XLOC_027011 (mRNA) -

Overview
NameXLOC_027011
Unique NameXLOC_027011
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000049_pilon:1635482..1636347+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027011 ID=XLOC_027011|Name=XLOC_027011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=866bp|location=Sequence derived from alignment at sc0000049_pilon:1635482..1636347+ (Clytia hemisphaerica_ch_hm2_pilon)
cagGACTTTAGCGGCTTCTCTTTCAACGAAGAAACAGGTTTATTGGAGAA GGAGATACCTAATAGAAAGAAAACATGGCTTGATGTATGTATATTATCAA AAAATCGTCATTAAGTCTTTATTTTAGTCGCCAAAGCaaaaaaaCCGTAT ATTTTGTCCTTCATTTCTCTATTGCTCTCTACTTCATTGTCACCATTATT TTGACTTAGTCATCTAGTCAAAGGTTAAAAATGttgtcataatttttttt cggaaataaGGCTTTGggacatccctgtctcacagtcccggtggaaTTCC ATAAAagttcctattgaaatcccaatttgGATCGAGATTCTTTTGTTCCA AGGTTGAAAaatccaatggggatggttttggagtgcaatttttaaacatt gaatgccgagtggggatgaaatcaaagtcaatttcccagtggggctgaat ttccagggtattttctcaccggggacgaaatctttGCCAAATATTCCAGT GGGGGCTTGAGTCTcagcaggtctgtgacacaggcgTGTTTTGGGGGTTG TATGTCTACTGAGACAGATAAAGTCTAACACTTATCGAGAATTAAATTTT CCAAACAGGTTGCCAAATACTTAATCAATTGTGGTATCAATATCAAATCT GCTGACTCAACGTCATCCTTACCCATTCATTACGCTGTTGAAAACAATTT CCCGTCAGCTGCTCTCCTGGTTAAACTAGCACCCAGTCTGCTCAATGTTC AAGATGGACGTGGACGAACGCCCATCGTTCGGGCGTTATTAAATGGAAAT GTAAAAAGTTCTTATCCTATCTCTCGGTATGCTCTTTTTTACTCTAGACG AGGAAAACTTCCTTGA

Coding sequence (CDS) from alignment at sc0000049_pilon:1635482..1636347+

>XLOC_027011 ID=XLOC_027011|Name=XLOC_027011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=684bp|location=Sequence derived from alignment at sc0000049_pilon:1635482..1636347+ (Clytia hemisphaerica_ch_hm2_pilon)
cagGACTTTAGCGGCTTCTCTTTCAACGAAGAAACAGGTTTATTGGAGAA
GGAGATACCTAATAGAAAGAAAACATGGCTTGATcagGACTTTAGCGGCT
TCTCTTTCAACGAAGAAACAGGTTTATTGGAGAAGGAGATACCTAATAGA
AAGAAAACATGGCTTGATGTTGCCAAATACTTAATCAATTGTGGTATCAA
TATCAAATCTGCTGACTCAACGTCATCCTTACCCATTCATTACGCTGTTG
AAAACAATTTCCCGTCAGCTGCTCTCCTGGTTAAACTAGCACCCAGTCTG
CTCAATGTTCAAGATGGACGTGGACGAACGCCCATCGTTCGGGCGTTATT
AAATGGAAATGTAAAAAGTTCTTATCCTATCTCTCGGTATGCTCTTTTTT
ACTCTAGACGAGGAAAACTTCCTTGAGTTGCCAAATACTTAATCAATTGT
GGTATCAATATCAAATCTGCTGACTCAACGTCATCCTTACCCATTCATTA
CGCTGTTGAAAACAATTTCCCGTCAGCTGCTCTCCTGGTTAAACTAGCAC
CCAGTCTGCTCAATGTTCAAGATGGACGTGGACGAACGCCCATCGTTCGG
GCGTTATTAAATGGAAATGTAAAAAGTTCTTATCCTATCTCTCGGTATGC
TCTTTTTTACTCTAGACGAGGAAAACTTCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027011XLOC_027011-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049_pilongenomesc0000049_pilon:1635482..1636347 +
Properties
Property NameValue
Aaloc232-336:762
Aaloc85-231:609
Aaloc1-84:1