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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000370_pilon:114061..115755- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027168 ID=XLOC_027168|Name=XLOC_027168|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1695bp|location=Sequence derived from alignment at sc0000370_pilon:114061..115755- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGAGAAGTTCACAACGCATCAGAGAAAAAACAGTCATTCAAGCAGA
TTTAAAACTTTCAAATCGTTTTGTGCTTCCGTCAACAGATCAAGCTGTCC
GACAAGTGCCGAGAAAATCGAACGACAATACAACACGTACACAAACATCT
GAAATCGTCCACAATCTGTCAAGCCACAAACTTTCTACTGCCGAACTATC
ATTGCTGGAAAGGGGGCTCATTTTCTGTCCATCGTCACCATCACCAGATC
CTGAACAGCTGCTGGATGACGTACACGCGTATTGCCGAAAACAACGATTG
AGATATCAATTTCGAAACTTGGTAGATGAACATGACGAAAAGTCTACCAA
CCCCGAGAATGCGTGTGAAGAGACCGAACGCTGCCAAATGAAATCAACGT
ACCGCAATCCATACTATGATCCAGTCGATGATAGTGAATGCCCGAATCTC
GAGAACTATCTTTCCTGTATCAAGTCGGATATTGTGAAGCTGCTTGCTGA
TGATTCCAAACGGCCGAAAAGCAACATCACAAGGGAAGAGCAACATTCTC
TTGAAAAACTCTCCAGGGACCGCAACATCATCGTTCAAAAAGCAGATAAA
GGTGGGAAAATTGTCGTGATGAACAGGACTGACTACATCGTAGCCTGCAA
TGATCAACTCGAGAATAAACATTTCTATGAACAGCTTGATACTGATTCAA
ATCAGAATTACGCAGACACCATACGAAAGGAGATTGACAATCTTAAATCG
AAATCCAAAATCACCGATAAAGAACACATCGTATTAACTGAACATTTATC
AAATCCACGAACACCAGTATTTTATGGCTTGCCAAAATTACACAAAAACT
TTTCGAAATTCCCGCCTCTAAGACCGATTGTCTCCGGCTTCTCATCCTGC
AGTAACCGACTCTCAGAATTCCTTGACGGCTTCCTGAAATACCAAGCGCA
AAAAACGAATTCTTACATTCGCGACACAAAAGACTTCCTTGTAAGATTAG
CTGATCTTCCATCGCTTCCTTCGAACACCATACTCGTTACGATGGATGTT
GCTTCACTGTACACCAACATCGATCACGAAGAAGGAGCAAATGCCTGCTT
TGATCATCTGGAACAACGCAACAAGAAATCGATCAGCTCATCTTATCTAA
AAAAGCTGATACTTCTGGTACTACGGTCAAACGTATTCCGATTTGGGTGC
AACATCTACCACCAAATCAAAGGAACCGCGATGGGTACTCCAATGGCTCC
AAACTACGCAAACCTCTTCATGGCATCATTAGAGACGAAAATGCTTGACG
AATATTACGAACTCACCAAGCTCAGACCCCTCGTTTGGTACTGCTATATC
GACGATATCTTCTTCATCTGGACCCATGGCAACGAGTCACTGAATCAGTT
TATCGATTTTTGCAATAATTTTTCGAAAAGCCGCAAAATGAAATCAACCA
TTCAATACGAGACGCATCAATCAACTGACTCCGTAAATTTCCTGGACGTC
GAGGTTCGTTTTCGTGACAGCACCATCCAGACAAGCGTGTATTCCAAAGC
AACAGATGCACACTTATACTTCAATGCCAAATCTTGTCATCCAAACCATG
TCATCAGAAACATCCCGAAGGGACAATTCATCAGAATCCGTCGAATTTGT
ACGAATGTAGCTGACTACATCAACCATGGCAAACAACTCCTTTAG Coding sequence (CDS) from alignment at sc0000370_pilon:114061..115755- >XLOC_027168 ID=XLOC_027168|Name=XLOC_027168|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3390bp|location=Sequence derived from alignment at sc0000370_pilon:114061..115755- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGAGAAGTTCACAACGCATCAGAGAAAAAACAGTCATTCAAGCAGA
TTTAAAACTTTCAAATCGTTTTGTGCTTCCGTCAACAGATCAAGCTGTCC
GACAAGTGCCGAGAAAATCGAACGACAATACAACACGTACACAAACATCT
GAAATCGTCCACAATCTGTCAAGCCACAAACTTTCTACTGCCGAACTATC
ATTGCTGGAAAGGGGGCTCATTTTCTGTCCATCGTCACCATCACCAGATC
CTGAACAGCTGCTGGATGACGTACACGCGTATTGCCGAAAACAACGATTG
AGATATCAATTTCGAAACTTGGTAGATGAACATGACGAAAAGTCTACCAA
CCCCGAGAATGCGTGTGAAGAGACCGAACGCTGCCAAATGAAATCAACGT
ACCGCAATCCATACTATGATCCAGTCGATGATAGTGAATGCCCGAATCTC
GAGAACTATCTTTCCTGTATCAAGTCGGATATTGTGAAGCTGCTTGCTGA
TGATTCCAAACGGCCGAAAAGCAACATCACAAGGGAAGAGCAACATTCTC
TTGAAAAACTCTCCAGGGACCGCAACATCATCGTTCAAAAAGCAGATAAA
GGTGGGAAAATTGTCGTGATGAACAGGACTGACTACATCGTAGCCTGCAA
TGATCAACTCGAGAATAAACATTTCTATGAACAGCTTGATACTGATTCAA
ATCAGAATTACGCAGACACCATACGAAAGGAGATTGACAATCTTAAATCG
AAATCCAAAATCACCGATAAAGAACACATCGTATTAACTGAACATTTATC
AAATCCACGAACACCAGTATTTTATGGCTTGCCAAAATTACACAAAAACT
TTTCGAAATTCCCGCCTCTAAGACCGATTGTCTCCGGCTTCTCATCCTGC
AGTAACCGACTCTCAGAATTCCTTGACGGCTTCCTGAAATACCAAGCGCA
AAAAACGAATTCTTACATTCGCGACACAAAAGACTTCCTTGTAAGATTAG
CTGATCTTCCATCGCTTCCTTCGAACACCATACTCGTTACGATGGATGTT
GCTTCACTGTACACCAACATCGATCACGAAGAAGGAGCAAATGCCTGCTT
TGATCATCTGGAACAACGCAACAAGAAATCGATCAGCTCATCTTATCTAA
AAAAGCTGATACTTCTGGTACTACGGTCAAACGTATTCCGATTTGGGTGC
AACATCTACCACCAAATCAAAGGAACCGCGATGGGTACTCCAATGGCTCC
AAACTACGCAAACCTCTTCATGGCATCATTAGAGACGAAAATGCTTGACG
AATATTACGAACTCACCAAGCTCAGACCCCTCGTTTGGTACTGCTATATC
GACGATATCTTCTTCATCTGGACCCATGGCAACGAGTCACTGAATCAGTT
TATCGATTTTTGCAATAATTTTTCGAAAAGCCGCAAAATGAAATCAACCA
TTCAATACGAGACGCATCAATCAACTGACTCCGTAAATTTCCTGGACGTC
GAGGTTCGTTTTCGTGACAGCACCATCCAGACAAGCGTGTATTCCAAAGC
AACAGATGCACACTTATACTTCAATGCCAAATCTTGTCATCCAAACCATG
TCATCAGAAACATCCCGAAGGGACAATTCATCAGAATCCGTCGAATTTGT
ACGAATGTAGCTGACTACATCAACCATGGCAAACAACTCCTTTAGATGCC
GAGAAGTTCACAACGCATCAGAGAAAAAACAGTCATTCAAGCAGATTTAA
AACTTTCAAATCGTTTTGTGCTTCCGTCAACAGATCAAGCTGTCCGACAA
GTGCCGAGAAAATCGAACGACAATACAACACGTACACAAACATCTGAAAT
CGTCCACAATCTGTCAAGCCACAAACTTTCTACTGCCGAACTATCATTGC
TGGAAAGGGGGCTCATTTTCTGTCCATCGTCACCATCACCAGATCCTGAA
CAGCTGCTGGATGACGTACACGCGTATTGCCGAAAACAACGATTGAGATA
TCAATTTCGAAACTTGGTAGATGAACATGACGAAAAGTCTACCAACCCCG
AGAATGCGTGTGAAGAGACCGAACGCTGCCAAATGAAATCAACGTACCGC
AATCCATACTATGATCCAGTCGATGATAGTGAATGCCCGAATCTCGAGAA
CTATCTTTCCTGTATCAAGTCGGATATTGTGAAGCTGCTTGCTGATGATT
CCAAACGGCCGAAAAGCAACATCACAAGGGAAGAGCAACATTCTCTTGAA
AAACTCTCCAGGGACCGCAACATCATCGTTCAAAAAGCAGATAAAGGTGG
GAAAATTGTCGTGATGAACAGGACTGACTACATCGTAGCCTGCAATGATC
AACTCGAGAATAAACATTTCTATGAACAGCTTGATACTGATTCAAATCAG
AATTACGCAGACACCATACGAAAGGAGATTGACAATCTTAAATCGAAATC
CAAAATCACCGATAAAGAACACATCGTATTAACTGAACATTTATCAAATC
CACGAACACCAGTATTTTATGGCTTGCCAAAATTACACAAAAACTTTTCG
AAATTCCCGCCTCTAAGACCGATTGTCTCCGGCTTCTCATCCTGCAGTAA
CCGACTCTCAGAATTCCTTGACGGCTTCCTGAAATACCAAGCGCAAAAAA
CGAATTCTTACATTCGCGACACAAAAGACTTCCTTGTAAGATTAGCTGAT
CTTCCATCGCTTCCTTCGAACACCATACTCGTTACGATGGATGTTGCTTC
ACTGTACACCAACATCGATCACGAAGAAGGAGCAAATGCCTGCTTTGATC
ATCTGGAACAACGCAACAAGAAATCGATCAGCTCATCTTATCTAAAAAAG
CTGATACTTCTGGTACTACGGTCAAACGTATTCCGATTTGGGTGCAACAT
CTACCACCAAATCAAAGGAACCGCGATGGGTACTCCAATGGCTCCAAACT
ACGCAAACCTCTTCATGGCATCATTAGAGACGAAAATGCTTGACGAATAT
TACGAACTCACCAAGCTCAGACCCCTCGTTTGGTACTGCTATATCGACGA
TATCTTCTTCATCTGGACCCATGGCAACGAGTCACTGAATCAGTTTATCG
ATTTTTGCAATAATTTTTCGAAAAGCCGCAAAATGAAATCAACCATTCAA
TACGAGACGCATCAATCAACTGACTCCGTAAATTTCCTGGACGTCGAGGT
TCGTTTTCGTGACAGCACCATCCAGACAAGCGTGTATTCCAAAGCAACAG
ATGCACACTTATACTTCAATGCCAAATCTTGTCATCCAAACCATGTCATC
AGAAACATCCCGAAGGGACAATTCATCAGAATCCGTCGAATTTGTACGAA
TGTAGCTGACTACATCAACCATGGCAAACAACTCCTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000370_pilon | genome | sc0000370_pilon:114061..115755 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1695:1696 |
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