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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:347604..349992- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027267 ID=XLOC_027267|Name=XLOC_027267|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2389bp|location=Sequence derived from alignment at sc0000339_pilon:347604..349992- (Clytia hemisphaerica_ch_hm2_pilon)
GATTGTGGAACTTCATGTAAAGCAAAAGAAGAATGCGTTTCGTTTTTGTA
TTATCGAGTCCAACCACCAACCTGTACATTGCTCGATAGTCCAATCAATC
GGCATAGCGTCAGAAGGAATATGAGTGTTGATTACTACGAAATACAGGTG
ACTTGTTTTTTTTTCACAAAACTTTCGCGAGCAGAAACTTTCAATTTAAT
TCTTTATAAAAAAACCATTAAATTTTTATGGCTGGGGCTTTGGCACTAAT
TATTTGGTAATTGTTTGAATACGAGGCAAGTGATGTTCGTGACGTAATTT
ATGAAAAGGTCTATCAGGCCTATGAATAATTTGAAGGTTGAGCCCAATGC
GTTGCGCACGTTCGATAATTTTTAGATTATAGCCAAAATGAACTTCTTAT
TCTAGTACCATGGTGTTTTATGATTTTTTCATATATTTCAGAATAAATGC
AGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTACCCTCACTTCGG
AAATGATTCTTATACATGTTATTGCAAAGGAAAATCGTATGGAAAAAATT
GTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACATGTCAAGAAGTC
AAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTGGGTTGGCAGTGT
TGGTGCAAAAAACCTATTATTTTGTGATATGATAACTGATGGAGGTTAGT
TTTATCCCTACTCTACATACAGTATATAGCCCCCAAAAATAGGTGGCATC
CAATACTGTATGTAGGTTCTGATTCAAATAAGAAGTCTGACCTGGTAGTC
GAAATGAGATTATTTTGAAACCTACATTTTTTTGACCAAGGAATACTGTG
ATTATTGAACTAGGAAAGAGAATTTTTGACGAAGGGAATTTATTTATAAA
CATAATCTTTCAAATTATAATTCCAGACTATAGTCAAAATTTTAAATCGA
ACATGATTAAATTTTTTTTATATGGATAGATAGTCGCACTTGATTCTTCA
ATGACACGACGAAATTTGTCTTCCAGTTCTGCCTGTCTGCCTGACTGTTT
TCATTTCGTTTAGTCCAATGTCAGCATGAAAAATATTGTTGAAGTGAAAA
CTTTTGAAAAATAACTCAGTTTTGCTGAAGTTTGAAAGCAGAAAAAAACT
TCAAAACTAACCGGCATATTGGAGGTCATACCTTAGGCGTACAAACTTTC
GCGAGCAGAAACTTTCGCGAGGACGAAAAATCGGGAAATACACGACATAT
ACTTTCGCAAATTTAACGGAAAAACGCTTTTCGCGAGCATAAATTTTCGC
GAATCAAGACGGAATTTTCACATGAAAAAATGGCTTAGAGGGACAAATAC
TTCTTGGATTGGCTTGAAATATTTGTTCTTTGACTTATTAGTCTTTTAGC
AGGCTAAAAAGTGCCATAAAAGTTACATTTTATTCAAAGTTTGAAGTTTT
ACAGATTTTCCATTTCGTCAAGAATCTTTCGCGAGGTTAAACTTTCGCGA
ATGGCCCTTCCTAGAATTTTTAAAGACATTTACTTTCGCGAAAAGGGCCA
AAATTCGCGAAAATCGCAAAAGTTTCTGCTCCTGAAAGTTTCTGCTCCTG
AAAGTTTTTACGCTTAAAGTATACTGTTTGCACTACATTGTTTTTTCTAA
AATTTAAAATGGAGCCGAAAATCCCTTTTCAGCAAAGTCAACCCAAGATC
ATGGGGATTTATTCACACAATTAATACGGAAATAACACCCTACGTTGCAG
AAAGAGCCCTCGCGCACTTTTGTCAATTATTTCCCGCGTCGGTCTTATAA
AGACACTGTTAATTAAATATTGCTTTTTTCATGTTATATTTTAGGAGGTT
GGTTAAGAGTGGGACAAATCAATATTCGAAATAGCGAAGAGGCTAATGCT
TACAATTTCAATGCTATCGTCAAACCTTTTACCAGCTCAATTCACAACCT
GTCAACGTCCAATTATCTCTTAAGCGGACGTCGATTTGAAGTTCTAAATC
AAATGGCAAGAATCACACAATTTCGCGTTTATTGTCGCAAGGTGACACGT
GGACGCACAAACCATTACACTTTCGATGTCTCAACATCCAGTGGTTCAAA
TAACAAAATGTTTGACCATGTCTTAAAGAATGATGAACCGCCACCACTCA
ACTTATGTGGAAAAATCAAATTTCTGCCAGATGATGATTCGAAGATTCAA
ACTTTTGACTGCGCTGATTTAGTACCAATAATTGATTATGATGATAACAA
AATTCGTTACCGCTTGTATGCCGGCCTAAAAAAGGCTTCCGCTTCCACTG
GAAGAAAAACGGCCGGTACAACCGTTCTTAAATGTGATGAAAATGACAGT
AATGATAAAATTGGACAATGGATGTTCTTTATTCGATAA Coding sequence (CDS) from alignment at sc0000339_pilon:347604..349992- >XLOC_027267 ID=XLOC_027267|Name=XLOC_027267|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000339_pilon:347604..349992- (Clytia hemisphaerica_ch_hm2_pilon)
GATTGTGGAACTTCATGTAAAGCAAAAGAAGAATGCGTTTCGTTTTTGTA
TTATCGAGTCCAACCACCAACCTGTACATTGCTCGATAGTCCAATCAATC
GGCATAGCGTCAGAAGGAATATGAGTGTTGATTACTACGAAATACAGGAT
TGTGGAACTTCATGTAAAGCAAAAGAAGAATGCGTTTCGTTTTTGTATTA
TCGAGTCCAACCACCAACCTGTACATTGCTCGATAGTCCAATCAATCGGC
ATAGCGTCAGAAGGAATATGAGTGTTGATTACTACGAAATACAGAATAAA
TGCAGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTACCCTCACTT
CGGAAATGATTCTTATACATGTTATTGCAAAGGAAAATCGTATGGAAAAA
ATTGTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACATGTCAAGAA
GTCAAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTGGGTTGGCAG
TGTTGGTGCAAAAAACCTATTATTTTGTGATATGATAACTGATGGAGAAT
AAATGCAGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTACCCTCA
CTTCGGAAATGATTCTTATACATGTTATTGCAAAGGAAAATCGTATGGAA
AAAATTGTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACATGTCAA
GAAGTCAAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTGGGTTGG
CAGTGTTGGTGCAAAAAACCTATTATTTTGTGATATGATAACTGATGGAG
GAGGTTGGTTAAGAGTGGGACAAATCAATATTCGAAATAGCGAAGAGGCT
AATGCTTACAATTTCAATGCTATCGTCAAACCTTTTACCAGCTCAATTCA
CAACCTGTCAACGTCCAATTATCTCTTAAGCGGACGTCGATTTGAAGTTC
TAAATCAAATGGCAAGAATCACACAATTTCGCGTTTATTGTCGCAAGGTG
ACACGTGGACGCACAAACCATTACACTTTCGATGTCTCAACATCCAGTGG
TTCAAATAACAAAATGTTTGACCATGTCTTAAAGAATGATGAACCGCCAC
CACTCAACTTATGTGGAAAAATCAAATTTCTGCCAGATGATGATTCGAAG
ATTCAAACTTTTGACTGCGCTGATTTAGTACCAATAATTGATTATGATGA
TAACAAAATTCGTTACCGCTTGTATGCCGGCCTAAAAAAGGCTTCCGCTT
CCACTGGAAGAAAAACGGCCGGTACAACCGTTCTTAAATGTGATGAAAAT
GACAGTAATGATAAAATTGGACAATGGATGTTCTTTATTCGATAAGAGGT
TGGTTAAGAGTGGGACAAATCAATATTCGAAATAGCGAAGAGGCTAATGC
TTACAATTTCAATGCTATCGTCAAACCTTTTACCAGCTCAATTCACAACC
TGTCAACGTCCAATTATCTCTTAAGCGGACGTCGATTTGAAGTTCTAAAT
CAAATGGCAAGAATCACACAATTTCGCGTTTATTGTCGCAAGGTGACACG
TGGACGCACAAACCATTACACTTTCGATGTCTCAACATCCAGTGGTTCAA
ATAACAAAATGTTTGACCATGTCTTAAAGAATGATGAACCGCCACCACTC
AACTTATGTGGAAAAATCAAATTTCTGCCAGATGATGATTCGAAGATTCA
AACTTTTGACTGCGCTGATTTAGTACCAATAATTGATTATGATGATAACA
AAATTCGTTACCGCTTGTATGCCGGCCTAAAAAAGGCTTCCGCTTCCACT
GGAAGAAAAACGGCCGGTACAACCGTTCTTAAATGTGATGAAAATGACAG
TAATGATAAAATTGGACAATGGATGTTCTTTATTCGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:347604..349992 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 841-939:100 |
| Aaloc | 403-840:544 |
| Aaloc | 148-399:1949 |
| Aaloc | 1-147:2390 |
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