|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000045_pilon:1209139..1210734+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026986 ID=XLOC_026986|Name=XLOC_026986|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1596bp|location=Sequence derived from alignment at sc0000045_pilon:1209139..1210734+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGAGCTCCTTGTAACCTCTTGCTAAGCTTACTAATCCCACTAATCCT
ACTAATCCTACTAAAGAAATTCAACGGTATCAACTTATCTAACTTGCACA
TCCTGCAAAATCGATCATTCTTTGTGAGTCAGTTTCACAACGACCACACC
GCTAAAATCGTTTCCATCTTTTTGACAAGCATGCCTGCatataaagtttc
aaaaactgtTTTGGGTTCTTTTAATCAAGCCAACAGAGAGATGTTTGGTG
AAACAGCCGGTACGCAATGTAGTGCTAACTGCCTCTACGCTATATTCTGG
TCCAATGTTAGACGTGTTTCTATTTGGAAAACTACTGACCTAGACAGAAT
TTTAATTGAAGGAGACAAATTATACAAACAATTAAATACAAATAGTTATT
TATCGGTAGATGAAATGCCACATTTCATTGAATCAAATGGTATTGTCACT
gagcttcattttttaaattctgaaaatggaCAAGCTAAATTGATCAATGA
CTATCCTCTGCTTCAAATTCCTCTGAGCATGGCTCCAAATCCAGACTTTG
ACGCATTGATGATCATTGAAGGTTTTACTATAGCAATTATGAGAAGGCCT
CAAggatttttcctttttgatttgCATAGTCGTAATGAATTTGGACTACT
TGAACCACTTAATGGAAAGTCTTGTCTTATAAAGTTTGAAGAcatttttg
aacttgaaaaatatattcaacatttttatttagAGGAAAATAACaaagat
aatttatttttccttaTTCAATTCATCAAAGTAGGTGAactaaaagaaga
ttttaaaaAGGTTCTTCAGCGAAGTTATTCTGGCTTTGTAAAGAAAAGTG
CAATCAAGCGAAAAAATGATTCTGATGAtggaaatgttttaaaaaagcgt
CAAAAGACACGCCAGGAAAGCAATCATAAATTTTatgagaaaaacaaaga
aattctgaaagaaaaccaaaaaaattatcgtgcattaaataaagaaagcc
aaaaagtctaccgcgtccaaaacaatgaaaaaataaaagacagcaataaa
atctaccgtaaccaaaacaaggaaaaaattaaaaaaagtaaaaaagctta
ccgcacccagaatagtgacaaaataaaagaaaacaaaaaagcctatcgtg
aacgaaacaaagaaaagcgaaaagaaacaaattctcgacagaaagagcga
atagcaaaatttaaaaCTCTCGTAAATGAAGGTCCTTTTTATATATGTGT
TTGTTGCAACCGATGTCTCTATCGACAAACTGTTGTCGAATATACACCTG
AAAACTACAATATGCCAGAAGAAAACTTTTGTTCTGAAGTAATTTCATTT
GATGGCCAATTGTATATTTGTAAGACATGCCataataaacttaaaaaaga
CAACTTACCATGCCAGTCTGTCAAAAACAAGCTCGATATTTATGAATTAC
CAGCTGAATTTCATACTCTTCGCAGGCTTGAGAAAGTTTTAATTTCTCAa
agaattttattcaaaaaaattgctaTCATGCCAAAAGGTCAGTTTCCTAA
GTTAAAAGGGTCCATTTGTAATGTACCCATCGACATAGAAGATATT Coding sequence (CDS) from alignment at sc0000045_pilon:1209139..1210734+ >XLOC_026986 ID=XLOC_026986|Name=XLOC_026986|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3192bp|location=Sequence derived from alignment at sc0000045_pilon:1209139..1210734+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGAGCTCCTTGTAACCTCTTGCTAAGCTTACTAATCCCACTAATCCT
ACTAATCCTACTAAAGAAATTCAACGGTATCAACTTATCTAACTTGCACA
TCCTGCAAAATCGATCATTCTTTGTGAGTCAGTTTCACAACGACCACACC
GCTAAAATCGTTTCCATCTTTTTGACAAGCATGCCTGCatataaagtttc
aaaaactgtTTTGGGTTCTTTTAATCAAGCCAACAGAGAGATGTTTGGTG
AAACAGCCGGTACGCAATGTAGTGCTAACTGCCTCTACGCTATATTCTGG
TCCAATGTTAGACGTGTTTCTATTTGGAAAACTACTGACCTAGACAGAAT
TTTAATTGAAGGAGACAAATTATACAAACAATTAAATACAAATAGTTATT
TATCGGTAGATGAAATGCCACATTTCATTGAATCAAATGGTATTGTCACT
gagcttcattttttaaattctgaaaatggaCAAGCTAAATTGATCAATGA
CTATCCTCTGCTTCAAATTCCTCTGAGCATGGCTCCAAATCCAGACTTTG
ACGCATTGATGATCATTGAAGGTTTTACTATAGCAATTATGAGAAGGCCT
CAAggatttttcctttttgatttgCATAGTCGTAATGAATTTGGACTACT
TGAACCACTTAATGGAAAGTCTTGTCTTATAAAGTTTGAAGAcatttttg
aacttgaaaaatatattcaacatttttatttagAGGAAAATAACaaagat
aatttatttttccttaTTCAATTCATCAAAGTAGGTGAactaaaagaaga
ttttaaaaAGGTTCTTCAGCGAAGTTATTCTGGCTTTGTAAAGAAAAGTG
CAATCAAGCGAAAAAATGATTCTGATGAtggaaatgttttaaaaaagcgt
CAAAAGACACGCCAGGAAAGCAATCATAAATTTTatgagaaaaacaaaga
aattctgaaagaaaaccaaaaaaattatcgtgcattaaataaagaaagcc
aaaaagtctaccgcgtccaaaacaatgaaaaaataaaagacagcaataaa
atctaccgtaaccaaaacaaggaaaaaattaaaaaaagtaaaaaagctta
ccgcacccagaatagtgacaaaataaaagaaaacaaaaaagcctatcgtg
aacgaaacaaagaaaagcgaaaagaaacaaattctcgacagaaagagcga
atagcaaaatttaaaaCTCTCGTAAATGAAGGTCCTTTTTATATATGTGT
TTGTTGCAACCGATGTCTCTATCGACAAACTGTTGTCGAATATACACCTG
AAAACTACAATATGCCAGAAGAAAACTTTTGTTCTGAAGTAATTTCATTT
GATGGCCAATTGTATATTTGTAAGACATGCCataataaacttaaaaaaga
CAACTTACCATGCCAGTCTGTCAAAAACAAGCTCGATATTTATGAATTAC
CAGCTGAATTTCATACTCTTCGCAGGCTTGAGAAAGTTTTAATTTCTCAa
agaattttattcaaaaaaattgctaTCATGCCAAAAGGTCAGTTTCCTAA
GTTAAAAGGGTCCATTTGTAATGTACCCATCGACATAGAAGATATTATGC
GAGCTCCTTGTAACCTCTTGCTAAGCTTACTAATCCCACTAATCCTACTA
ATCCTACTAAAGAAATTCAACGGTATCAACTTATCTAACTTGCACATCCT
GCAAAATCGATCATTCTTTGTGAGTCAGTTTCACAACGACCACACCGCTA
AAATCGTTTCCATCTTTTTGACAAGCATGCCTGCatataaagtttcaaaa
actgtTTTGGGTTCTTTTAATCAAGCCAACAGAGAGATGTTTGGTGAAAC
AGCCGGTACGCAATGTAGTGCTAACTGCCTCTACGCTATATTCTGGTCCA
ATGTTAGACGTGTTTCTATTTGGAAAACTACTGACCTAGACAGAATTTTA
ATTGAAGGAGACAAATTATACAAACAATTAAATACAAATAGTTATTTATC
GGTAGATGAAATGCCACATTTCATTGAATCAAATGGTATTGTCACTgagc
ttcattttttaaattctgaaaatggaCAAGCTAAATTGATCAATGACTAT
CCTCTGCTTCAAATTCCTCTGAGCATGGCTCCAAATCCAGACTTTGACGC
ATTGATGATCATTGAAGGTTTTACTATAGCAATTATGAGAAGGCCTCAAg
gatttttcctttttgatttgCATAGTCGTAATGAATTTGGACTACTTGAA
CCACTTAATGGAAAGTCTTGTCTTATAAAGTTTGAAGAcatttttgaact
tgaaaaatatattcaacatttttatttagAGGAAAATAACaaagataatt
tatttttccttaTTCAATTCATCAAAGTAGGTGAactaaaagaagatttt
aaaaAGGTTCTTCAGCGAAGTTATTCTGGCTTTGTAAAGAAAAGTGCAAT
CAAGCGAAAAAATGATTCTGATGAtggaaatgttttaaaaaagcgtCAAA
AGACACGCCAGGAAAGCAATCATAAATTTTatgagaaaaacaaagaaatt
ctgaaagaaaaccaaaaaaattatcgtgcattaaataaagaaagccaaaa
agtctaccgcgtccaaaacaatgaaaaaataaaagacagcaataaaatct
accgtaaccaaaacaaggaaaaaattaaaaaaagtaaaaaagcttaccgc
acccagaatagtgacaaaataaaagaaaacaaaaaagcctatcgtgaacg
aaacaaagaaaagcgaaaagaaacaaattctcgacagaaagagcgaatag
caaaatttaaaaCTCTCGTAAATGAAGGTCCTTTTTATATATGTGTTTGT
TGCAACCGATGTCTCTATCGACAAACTGTTGTCGAATATACACCTGAAAA
CTACAATATGCCAGAAGAAAACTTTTGTTCTGAAGTAATTTCATTTGATG
GCCAATTGTATATTTGTAAGACATGCCataataaacttaaaaaagaCAAC
TTACCATGCCAGTCTGTCAAAAACAAGCTCGATATTTATGAATTACCAGC
TGAATTTCATACTCTTCGCAGGCTTGAGAAAGTTTTAATTTCTCAaagaa
ttttattcaaaaaaattgctaTCATGCCAAAAGGTCAGTTTCCTAAGTTA
AAAGGGTCCATTTGTAATGTACCCATCGACATAGAAGATATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045_pilon | genome | sc0000045_pilon:1209139..1210734 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 40-1605:31 |
| Aaloc | 1-30:1 |
|
