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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000316_pilon:173206..175989+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027349 ID=XLOC_027349|Name=XLOC_027349|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2784bp|location=Sequence derived from alignment at sc0000316_pilon:173206..175989+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGCCGCTGTCTTCTACAATGAATGATGTCCTTATCAAcgcaaaaaaact
gtttttcccTGATGAGAAAAACATGAAGGGGAATATTTATGATTTTGAGG
TGTCACTCTGCGACTTCAAAATGAGCGAATTTACTACAGCAGAATTTGAC
AAAACGGTTAAAGAATACAGAGATGAACATAGGCTTTCACACAAAGAAAC
ACGATttattctaaaaacaaaacaatttggTAAATTCAAGCGGCTCGAGA
ATGCACACAATCATTCAAAGCTATCAACAAATGATGATGTCGATGATGGT
TTTATCCCCAAAAAGCAGGTACATTAGCTTTATCATTGCATATAAAACAA
AACCCACGTTTTTTATCCAAACAGGTCTAAAGTGAGTTCATGGACTATTT
ATTAataattttcaccatttttgggCTTACACTTAAACATTTTAGTGTAG
AAGACAgccaaaaatgttatttttttgggcaaaatacctagttttccctt
gtttttttttcaggattttctgaaatttccacccttagtTCACTTCTTCA
TTTACCAACTTTTGCAGCgcattaaatattttgaaaagggTACCCTTAGG
GTCTGCACATACCTGTCAGTCAtttttccagcccccccccttagtcACTA
AAATTAAAACCTAGGCTACACAGGTTAATTTTAAGATCTTGATTACACGT
GtttttttCTTAAGCATAGGAATCCTTAGAGCTGAGTTTGGCATATGCCT
AAATTTTTATGGTTCTATACAATGGGGTTatactttttcctttttcagta
TACAGTAAAACTTAATAAAAAGTCcataaaaattcaacttttgtgACATA
ACTTTGAGTGCACCTCTTTTGAtgttttgggtcggaaatttccagatggg
atttggaaattttcaggttttaggtgggagaaacaagttaaggtggggat
taatttctttaggtgggatttttggtgttttgataaaagttaattaatgt
tagttttttcttatttccaatttaattataattttttctaaatttcatat
tctataaataattcttttactatactaaacttttctcctttttattttta
aacagtaagaatttttgtttagttaatcgaattagtataatttttcgtgg
ggatagcatttttagctgggatctggtaGTTTGGAttgaaggtgggaatt
ttagggttaggtgggacctaaatttttaggtgtgacctggaacccccttt
gCACACtatgaataattttttatcaccttCAAGTTTTCCTTGCATgatga
aattattatttttatatttcattttcacagaAAAGAGAATACGAACAAAA
CGAGATTGAAAATAGATCGAATGAGAAGGAAGACGAACTAGACGAGGTTG
AAAGCAGATTGAATGAGAAGGAAGACGAATCAAACAAGAAAGAAGCCAGA
TTGGAAGAGAATGGCAACAGTGATCTTTCTGGTAAGTTAGCCTGGTCAAT
GTTTAGTGGTGCTTAAGCTCAATTGGAGCGGGCtttggttaaaaaaaaaa
cggggCAAAAGGTTGCCCCCTCTATCTCTAGATTGGCttgactttttgga
cctaccccaaGTTCCAAACCTTTGATTTGTCCATCAGTCCGTCCGTATAT
AATTTTCATATGATATTTTCTTTAGTATTTGACGAATCAAAGAAGGTGAT
TGACGAAATTGATCTAACTGGGACAGTTTTTGACCTAACTACGAACTCCC
AAGAAATGATGGATAGCAACTTCGAAGAATTGAATTGTGCAAGATTGAAA
GCCTCTGAAAGATTTTCAACAATGGCTGTTGAATTTGTCTGAGACAAGAT
TTATGACCAAATGACCGATATGTATCAAAAACGACACAGTGTTTTGAACA
AACTGATCATTACTATTTTTGAAGAAGAGGGACTTGGTGATGGCATATCA
AAAGATGCATACTcagaatttttcagccaaatgTACGAAAAATTTGATGG
AGAATTTGAGAAGGTACCAACAACTATAGATGAAGATGAGCTAGTTATCA
TTGGTAGGATAATCTCCCATGCATTTATCACGTATGGAGTCTTTCCATTA
CAAATTAGCTCTGCTTCACTAACATACTATCTGTATGGTGAAGCCTCCGA
TGATGAAATTTTGGACAGCttcaagaaatttttacttccgAAAGAAGCTG
atctttttgaaaagttcaaagcTGGGCAATCTTCGCTTGACGTTATGCTT
GGCCTCATTCTAGCTGAGTACAACATATTTACAAAGCCCACTGAAGGAAA
TATCAACCAACTTATGTTAAAGGCAGGCAAAAATGCTTTACTACGAAACC
CTTGCTTCGCATTCCAAAGTCTCGTCAAAGGGATGAATGAAAACCCTATT
TGGAAAAGGTTCTCCAAACCGCATATAACGGCATGGTTTGCGTTAAATCA
AccaagtcctgaaaagttgataaaatgtctaTTGGTAACCGAAGAAAACA
AGCAAGAAGGAAAAGTGGTTACCTGGCTACACAGGTATATCAGAGGTTGC
TCTAAAGACAAGCTACATAAGCTGGTACGCTTTATTACTGGAGCCGTCTC
CATCACTCCAACAGCCATTATCAAAGTCACATTTGTTGATCAAATGGTTA
CTTCGCTGCGTCCAGGGAGTAAGACATGCTTCAAAATCTTATATGTCCCG
AGACAGTACTTTTCTTTTACAAACTTGAAATCGAATTTCGATTTTTATCT
TGACAGCAAAAGTACTTGGTCTGTCCATGATTAG Coding sequence (CDS) from alignment at sc0000316_pilon:173206..175989+ >XLOC_027349 ID=XLOC_027349|Name=XLOC_027349|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3156bp|location=Sequence derived from alignment at sc0000316_pilon:173206..175989+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGCCGCTGTCTTCTACAATGAATGATGTCCTTATCAAcgcaaaaaaact
gtttttcccTGATGAGAAAAACATGAAGGGGAATATTTATGATTTTGAGG
TGTCACTCTGCGACTTCAAAATGAGCGAATTTACTACAGCAGAATTTGAC
AAAACGGTTAAAGAATACAGAGATGAACATAGGCTTTCACACAAAGAAAC
ACGATttattctaaaaacaaaacaatttggTAAATTCAAGCGGCTCGAGA
ATGCACACAATCATTCAAAGCTATCAACAAATGATGATGTCGATGATGGT
TTTATCCCCAAAAAGCAGTTGCCGCTGTCTTCTACAATGAATGATGTCCT
TATCAAcgcaaaaaaactgtttttcccTGATGAGAAAAACATGAAGGGGA
ATATTTATGATTTTGAGGTGTCACTCTGCGACTTCAAAATGAGCGAATTT
ACTACAGCAGAATTTGACAAAACGGTTAAAGAATACAGAGATGAACATAG
GCTTTCACACAAAGAAACACGATttattctaaaaacaaaacaatttggTA
AATTCAAGCGGCTCGAGAATGCACACAATCATTCAAAGCTATCAACAAAT
GATGATGTCGATGATGGTTTTATCCCCAAAAAGCAGaAAAGAGAATACGA
ACAAAACGAGATTGAAAATAGATCGAATGAGAAGGAAGACGAACTAGACG
AGGTTGAAAGCAGATTGAATGAGAAGGAAGACGAATCAAACAAGAAAGAA
GCCAGATTGGAAGAGAATGGCAACAGTGATCTTTCTGaAAAGAGAATACG
AACAAAACGAGATTGAAAATAGATCGAATGAGAAGGAAGACGAACTAGAC
GAGGTTGAAAGCAGATTGAATGAGAAGGAAGACGAATCAAACAAGAAAGA
AGCCAGATTGGAAGAGAATGGCAACAGTGATCTTTCTGTATTTGACGAAT
CAAAGAAGGTGATTGACGAAATTGATCTAACTGGGACAGTTTTTGACCTA
ACTACGAACTCCCAAGAAATGATGGATAGCAACTTCGAAGAATTGAATTG
TGCAAGATTGAAAGCCTCTGAAAGATTTTCAACAATGGCTGTTGAATTTG
TCTGAGACAAGATTTATGACCAAATGACCGATATGTATCAAAAACGACAC
AGTGTTTTGAACAAACTGATCATTACTATTTTTGAAGAAGAGGGACTTGG
TGATGGCATATCAAAAGATGCATACTcagaatttttcagccaaatgTACG
AAAAATTTGATGGAGAATTTGAGAAGGTACCAACAACTATAGATGAAGAT
GAGCTAGTTATCATTGGTAGGATAATCTCCCATGCATTTATCACGTATGG
AGTCTTTCCATTACAAATTAGCTCTGCTTCACTAACATACTATCTGTATG
GTGAAGCCTCCGATGATGAAATTTTGGACAGCttcaagaaatttttactt
ccgAAAGAAGCTGatctttttgaaaagttcaaagcTGGGCAATCTTCGCT
TGACGTTATGCTTGGCCTCATTCTAGCTGAGTACAACATATTTACAAAGC
CCACTGAAGGAAATATCAACCAACTTATGTTAAAGGCAGGCAAAAATGCT
TTACTACGAAACCCTTGCTTCGCATTCCAAAGTCTCGTCAAAGGGATGAA
TGAAAACCCTATTTGGAAAAGGTTCTCCAAACCGCATATAACGGCATGGT
TTGCGTTAAATCAAccaagtcctgaaaagttgataaaatgtctaTTGGTA
ACCGAAGAAAACAAGCAAGAAGGAAAAGTGGTTACCTGGCTACACAGGTA
TATCAGAGGTTGCTCTAAAGACAAGCTACATAAGCTGGTACGCTTTATTA
CTGGAGCCGTCTCCATCACTCCAACAGCCATTATCAAAGTCACATTTGTT
GATCAAATGGTTACTTCGCTGCGTCCAGGGAGTAAGACATGCTTCAAAAT
CTTATATGTCCCGAGACAGTACTTTTCTTTTACAAACTTGAAATCGAATT
TCGATTTTTATCTTGACAGCAAAAGTACTTGGTCTGTCCATGATTAGTAT
TTGACGAATCAAAGAAGGTGATTGACGAAATTGATCTAACTGGGACAGTT
TTTGACCTAACTACGAACTCCCAAGAAATGATGGATAGCAACTTCGAAGA
ATTGAATTGTGCAAGATTGAAAGCCTCTGAAAGATTTTCAACAATGGCTG
TTGAATTTGTCTGAGACAAGATTTATGACCAAATGACCGATATGTATCAA
AAACGACACAGTGTTTTGAACAAACTGATCATTACTATTTTTGAAGAAGA
GGGACTTGGTGATGGCATATCAAAAGATGCATACTcagaatttttcagcc
aaatgTACGAAAAATTTGATGGAGAATTTGAGAAGGTACCAACAACTATA
GATGAAGATGAGCTAGTTATCATTGGTAGGATAATCTCCCATGCATTTAT
CACGTATGGAGTCTTTCCATTACAAATTAGCTCTGCTTCACTAACATACT
ATCTGTATGGTGAAGCCTCCGATGATGAAATTTTGGACAGCttcaagaaa
tttttacttccgAAAGAAGCTGatctttttgaaaagttcaaagcTGGGCA
ATCTTCGCTTGACGTTATGCTTGGCCTCATTCTAGCTGAGTACAACATAT
TTACAAAGCCCACTGAAGGAAATATCAACCAACTTATGTTAAAGGCAGGC
AAAAATGCTTTACTACGAAACCCTTGCTTCGCATTCCAAAGTCTCGTCAA
AGGGATGAATGAAAACCCTATTTGGAAAAGGTTCTCCAAACCGCATATAA
CGGCATGGTTTGCGTTAAATCAAccaagtcctgaaaagttgataaaatgt
ctaTTGGTAACCGAAGAAAACAAGCAAGAAGGAAAAGTGGTTACCTGGCT
ACACAGGTATATCAGAGGTTGCTCTAAAGACAAGCTACATAAGCTGGTAC
GCTTTATTACTGGAGCCGTCTCCATCACTCCAACAGCCATTATCAAAGTC
ACATTTGTTGATCAAATGGTTACTTCGCTGCGTCCAGGGAGTAAGACATG
CTTCAAAATCTTATATGTCCCGAGACAGTACTTTTCTTTTACAAACTTGA
AATCGAATTTCGATTTTTATCTTGACAGCAAAAGTACTTGGTCTGTCCAT
GATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000316_pilon | genome | sc0000316_pilon:173206..175989 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 472-1578:1678 |
| Aaloc | 319-468:1331 |
| Aaloc | 1-318:1 |
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