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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:2407436..2410761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027199 ID=XLOC_027199|Name=XLOC_027199|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3326bp|location=Sequence derived from alignment at sc0000019_pilon:2407436..2410761- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCCGAGAAGAGGTTCCATCAAGACTCCGTGGTCTTCGTATTATTCAT
TGTCTGGTCCTTCATCGAAATCATAAGGTATCTGTTTTCTTTTTATCACT
TTTGATTATGATACCCTTAGGGTTTTAGCCTAGAAATCTATTTTAGATTA
GCTTAGAAGCTAGATTGATTCAGCCACTTGGTATAATTTAATTTATAGAA
GTGTATTTCTCAGGTCTATTGACCTCTATGAAACAATCTTACATCTTTTT
GGTATAATGTGATGTTTAGTCGTGACAATATTCCAAAGCAAACTTTAAAA
TCCGTAGATGTAAAAATATCTTTAAAGCGCCGAAAACGCCGTTTGTCTTA
GCCTTATTTATACGGGCTTAGTTAACAAGGCTTCTTGAGTTTATCTTTTC
TAACCAAATAAATCTAACTTGAAAATTCTACTTGAGCTCAATAGGCTTGA
ACGTCAAATAAAGAAAGGAAAACAGAACGGACACTTTGCTACCTAACCAT
TACCTAACTTTTTGCTTTTTTGACGTTGCGACTTTTTCAACAAAAAATCC
CACCCGGTAAATCATTAAAAAAAAGGAAAATACAGTGCTTTCCTCGTGAA
AGATTTTTGAGTGCAATTTGTTTTTCGATCGATTCTAGGTATCCGTTTTA
CTTGCTTGGTTTATATCGATACAACAATAAAGTGATGACTTGGTTGAGAT
ATAATATCTGGATTCCTCTCTATCCCACTGGATTCACTTCGGAAGGTAGG
TGGCTTACTATAACTAGAAAGATTTCAAACTTTTGCCATTTATCATTTCA
AAAATGGGGTTCATCATTTTATCATAAAAACTGCTTGCACTTAAAGGTTT
TGTTTTTAAATAAGGGTGATATTGTTTGCTTACTCGTCAATTTTAATTTA
CAAGCTTTTTTACATGGAATTGACACGGATGTGGAGCAATATGGTCAAAA
AGAGGAAAAGAAAAACATTTTTTGTTTATATCAGCACAATATAACAATAG
GCAGAAACTGTCCTGATATAGAATATTTGTCTGATATGAAACGAAAACAC
TTATGTAAAAAACAAAACCTTTAAAATCTAAATAAATTATCTATTTCTTT
TGACGCCTCAAATTATCCTTAGGAATACAGAAATGATCGGGGAGTCAATG
ACAGCCCTGTGTTACTGACGGGGTGGGACCCTCTCCCTCTGGAAAATTTG
ACCAACATTTTGTCCCCGGTGGGAAAAAACCTACAATTTCAGCCCCACTG
GGAAATTGACTTTGATTTCAACCTATTTGAAATCTAATATGAAAAACTGA
ACTCTGAAATCATCCCTACTGGAGCAATAGAATTTCTACCCCACGGATTT
GTACTAGTAATCGTATGGTTTGGAGTGCAATTAACGATTAATCACGAGTA
ACAAAGGAGAAAATAGTAATTTGCACGAGTCCGAAGGACGAGTGCAAATT
ACGGTATTTTCTCCTTTGTTACGAGTGATTAATCGTTAATTGCACGACAA
AACATACGATTCCGAGGTAATCGTCAGTAAATAATCATTAGTAAATCATA
GTTTTGAAAAAGAATCTTCTTCTAACTTTTATATTTTTGTAAACATTCGA
AAACCTCCTTTTTGGACCTACCCCGGTGGGCTGTAGGTCCTATAAATTAA
CCTCTGTTCGTTCGTTCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTCCG
TTCGTTACTAGCTTTTCTCGGGATTGGCTCATTAGTTTTTCCTAATTTTT
GGCACAAAGATGCAAAATGGTAATGCCCAAAATGTGACGGAGCCCGATTT
TCGAAAAAAATTCATTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAA
CCGGTTTTTTTTTGGCATTTTCTCGAGATTTCATCATTATTTTTTCTGAT
TTTTTGCACAAAGATGCGTATTAACAATGTCTAAAACATGGTCTAGTCCG
ATTTTTGAGAAAAATTTATCCGGCTGAAAATGCCGGAAATATCCCGGAAA
ATCGCCGTTTTTTTGCAGATTTTTCATGGACTTTTTCCTTATATTTCGTT
TGTTTTTTCACACAAAAACATTATTGATAGCAATGCCCATCATCAAGCAT
GGTTTAATTGTCAATAAAAGTGATTTTTGAAGCCGGAACTTTCTAAAAAT
CGCCGCCGGAACAGCCATTTTCGCCGGAAAAACGGTATTTCTTTGAATTT
CGAGCTGTTGTACTTTATATTTTTTCATGAAATTTTTGCACACTGATGCA
AAATGACAATACCTAAAATGTGACGGAGCCCGATTTTTCGAAAAATATTT
TTCCGGCCGAAAATGCCAGAAAATATGCCGGAAAACCGTTTTTTTTACAT
TTTTCTCGAATTTCATCTTTAGCTTTTTTCTGATTTTTTGGCAGAAAGAT
GGTATTTGCAATGCTCAAAACATGGCCGAGTTCGATTTTTGAGAAAAAAT
TTTTTCCGGTTGAAAATGCCGGAAATCGCCGTCTTTGCAGATTTTCATTA
TATGTTTTCCTTGTATTTCTATGTTCTTCACACAAAAACATTATTGATAA
CAATGCTCACCATCAAGCATGATTCAATTGTCAATAAAACTGATTTTTGC
GACCAGAACTTTCTATTAATTTTTCCCTACAACCCTTCCCTCTCCCCCCA
TCAACAATCAATGATGAATTTATTGCGTTATGCATTTTCGCTAAACGATA
TATTTTCTGACTGATTTTTTTCTCCTCGCATTGCTATCTAACTTTCATCA
TCAGGTAGGTCCATTCAGCATCTAGCTTGTTTTCTTTTGTTTAAAAAGAA
AACATTGCAGTGTAATTTATTTGTTTTTTTTTATATTGAAGAAAAAATGT
CCTTGTTTTTTATTATATAGTAAAAAAAAGTCTCTGACACAGGACTTAGG
AGAGAAAGAATAAGGGGACAAAAGTGTCCCCCCGCCGAAGAGTACAAAAA
GTGGTAATAGTGCAATTAACGATTAATTGCACTCCTCTAAACCAATCAGA
TTCGAGTAATTTTGCACTGCTGACGATTACGATAGAAATTGTCATCTCCA
TTGTGGGAAAAACTTCCACCGGAGTTTTGACTTAGGGCTGTCAAATGGTG
TTTATTCTTGTCGAGCAACCAGTATATCGGCTAAAACGACCAACCAACTC
ACTGCTAGAAATGAAAGTTTACAATTGATTCTTTTGTTCTAGCAATTATC
ATGTATAGATCAATACCATTTTCCCTTGAGAAGAAAAGAATGGAATACAA
TATGCCGAATGCATTGAACTTTCAATTCTCATTACGCGGTTTCACCATCT
TATATTTGGTCTGCTATATACCATGT Coding sequence (CDS) from alignment at sc0000019_pilon:2407436..2410761- >XLOC_027199 ID=XLOC_027199|Name=XLOC_027199|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=636bp|location=Sequence derived from alignment at sc0000019_pilon:2407436..2410761- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCCGAGAAGAGGTTCCATCAAGACTCCGTGGTCTTCGTATTATTCAT
TGTCTGGTCCTTCATCGAAATCATAAGATGCCCGAGAAGAGGTTCCATCA
AGACTCCGTGGTCTTCGTATTATTCATTGTCTGGTCCTTCATCGAAATCA
TAAGGTATCCGTTTTACTTGCTTGGTTTATATCGATACAACAATAAAGTG
ATGACTTGGTTGAGATATAATATCTGGATTCCTCTCTATCCCACTGGATT
CACTTCGGAAGGTATCCGTTTTACTTGCTTGGTTTATATCGATACAACAA
TAAAGTGATGACTTGGTTGAGATATAATATCTGGATTCCTCTCTATCCCA
CTGGATTCACTTCGGAAGCAATTATCATGTATAGATCAATACCATTTTCC
CTTGAGAAGAAAAGAATGGAATACAATATGCCGAATGCATTGAACTTTCA
ATTCTCATTACGCGGTTTCACCATCTTATATTTGGTCTGCTATATACCAT
GTCAATTATCATGTATAGATCAATACCATTTTCCCTTGAGAAGAAAAGAA
TGGAATACAATATGCCGAATGCATTGAACTTTCAATTCTCATTACGCGGT
TTCACCATCTTATATTTGGTCTGCTATATACCATGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:2407436..2410761 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 187-318:133 |
| Aaloc | 79-183:2688 |
| Aaloc | 1-75:3327 |
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