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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000343_pilon:23033..27310- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027308 ID=XLOC_027308|Name=XLOC_027308|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4278bp|location=Sequence derived from alignment at sc0000343_pilon:23033..27310- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACGAGGTTTAACCTGGCGTGCTTCAATCAAAAGACTTCAAGCTAA
GGCTGAAAAGGTAAGGGTTGATTTCACACCTATTTGTTAAAATTAGTTTT
CTGAGACTTGAGATCTAAATTACCTGCAAGATCAAAAATTTGCGGAATAT
CAAAGCATTCAATTCATTTTTTTGTTCACAGAGGAATTTGGTGAATTAAA
AATAATACCAAGAGAACAATGTACCTTGCATTTTACAAGAACGAAATATA
AACGAATGGTCGAATAGTCCGTGTTTTGTTGAAATATTCATTGTACTTTT
TTGTGCATTTTTTGGGTCGCCTATAAAATTCAGACAAAAGCTTTATTATT
TTACCCTGGACTAGACTGGAGTAGGAATTGTCAGATAAATACACAACATG
CTCTGTAATGTTGTTAAGATGTCACAAACCTGGTCAATCGTGTTTGAATT
GAGAATTCTTCAGGATAACCTATTGTGAAAGCTCTCTTCAAATGGAGCTT
AGTCTTTCAGCTACCTTCAGACGAAGTGCTTTGAAAGTAAGATTAGTACA
ATCATCTCTCTGTAATTCGAGTCTCTATAATTCGTATTTTTTTTTAACGG
TTCCTTCATCAGCTGGAAAGTCGTTTAAAATACTCCATGTAATACGAATT
TTCCTATAACTCGAAAAGAATCCTCAATTACTTGAAGATCACAAGAGTCA
ACTGTATATATAAAACTCCAGCTCATCTGATGGTGTTTTGCAGAAAAATT
AATTTTTTGAATTATTTCTGAATGTTTGATTCGTATAAAAGTAATAGTAC
AGCCACTAACTGAAATACGTATAGCTTGAAGTCCAGATTACCGCCGGCTA
TCTACCCGAAGGAAGGTAGGGGTGGGCGCCACTCTTTCTCCCTGGATTGC
TCCACTTACCCTTGTGATGCCTTGATCCTTATTATGATATTAACTTACAT
AATACATTAGGAGAAAAACTTTTTTAGTCTTCCCTAAACGTAATTTATTA
TATTCGATAAATCATCGACAAAAAAGAAAACTAACTTACAGTATTATTAC
CACAAAGTGCGTCATGCCGACCCAATCTTCAGGTATTTTTAATGTATCAT
TGGTTTTGCTTTCAACTAGTTGTTGAGAATATAAGATTTATTATTATAAA
AACAGTTTATTTCCGTTCAACAGCTTCAGGTCTCTTGATGATAGATATGG
TCTCATCCACTGACCTTTATGTATCCCTGGACCAAGTTACTCAATGTCGG
CCAAGCAAAATATTATGATCGGAGTTTCTTTGAAATTGGTACCCGCGTAG
AGAGCGCTAGATCTAGTTTCGCTTGTACACTAATGATGTAGCGCCGCTTG
TCGTTAGGCAAAGCTTCAAACATTACCATGGCTTCTTTGTGAGTACCGAC
TTTCAAAAAAACTTCGATTAAAGATGGCGGATATAGCTTGGTCCAGGATT
ATATAAAGGTCAGTGGTCTCATCATATGTTTTGGCTGTACTGAACCTCTT
GTACAATATTATTTAAACTCTAAAGGCAGTATCTGCAATAAAAGTTAAAA
AAAATCGAATACAAATATAACATAACTAGTTAATTTATTTTTCTCAATGG
TTGAGAATTACATGTTTTTTTATAAGAACATCCAAAATTTTTGAAGCCTT
TAGATGTTCTTAACTTTTTCAGTTTTAAGCCTAAAAATGTTTTTAACATG
TTTTTATTTTCACCATTTTGTGACCATTTTTACTCATATTCCTAAGAAAT
CGGGTATTTTCGAGTCCGCAAAGCCTTAAAACGTTCTTAACTTGTTCTTA
ACATTTTGGCCATCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAA
AAAACTTGTAGTACTCAAGCTCAAATGAAAATGCCAGACCTAATTAAAAC
TGCTAGAACAGAATAACATGAGAGAGGGGGAACTTTAATTCTTTGCGATT
GACGAATGTTGTTAGTTTATTGGACGCTTTACTTACGTCTCTGTTTATGT
GTTGTTTTGCTCTATAACTTTGGTGAGGTCGCCATCAAGATTTACTTCGT
TTCTTCAAGTCTTTTGAAATTTGTCTTTCGAAATGCCACATTCAAGGGGC
TGGAAGATTTTAAACCAGAAACTTCATGAAGTATGTTTTGTTTTCTGGTT
CCTATACACGTTTTTTTTAAGAAACACACTTTTAAGAAACACGAGGCTCA
GAATCCCTAAAAACTAAGAAACGTCTAAGAAACATGCTGAGGTTGAGAAT
GAGAAAATAACATTTTTTAAATCGTTTTTTTTTAAGAACCTTCCAATCAA
AACAATTTTTTTTTTCTTTGCATGAAAAATAGGCTGATTATGATTATAAA
CAATAGAATTACATGGAAACGAGGCCGGGCTGTATGTTTTAATTTTTATA
AGTGATTTCACCGTGAACATAAACAGTCATAAACATTGATAGAAAAAAGC
TTTTGAGCTCAAATTTTCAGCATGCACTTGTCTTTATAGGAGGAATACAA
ATATATAGTTTTCAATATGGTTTGAAGACCTTCCAAAAATACCCAACAAT
TCGGGAAAGGTGTATTACTTTCTCTAATTCGAAGACGATTCTTGGTCCCT
CGAAGATCGAATTAGAGAGAGTCAACTGCACATTTCTAACAGTTTAAACT
TCTTTCACAACGGGTTAAACTTCTTACTACAGGCACGAGTGAAGGAGGAG
AAAGAGGCGAAGAAAGCACAACTAGACGCTCGCCATGAATATCTTCTTGG
AAATATTTCCGATGCACTTAATGTCGATTACAATGAAATTGTGGAACATA
TCATTGAAGGAACACAGGTTCGTGATACCTTGATTTTATTTTTTTTCAAT
CCTGTTGAAGCATTATCTCTATTTCATGCAAGTCAAATTATACCACATCT
CTTTTAAACTCTTTATTTATTATTTATTTTATGTCAGTTTTTTTCTTTGT
AGCTTATCATTATCAGGTACTCTTTTTCGTCTGGATATTTCCGGACTGTT
CCGGATTCTTTTTCTTTCGATTACCGATTACCGAACCAGCGTCTCTTTAA
AGCTACAGATTAAGGAAAAAAAGACTGAGTGAGTTCATCCTTTGCACATT
TTTGGCAACATAATGAAGTTGAAAACCTATAATCTGGAACAACTGATGGC
AGTCAACTTTCATTAATTCGAACTCGAGAGGGTTGCCCCTCGACAGGAAC
TGAGAATTAGTTCGATTTATCAAAGATTCGAATAGTAGTAAGTCGAATTT
TAGTCCACTGTATTTATTTTCTTTAATTTCTTTGTTTGGTTTTTCAGATC
GAAACGATCACCAGTTTCTTTCGAGAAAACGGATCAAGATCCAGTTTGAT
TTTTTTCTATCAACAAATGGAAGCTACTAATGATGGAGGTTAGTAGATTT
TGATCACTGATCTCTATTTGACTGGATCGGGCTTCTCAAATGACAGAGGA
AGCGTGTCCAGTTTTAGAGCTGAATTGTCCGCCATCTTTTTTTTGATTCG
GCTCGTTAACATCGCGATTCGAATATTTTGAAATTCAAACGTTCGAAAAT
CTGATGTAAACATGCGAAATCAGCCGTTACAAGAATTTTGGATGTTCTTA
TAAACAAAAAAAACAACGTTTACCTAGAAAAAAATCTATCATGGTAATTC
GAACAGATTCGAACGTGGTTTTGGTAGCTGAGGACCAAGATATTCTAACC
CCGGGAGGCACTTGGCAAAAAAGGGTACGTGGATGAGCTGAGCGTCGAGG
TACTTTTCTCACATCTACGAGTCCCAGGTAGGATCACAAAAACGCAAAAG
TAAAAAAGGAAGTCCCTGGTAGGGTACCTTTTTGGGGGAATTTGGGAAAA
AAGAGGAAGATTTTGTGAAACTTTTCGAATTTAAGCCATCATTCAGGGTC
ATTTTTTTCAAAAAACGATTCCCACGTAGAGGGTTCATTTTTTCGGACCT
CTGTGTCACACCCCTTCGGTTGGAAAGGGTAGTATCCCCTGGGATTCTAA
CACCCGTAATGATTTCTTAAATTAAAAAGTTGTTCAGATTTTTGGTCTTT
TTTTAAAAGTATTTCTTGTGGTGAGTTTTTTGTTGTTTTTTTTTCATAGT
GGATCACATGCGTCTTGGACACGGTGGCAATCAACTGGTCAACAAAACCA
AACATAAATTATTTCTGACTGATGGATTGGCAGAAAAATTGACTGGATTC
TGTTTGTATTTCGCTAAGATCAACAAAACAAAAGAAATCACTGCACAAAA
TATACATAATGTAAGTAAGTTGGATCAG Coding sequence (CDS) from alignment at sc0000343_pilon:23033..27310- >XLOC_027308 ID=XLOC_027308|Name=XLOC_027308|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=930bp|location=Sequence derived from alignment at sc0000343_pilon:23033..27310- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACGAGGTTTAACCTGGCGTGCTTCAATCAAAAGACTTCAAGCTAA
GGCTGAAAAGATGAAACGAGGTTTAACCTGGCGTGCTTCAATCAAAAGAC
TTCAAGCTAAGGCTGAAAAGGCACGAGTGAAGGAGGAGAAAGAGGCGAAG
AAAGCACAACTAGACGCTCGCCATGAATATCTTCTTGGAAATATTTCCGA
TGCACTTAATGTCGATTACAATGAAATTGTGGAACATATCATTGAAGGAA
CACAGGCACGAGTGAAGGAGGAGAAAGAGGCGAAGAAAGCACAACTAGAC
GCTCGCCATGAATATCTTCTTGGAAATATTTCCGATGCACTTAATGTCGA
TTACAATGAAATTGTGGAACATATCATTGAAGGAACACAGATCGAAACGA
TCACCAGTTTCTTTCGAGAAAACGGATCAAGATCCAGTTTGATTTTTTTC
TATCAACAAATGGAAGCTACTAATGATGGAGATCGAAACGATCACCAGTT
TCTTTCGAGAAAACGGATCAAGATCCAGTTTGATTTTTTTCTATCAACAA
ATGGAAGCTACTAATGATGGAGTGGATCACATGCGTCTTGGACACGGTGG
CAATCAACTGGTCAACAAAACCAAACATAAATTATTTCTGACTGATGGAT
TGGCAGAAAAATTGACTGGATTCTGTTTGTATTTCGCTAAGATCAACAAA
ACAAAAGAAATCACTGCACAAAATATACATAATGTAAGTAAGTTGGATCA
GTGGATCACATGCGTCTTGGACACGGTGGCAATCAACTGGTCAACAAAAC
CAAACATAAATTATTTCTGACTGATGGATTGGCAGAAAAATTGACTGGAT
TCTGTTTGTATTTCGCTAAGATCAACAAAACAAAAGAAATCACTGCACAA
AATATACATAATGTAAGTAAGTTGGATCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000343_pilon | genome | sc0000343_pilon:23033..27310 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 289-465:178 |
| Aaloc | 196-285:982 |
| Aaloc | 61-195:1597 |
| Aaloc | 1-60:4279 |
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