATCT
GAAGAATGTCGATCGCACCAAAACACCTTTTGTGATCGTTAGCGCCCATC
GACCGATGTATTGCAGTGAATATTACCCAGGACCAGATTGGACTACCATA
CTTGGTCAACAACAATATCTGGAAGATTTGTTATACAAATACCAAGTGGA
TGTCGGTCTTTGGGCTCACTATCACATTTACGAACGAACGTGTAAAGTAT
ATCGCAACGAATGCCGGGAGGACGGGATAACTCATTTGGTGGTCGGTACA
GGAGGTGTGAACTTGGAGATCAATAAATGGTTCACAAAGGAATGGTCTAA
GGTGCGTGACGCTGATTTTGGTTACGGTCGGTTCTCGGTAACAAATTCCA
CTCATCTTTGGTTCGAATTCGTGAAACTTAACACTGGCAAAGTTGGCGAC
TCGGTTTGGATCACCAAATAAGACCAGATTGGACTACCATACTTGGTCAA
CAACAATATCTGGAAGATTTGTTATACAAATACCAAGTGGATGTCGGTCT
TTGGGCTCACTATCACATTTACGAACGAACGTGTAAAGTATATCGCAACG
AATGCCGGGAGGACGGGATAACTCATTTGGTGGTCGGTACAGGAGGTGTG
AACTTGGAGATCAATAAATGGTTCACAAAGGAATGGTCTAAGGTGCGTGA
CGCTGATTTTGGTTACGGTCGGTTCTCGGTAACAAATTCCACTCATCTTT
GGTTCGAATTCGTGAAACTTAACACTGGCAAAGTTGGCGACTCGGTTTGG
ATCACCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:197992..202330 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 943-1281:340 |
| Aaloc | 763-939:1773 |
| Aaloc | 526-759:2210 |
| Aaloc | 331-525:2895 |
| Aaloc | 124-330:3570 |
| Aaloc | 1-120:4340 |
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