XLOC_027400 (mRNA) -

Overview
NameXLOC_027400
Unique NameXLOC_027400
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000634_pilon:5322..6083-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027400 ID=XLOC_027400|Name=XLOC_027400|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=762bp|location=Sequence derived from alignment at sc0000634_pilon:5322..6083- (Clytia hemisphaerica_ch_hm2_pilon)
ACAATACTGAAGTCTGAATCGGGTTATTGTAGTCTAATGAAGATTAAAGA GCCCATCAACAATGGTCCATGTGGGGAGAACCCGTATTGTTGGGCCTCTC CTATTTCAAGTCACGCTGTCATGAAATGCAAGCATTGTAGACTGACTTAC CATAAATTTTGTGTGGCTTGGAATGAGGAATTCTGTGGATGTGATAACCT GGTTCCTCTGGCACAAAGGTCTGTATCAAATTAGATTTGATCTTTTGTCG GCAGGCACCTCCCTTGAAAGTATCTATCTTCATAATAGCTCGAATGGTTT ATGCTTTTGGAGCTTAAGTTATGACATTAATGGGTCTAAGTTTTGTCTCA AAATTGTAAAAAGAGCTGGTTTTAGATTATATTTTCATCTTTGTTGGGGA CCGTTCTTTTTTTCTTTTTTCTCTTTTTTTTTTGGCTTGGGGTATTATTT TAACCTGGCCTAAACGTTAAGCCCATAGCCCACTGTATGAAAGCCCATGT GGCATAACAACCGCTATTAATTATTCTATTTCAATAAAATAATTCATTTT CTAAATAGAGAATTTTTTTTTCTAGTGTAAAAACAAAAATTCTCGATCCC GATACGTTCGACAAATATCTTGACATAGGAGTAGATTTCCTTGGGGTAAG AAAATATCTAGTATTTTTGTCTGTCTGGTTATCCAACGATTTGAAAATAA TTTCTGCGGTCATTTCAGACCAAGAGGGTATGTCACGTTGTTTACCAAAA ACCAATTTATAA

Coding sequence (CDS) from alignment at sc0000634_pilon:5322..6083-

>XLOC_027400 ID=XLOC_027400|Name=XLOC_027400|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=810bp|location=Sequence derived from alignment at sc0000634_pilon:5322..6083- (Clytia hemisphaerica_ch_hm2_pilon)
ACAATACTGAAGTCTGAATCGGGTTATTGTAGTCTAATGAAGATTAAAGA
GCCCATCAACAATGGTCCATGTGGGGAGAACCCGTATTGTTGGGCCTCTC
CTATTTCAAGTCACGCTGTCATGAAATGCAAGCATTGTAGACTGACTTAC
CATAAATTTTGTGTGGCTTGGAATGAGGAATTCTGTGGATGTGATAACCT
GGTTCCTCTGGCACAAAGACAATACTGAAGTCTGAATCGGGTTATTGTAG
TCTAATGAAGATTAAAGAGCCCATCAACAATGGTCCATGTGGGGAGAACC
CGTATTGTTGGGCCTCTCCTATTTCAAGTCACGCTGTCATGAAATGCAAG
CATTGTAGACTGACTTACCATAAATTTTGTGTGGCTTGGAATGAGGAATT
CTGTGGATGTGATAACCTGGTTCCTCTGGCACAAAGTGTAAAAACAAAAA
TTCTCGATCCCGATACGTTCGACAAATATCTTGACATAGGAGTAGATTTC
CTTGGGGTAAGAAAATATCTAGTATTTTTGTCTGTCTGGTTATCCAACGA
TTTGAAAATAATTTCTGCGGTCATTTCAGACCAAGAGGGTATGTCACGTT
GTTTACCAAAAACCAATTTATAATGTAAAAACAAAAATTCTCGATCCCGA
TACGTTCGACAAATATCTTGACATAGGAGTAGATTTCCTTGGGGTAAGAA
AATATCTAGTATTTTTGTCTGTCTGGTTATCCAACGATTTGAAAATAATT
TCTGCGGTCATTTCAGACCAAGAGGGTATGTCACGTTGTTTACCAAAAAC
CAATTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027400XLOC_027400-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000634_pilongenomesc0000634_pilon:5322..6083 -
Properties
Property NameValue
Aaloc220-405:187
Aaloc1-216:763