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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000390_pilon:96805..101287- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027293 ID=XLOC_027293|Name=XLOC_027293|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4483bp|location=Sequence derived from alignment at sc0000390_pilon:96805..101287- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAGACAAAGGGAGTACGTCAAAAGATGAGCTATCCTGCTCCTA
CTATATTCAAAGATCTATGGCCCTATTACAGAGGGCAACAATTGAAGCAA
ATAAAGATAAAGAAGGTAACACCAACTTATTTTAAAAGGGAATAAGATAA
TTTTTTATATTTAGCTAGCTCAGAGATACCTTTTATGGCTGTTTATGGTC
CTTAGAAACACCTCCAGAATTCTTTGACCCTGGCTGTAAGTGAAAAAATT
GAATTTTTCAAAAAATTGGAAAGGCTGTTCAATATTGTTACAATTTTGTC
GGGAACAGGACAAATTTTTGGGTGGGAAGCCTGTGGAAAAATTTGAAAAT
AGAAAACCCCCCTATTAAAGGGGGGGGTTTCAGGGGGTAACCGATTCCGC
AACTCTGCCAATTTTTTCTCCAATTTCCGTCAAACCGTCTTAAATTGAAC
CAAAATTCCGTCACCGAAAATTGCTTTGAAATTCAATTTTTTTGTCGAAA
ATTCCGCAAATTTTGAATATCTTTTACCAATTCCGAAATTCCGCAAATTT
TTTTGCTAAATTCCGTTTTTCCGCACTAAAATTGTCTAATTTTCCGTCTC
CGTCAGAGAACACAGTTTCCTTAATTCCGTCTAAATCTTCCCCAAATTCC
GCCACTCCGTCCGAAAAAAGGGCAGATTCCGCTCCTCCGCCAACAGTGAA
ACCCCCCCCCCCATTAAAGTGTGATGAAACTATACTTTTTTTAAACTGGA
CCCCTTGAGGTAGAGGCCAGTATGGATTTCGTGTAGCTAACGCCAAAGAT
CTTCAGCGTACAACTGAAAGGTTTTTGGCGAAAGGAGAAAGTTTTTCAAA
ATTTTCAAAATATTGAATGAAAAATGAAAAAAAAAAAATTGATTGAGAGA
AAAAATGGAGAATTTCTCTAGGGCGGCAAAGACCATTGAGTTTAAAGCCC
GAAGGGCTAGAGTTCAATCTCTAACCTTTCTCAGGCAAGAAAAAGTGAAG
CCTTAAAAAAATGCGCCACATTTTTGACGACATATTGAATCTAGCAATCC
TTTGTTTAAGATTGATATTTTTTTCGAAACTTTGCGCTAAGTTTTAGTTT
CAATCTGTCATTTGTGTAAAAAACCAGGCGAACCGCTCAAGGCCGCGCAA
CTTTGGTAGGATTTGTTGGCTTCAAATCCTACCAAGGAGATTGACTTCTA
GCCCTTCGGGCTTTTACTTCATTGGCAAAGACCGACCGACCGACCGACCG
ACCGACCGATCAACCTACTCACTTTTTCGACCCAACGAGGACACGAAATG
AAGATATTTGTGATTGCCGCCTAGTGAGGAAATCAACAACTGCTACCTAC
AACAACCTTTAGAATGTTTGAAATCTGTGTATTACGTATTACAGATGTAG
TATTATTGAAACTGTTTAAAATCATTTCAATTGACTGAAAATAAGTATGC
ATGTCTTCCCAGAGATTGTTGGCTTCAGAATAAATATTTTTATTTGTTTT
TTTTATATTGTATGGAGGAAACCCTAACTTGAATTTTGGTATAGAAAACT
TTAAAATAAAAAAAAACTGAAAGATTTTTGACCTACCCAAAATATCCAAA
TCTGTTAAAAACAGGGAGCAAAATTTTCGTTTTATTCATCACTTTTTCAA
CAGTTGAATGGCATTTGGAATTAACTTTTTTGTTCAATTGCAGCTTTAAA
ATGGCTTATCTAAGATTGCTAAAGCTTTAAGTTAAGGAACTAAAGATTTC
CATGCAAATATGAAAAGTCTTGTCAAATAGCTTGAAACCCGAAAATCATC
GAATTTTCAAATCTCAAAATACTACTATTATTGACACTTCGACTGCCTGA
GTTTAGTTTTACCTCTTCTATGGATTATTTCATATCCCATCCTCGTTTGT
ACATTTTTTTGTATTTAAACAATTTGTTAACATTTTCAGATTAGAAATTT
TCATTTCAATGTTTTTAAACTGATGATGGTGGTCGAATGACACCGAAACG
TCTTCAATAAATTTTGATTTTATGAAAATGAAATGAAGTCGCTTCTGTAT
TTGAAATTTTTATTGAACTCATTCAGGAGAATCAATTTGATTATATCCCA
TTGTATTTTCAGACTCGTAGAAAATTAGCAGATCAATATTTTGTCAAAAT
ACACAAAAAAAGCCACTTTATCAAATGACTTCTGATATTAGTGATGATCA
TACATTCAAATTTTGATCTTTGATTTTAATTGATTTTGATATTTTGGGTA
GGTCAAAATTTTCAGTTTTTTATCATAAATTTTGATCGACCTAATGTTTT
ATATACCAAGTTATATGAAGTTAGGCTTTCCTCTATACTGTATAATAAAA
AAGAAATTGTATAAAAATACTCATCCTTTAAAAAGCCCACAATCTCTCGA
AGAAATGGTATACACGTTTTTTCTTTTATTAGAACCCAGTTTATAAGAAC
ATTGAGGCTGAAATTTGTCGAAAAATTAAGAACATCGTAAGAACATGCTC
AGCCTCAATTTGGGAAAAAATGACAAGAACTACAATTTTTCCCTCTTTTC
AAGCAGTTTTAAACAAACTTAGGAATGGATTTTCTAAATCGAGAGTCAAA
TATTGTCAAAATTTTACCAATTTTAAGTGCTCTTTATTTTGCATGATATT
GTTGATTTAGAGTAGTCGGAAAATTTAAGAACGCATCTAAGAACATTTCA
GGCTGAAAATTGCTAAAAGTAAAAAAATAAGCACATCCAGGCTCAGCTAA
ATTTTAGGTGTTCTAGTAAAAAAAAACGTGTACTTATTTTTGGCGCACCC
AGTATTTTCAAGTATTCTTAAGTTTTTAAGGTATGCCTGGGGCTTATTGG
GATTGGCAGGGTGGCCCTGTATGAAGAGAACACAAAAAAAACAATTACTC
ATTTCCACAGAAAGTTTCTTAATTATTTTTATTTGGCATGAATATATGTT
TTTTTTATAAGCAAGTGTCTGTCCCTTGATCAGGCTCAGATATGCTTAAG
ACCTTAACGAATATGCTTGCTATGCTTACGAGTCATTAATTTTCTAACAT
CATATATAATTTAATCTAAGGTGAGCTAAGGTTTGGGAAACAGTAGTGCA
GGGCTGAGTCTCAGTCTGAGATTTTGCCGAAAAGTATAAACTTTGAAACT
CTTTTTTAAACACAACATGATGTAATAAGTACATCAAATCTATAAATTAT
ATGAAAAAAAGTTATACAAGGGTGGTTAAGTTTGAGATATTCCCAGTTTA
GACTCCATTAGCAACTATATTTCAGGCTTGCTAATTATGCTTAAAATCTG
AGCCTTCATATGCCTATACAAAAGATGTAAATTAGATTCTACTCTTAATT
TAACTAGGTCTAGTGCTTTCTTTCTGAAAATTGGAGTGTATTTCTTCGAT
TAGACTAATATTTTGTTATGCTTCGACAGAAAATCTCCTATTTTGATTTG
TGTGTTTCACTCACCCTTTCTCAAAAATAAAAGGTTATCAAAGGTGCATT
GAACTTTTTTTCTTGGGAAGCCCCTGTTTGAATGTTAGCCAAAGTTTCAT
CAAAAAAAAATTTAGGTATAAATTTCGAAAACTGGGATAAAAACTGATAT
CTAATTCAAATACCAAAATTTCAGTCACTTTCAAGTTTTCCTAGAAAATC
GTAATAAAACACTTTCCACGCACAATTCAGATTTCTGTAATTTGAAACTT
TTCATAACTGGAACATTTTTTTTTACCCAATCAATAGTGGACCCCCCAAA
AATTTGGGGTACCTTAAAATAAAAAATGTCCCTAATTTACAAATTTAGGG
GGTACCTGATTTGTTTGGGTTCACACCTCATTTTTCTTACTTTCTAATAT
GTAACCATATTACTGTTTTCAGGAACTTCTTCTCAAAGTACCACAAACAG
AAGTAACCCAAGCCAAAGCCCTTTTGTCCAACAAGCAGTAACTTCTTCTT
CTCAAAGTACCACAAACAGAAATAACCCAAGCCAAAGCCCTTTTGTCCAA
CAAGCAGTAACTTCTTCTTCTCAAAGTACCACAAACAGAAGTAACCCAAG
CCAAAGCCCTTTTGTCCAACAAGCAGTAACTTCTTCTTCTCAAAGTACCA
CAAACAGAAGTAACCCAGGCCAAAGCCCTTTTGTCCGACAGCTGGATTTA
CCATCGATGATGGAATTCAGACGACAATTTCCTGGTCTGTCAAAACCAAA
ATCAGGAAAAGAAATGCAAAAAAAGTTTTTGCCAAAAAGATCAAAACCTT
ATGAGAGATTTGTTCCCAAAAAGGCAAAGCCGGCATCACCTTGGTCGCAC
AACTTTGTCTGTTTGGCAAGCACTAATTCACCAACTACTCCAAATGCAGA
AGACCTGACAGAATTAAACTTAGCAGGATTAGGCAAGAAAAGGGTCGTTT
TCACTGACAAGAATGGTGATCATGAGCATGTGAGATATATCCTTGAAGAG
CATTATCCAAAGTTAGTGTTGTTCAATTTTTAA Coding sequence (CDS) from alignment at sc0000390_pilon:96805..101287- >XLOC_027293 ID=XLOC_027293|Name=XLOC_027293|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1176bp|location=Sequence derived from alignment at sc0000390_pilon:96805..101287- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAGACAAAGGGAGTACGTCAAAAGATGAGCTATCCTGCTCCTA
CTATATTCAAAGATCTATGGCCCTATTACAGAGGGCAACAATTGAAGCAA
ATAAAGATAAAGAAGATGGATGAAGACAAAGGGAGTACGTCAAAAGATGA
GCTATCCTGCTCCTACTATATTCAAAGATCTATGGCCCTATTACAGAGGG
CAACAATTGAAGCAAATAAAGATAAAGAAGGAACTTCTTCTCAAAGAACT
TCTTCTCAAAGTACCACAAACAGAAGTAACCCAAGCCAAAGCCCTTTTGT
CCAACAAGCAGTAACTTCTTCTTCTCAAAGTACCACAAACAGAAGTAACC
CAGGCCAAAGCCCTTTTGTCCGACAGCTGGATTTACCATCGATGATGGAA
TTCAGACGACAATTTCCTGGTCTGTCAAAACCAAAATCAGGAAAAGAAAT
GCAAAAAAAGTTTTTGCCAAAAAGATCAAAACCTTATGAGAGATTTGTTC
CCAAAAAGGCAAAGCCGGCATCACCTTGGTCGCACAACTTTGTCTGTTTG
GCAAGCACTAATTCACCAACTACTCCAAATGCAGAAGACCTGACAGAATT
AAACTTAGCAGGATTAGGCAAGAAAAGGGTCGTTTTCACTGACAAGAATG
GTGATCATGAGCATGTGAGATATATCCTTGAAGAGCATTATCCAAAGTTA
GTGTTGTTCAATTTTTAAGTACCACAAACAGAAGTAACCCAAGCCAAAGC
CCTTTTGTCCAACAAGCAGTAACTTCTTCTTCTCAAAGTACCACAAACAG
AAGTAACCCAGGCCAAAGCCCTTTTGTCCGACAGCTGGATTTACCATCGA
TGATGGAATTCAGACGACAATTTCCTGGTCTGTCAAAACCAAAATCAGGA
AAAGAAATGCAAAAAAAGTTTTTGCCAAAAAGATCAAAACCTTATGAGAG
ATTTGTTCCCAAAAAGGCAAAGCCGGCATCACCTTGGTCGCACAACTTTG
TCTGTTTGGCAAGCACTAATTCACCAACTACTCCAAATGCAGAAGACCTG
ACAGAATTAAACTTAGCAGGATTAGGCAAGAAAAGGGTCGTTTTCACTGA
CAAGAATGGTGATCATGAGCATGTGAGATATATCCTTGAAGAGCATTATC
CAAAGTTAGTGTTGTTCAATTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000390_pilon | genome | sc0000390_pilon:96805..101287 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 133-588:457 |
| Aaloc | 118-129:610 |
| Aaloc | 1-114:4484 |
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