XLOC_027424 (mRNA) -

Overview
NameXLOC_027424
Unique NameXLOC_027424
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000265_pilon:295454..296311+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027424 ID=XLOC_027424|Name=XLOC_027424|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=858bp|location=Sequence derived from alignment at sc0000265_pilon:295454..296311+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGCCGACAAGCCTCCAGTCCTCACCCTTGATGTACCTGTCGCAAT CACACCAATGTTTTTAGTTTGtcttaaatgttttaaattttctaattttc tagtTGTCCCACATATTACTGACGCTATTCAAAATTGGATCAGAGAGGTA GCAAAGAAACCTGTTGATGGCTCTGGAATAGAACCTGATATTTGTGTCAT TGAAGTaagaattgaaatttattagtCAAAAAGGATaaatgatatttaaa aaaagcttttctcATTAATTTGCCTGCTCAGatgtaaatttgaaaagtaa gaAATTTGTTGTCCATTTTATCTTTAGCTTGGAGGTGTTATTGGGGACAT TGAGGGTATGCCATACATAGAAGCAATGCGACAACTCCAATTTAAAGTTG GcgcaaaagatttAATTGTCATGTCAGTTTGATTCCTGAGGTAAGTAATT AATACTTGATACAGTGTAGGCAAACCTGGATTTGGTCTAGACAAATCTAG TCAAATTATAGAATCATCTTTGTGACATTATATGGAGCGTTAGACGCTAG TTTTTCGAGAGTAATAGTACTTCATTTCTTTAATGAAAAAGTTACCAACA GCTAATATGGCTTGTAACTATAACTGTATGCCTACTAACTGATAGCAAGA TAAAATGTTTTACTAATTTGAACTAAATTCTTATATCCACGTATATGCAT TTTAGACTGCAGGAGGGGAGATGAAATCCAAGCCAACACAGATGAGTGTC AGGGAACTCAGAGGTTGCGGTTTCACTCCTGATGTTGTAAGATTTACCCA CCCagatttatcttttttcttacattttactttcaaaaatctACTAATAT TTCAATAA

Coding sequence (CDS) from alignment at sc0000265_pilon:295454..296311+

>XLOC_027424 ID=XLOC_027424|Name=XLOC_027424|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=940bp|location=Sequence derived from alignment at sc0000265_pilon:295454..296311+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGCCGACAAGCCTCCAGTCCTCACCCTTGATGTACCTGTCGCAAT
CACACCAATGTTTTTAGTTTGtcttaaatgttttaaattttctaattttc
tagtTGTCCCACATATTACTGACGCTATTCAAAATTGGATCAGAGAGGTA
GCAAAGAAACCTGTTGATGGCTCTGGAATAGAACCTGATATTTGTGTCAT
TGAAATGACGGCCGACAAGCCTCCAGTCCTCACCCTTGATGTACCTGTCG
CAATCACACCAATGTTTTTAGTTTGtcttaaatgttttaaattttctaat
tttctagtTGTCCCACATATTACTGACGCTATTCAAAATTGGATCAGAGA
GGTAGCAAAGAAACCTGTTGATGGCTCTGGAATAGAACCTGATATTTGTG
TCATTGAACTTGGAGGTGTTATTGGGGACATTGAGGGTATGCCATACATA
GAAGCAATGCGACAACTCCAATTTAAAGTTGGcgcaaaagatttAATTGT
CATGTCAGTTTGATTCCTGAGCTTGGAGGTGTTATTGGGGACATTGAGGG
TATGCCATACATAGAAGCAATGCGACAACTCCAATTTAAAGTTGGcgcaa
aagatttAATTGTCATGTCAGTTTGATTCCTGAGACTGCAGGAGGGGAGA
TGAAATCCAAGCCAACACAGATGAGTGTCAGGGAACTCAGAGGTTGCGGT
TTCACTCCTGATGTTGTAAGATTTACCCACCCagatttatcttttttctt
acattttactttcaaaaatctACTAATATTTCAATAAACTGCAGGAGGGG
AGATGAAATCCAAGCCAACACAGATGAGTGTCAGGGAACTCAGAGGTTGC
GGTTTCACTCCTGATGTTGTAAGATTTACCCACCCagatttatctttttt
cttacattttactttcaaaaatctACTAATATTTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027424XLOC_027424-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000265_pilongenomesc0000265_pilon:295454..296311 +
Properties
Property NameValue
Aaloc322-474:706
Aaloc301-321:420
Aaloc292-294:417
Aaloc205-291:328
Aaloc1-204:1