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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000355_pilon:172922..177154- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026863.2 ID=XLOC_026863.2|Name=XLOC_026863.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4233bp|location=Sequence derived from alignment at sc0000355_pilon:172922..177154- (Clytia hemisphaerica_ch_hm2_pilon)
CTGGCTTGGACTGACTGGAAATTGTTTTTTAAATTCTATTACTGGATAAC
CCTTTTCTTTGCTCCTCTCATTGCTCTACATTACGATAATATCGCACTGA
ACACAAATCCATGGCTACTTCTGAAACTGAAATTGGCCTTGGTCAAAAGC
GTAAGTCCACTTCAACATTGCTGTTGTCAGGTCTTGGTCAGAAGCGTAGT
CGTGGAACTGGTACTTGTGATAAGTGTTCTAAACAATACACTAATCGTTC
TAAGCCCAAATTTTGCGAATGTGGAGCTCATCTTGGTGGAATGTTTGTTG
CTAAACCAAAAAAAAACAGAACCAGAGCCTGAGCTTGTGGAAATAGTTAA
CATTTCATCTGTTGGCACATTTATGTCTGCAAAGGTGTCAGTGGCTGGAG
ACCGTGCTTTTTGTTTTATATCCACAGACAACTTATCTGTCTGCCACAGC
AAAACCTGCCTCAAATTAAGGTCGAGCTATGTTTCTTCCAAAAAAGTAGA
GGAATTTACCTGTGAACATTTACGCAAAATACCAGCAAGGCAACCAGTAA
AAGTGTTTCACAAATTTGATGAAGTTGACATCAATATGATAAATTTCTCT
TTGGATATGAAGAATAAGATCAAAGAATTGCAAACCTCTATGGAAGTCTA
CCCATCTGTAGTTCAAATAAGTAGCAAAGCCTATGCAGTCAAAACTATGG
AGAACAAAACTTCTTGTCCAATGAAGTATGTTCATGTCATGATAAAAAAT
AACAAGAACACCAATAAGAATATGGTGAAGTGCACCCAGCGAAGCTGTAA
TAAAAAGATTACAAAGACAAAACAGGTATCATTTTTAATTTTTGTTCAAA
CCAATTTTAGTTTAGCCTAGATGGATAGGCCATTCGTTAAAAATTGCTTG
GTTCACGTCATCTCAACTTTGAAAAAGTGGGTCGGTCGGTCGATAAAAAA
AATGTGTTCAAAAGATATGAAGAGGGGAGTCAGGCGGGATTAAAAAATGA
GCGTTTATGTCCTCGTCCGCCATCTTGTTGAACCTACCTGGAGGTCCTAT
AAATTAACCTGTGTTTGTTTGTTTGTTCGTCTGTTACCTTTTCTGTTAAC
TTTTCTCAGGATTGAATCTAAGGATCTTTTCAGTTTTGGTACAAATGTGT
GAAATGGCGGTGAGCAAAATGTGACGGAGCCCAATTTAAAAAGAAAAATT
TTTATGGCAAATTTGGGCCAAAACCTGCTAAAAATAGGGTTTTATGCACT
TTGTGAAAAATTGGATCATTAATTTTTTCTTATTTTTTTCATGAAAGTAA
GGTTACATCATCTCAAGCAGATTTTCGTAAAAAAAAATGGTGGCTCAAAA
AACGCATGTTTGTCAATAAGAATCACTATTAATAAGCATACATCAAAGTT
CTTAGCCAATTAGTCAATTTTTTTATGAGATAGATGTTGTTTTGCTGATT
ATTGCTTACTTTTGAAGGATACTTTGTGTTTAAACATGAAATTTTGTCTG
CATTGTCTACATTGACAATTATTTAGTCATTACAGAAACTTCTCTTGAGA
AGTTTATTTCATTTAATTATTTTTTGCACAGAGCTGCATAACTATAAATC
CTCCGATGTGACAGAGATGTGACAGATTTTCGGAAAAAAATTTTTTAGTT
TAAATTTCGGCTAAAAAGAGGGTTTATTGGTCTTTGTGAAATATTGGATT
ATTAATTTTTTTGCATGAAAGTAGGGTACCATCATATATCATAATATTTT
AACAAAAATAACTTTGTTTATTCAAACAATCTAACATAACTTAAGCTTGG
TGAGAAAGTGGTGTTTAACACTAAACGCCGACATGTAACTTTATACGCGC
GCGTCTAAAACCATAAGATCTCTAGTGAGTACACTCAATAAACGCCAGCG
TTTAATTTATACGCCCGCGTTTAATGTTAAACGCCGGCGTTTATCAACTT
AGAAAAAAATATTTAAACGCGCATATCAAAAAATTTTGATTTGTGCGTTT
AAAGTTCAAAGGCACCGCAATGTAAACAAGATTAAATCTTTTTAATTTTT
TTGTAATTTTTAGTTTTTACTTTTGATTTCGTTTCACTTTTCCCCTCTTT
TACTATTTCTCTTTGCTAAAGAGCTCCTAGTGAGTACATAGATGATCTGA
AAAGTTAAACGCCTGCGTTTATCATTAGACGCGTGCGACTAAAGTGTTAA
ACGCCACTTTTTCAACAAGTGAGTACTAAGCTTTAAAGAATAGATAACTC
AATTGACACATGCAAACAAACCTCAAACAATTCCCCAGTGTATACCTTTT
TGTCAAATGTAGGGTAAAATTATGAAATATCTGGCTTTTGCAGGTTCAAG
GAAGAAAGTTTTGCATTCACAAGCACATGGTATTACTTGCAAGAAAGCTG
TCCGGTTTTAGTGAAGAGGAGTTACCAACTAATGCAGGGGAATTAACACC
TGGAATTGATAAATCTATCCAATCAAACAATTCAACCCTTCAAACTAAAG
ACATCAACAACAGCATTGGTACTCAGGCTAGTGCTTTAAAGAAAAACATC
AACTTGAGATATGTAGATATCCCTTACAAGATACCTTGTGGAGTTTTAAA
TGCACCATATAATTCAATACTCAATGACAAAATTTTTGAACCCTGTGAAA
CATCATGTAAACATTGCGACTCAAATTTGACAGAAGCAAAGTTTCCTCAA
GGGTCAAAAAACAAATCTGGAAATGGTTGGCTTGTCACAAATGTTCATCT
TTTCGTCAAAGTCAACATCAAAATAAAAAGATGTACAAATAGTAATTGTA
AGGCAATTCAAATATGCAATCCTTATGATAAAGGTGAGTTTTTATCGGTC
CTTTAAATCCTTGCTTCAGTACTGTTCAATCCTTTGATAATTAAAATTGC
AAAATCAAATACAGGCACGAGTGTTTAAAATAGCTTGAAGTTTGCAGTAG
AAAGAATTGCACATGAATAGATTGCAATAAAAAATTGCAACTATAGAATT
TAATCAGATTTAATACAAACCAAATTTTTCTAAATTATTGAACATTCTTT
ACCTTTGAGTACCTAATAGCCAAAGGAGGGGGCTAATTAACTTTTTGAAA
AATTTTCTGCTTATTAAGTTTTGTGATTTTTTCCAATCTCCTTGCTTATA
TCAAGCTATTAGGTACCTGATAGAAGACAGATGAAAATATTTTCAACAAT
GATTAATAAATGGGGCTGGACTGTTGACTGCTGACACCCGACTGACCCTA
CCTCGAAACCTGCCGACCCAAAAAATTTTATTGCCATTTTAAAGAAGATT
TTTTTTCCTTCAAAAACTTCAAACAATAAAAAATCAAAACTCGTATCTTG
TTTGTCTCAAGCATAAGAATCGTAAATTCCCTGCTAGCACTTCTGTTTTT
TATTCAAAATTAACTAAATGTAAACAAACTGTTAACCCTTCCATGGACGA
AAATTTCATAAATCGCCAAAATAAAAAAAATTCTGACCGACCAACCCACC
TCCAAAATCTAGGGTCCGGTGACGGCAAACCAACAATTTTTTAAGTCCAG
CCTGGGTTTAGAGTTTTGTTTGGTATGTTTGGTTTACTAAACATCAGGAC
TAACATACATACATCTAATTCTGAAGAGTGATTGCAGAAATCACAAAGCA
GCTGGAATTTGACAAACTTGTGAAGCCATGTAGCTATGATTGTATTTTTC
TAGGACTATTCAATGTGTGTAACAAGATAATCATTTCATTGGATATATTA
AATGAATGGAGAAGTGAATTCAAGCGAGGGTTGAAAGTAAAATGGAATCT
CTACTGAGCAGATTAGATACGGTATTTCAATATTTCAAGAAATTCAATTC
TGGAAATAGTTAATGTTTGTTTTGAATTACCCAAGTAAGCTCCCAGTATT
CTCTCCTATCACTTGTTTTGCTCCTACACAAACCACAAAAAAATATAAAG
AAAATGTAGAAGCAGGAATCAAGAGCCACCCAGTCTGACCCAGTAAAGTG
CTAAGAAAATTGAAAAGGTTCAGGCTGAAAAAAGAAATCAAGTGTCTGAG
AGTTTCTCTTCTTATATTTTCCAGTCAGCTCATCCAACCTATGGAGAATT
GCAATATATTGTTGACTTACTCTACAATGGTTATTATGGTTTTGAAGCCC
TTACCAAAAGAGATTTGAATGGTGTTATTTGTGGACTTAGTGGAATTGCA
GGGAAGATTTATTATGGTGATGGAAATGAAAAA Coding sequence (CDS) from alignment at sc0000355_pilon:172922..177154- >XLOC_026863.2 ID=XLOC_026863.2|Name=XLOC_026863.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000355_pilon:172922..177154- (Clytia hemisphaerica_ch_hm2_pilon)
CTGGCTTGGACTGACTGGAAATTGTTTTTTAAATTCTATTACTGGATAAC
CCTTTTCTTTGCTCCTCTCATTGCTCTACATTACGATAATATCGCACTGA
ACACAAATCCATGGCTACTTCTGAAACTGAAATTGGCCTTGGTCAAAAGC
GTAAGTCCACTTCAACATTGCTGTTGTCAGGTCTTGGTCAGAAGCGTAGT
CGTGGAACTGGTACTTGTGATAAGTGTTCTAAACAATACACTAATCGTTC
TAAGCCCAAATTTTGCGAATGTGGAGCTCATCTTGGTGGAATGTTTGTTG
CTAAACCAAAAAAAAACAGAACCAGAGCCTGAGCTTGTGGAAATAGTTAA
CATTTCATCTGTTGGCACATTTATGTCTGCAAAGGTGTCAGTGGCTGGAG
ACCGTGCTTTTTGTTTTATATCCACAGACAACTTATCTGTCTGCCACAGC
AAAACCTGCCTCAAATTAAGGTCGAGCTATGTTTCTTCCAAAAAAGTAGA
GGAATTTACCTGTGAACATTTACGCAAAATACCAGCAAGGCAACCAGTAA
AAGTGTTTCACAAATTTGATGAAGTTGACATCAATATGATAAATTTCTCT
TTGGATATGAAGAATAAGATCAAAGAATTGCAAACCTCTATGGAAGTCTA
CCCATCTGTAGTTCAAATAAGTAGCAAAGCCTATGCAGTCAAAACTATGG
AGAACAAAACTTCTTGTCCAATGAAGTATGTTCATGTCATGATAAAAAAT
AACAAGAACACCAATAAGAATATGGTGAAGTGCACCCAGCGAAGCTGTAA
TAAAAAGATTACAAAGACAAAACAGCTGGCTTGGACTGACTGGAAATTGT
TTTTTAAATTCTATTACTGGATAACCCTTTTCTTTGCTCCTCTCATTGCT
CTACATTACGATAATATCGCACTGAACACAAATCCATGGCTACTTCTGAA
ACTGAAATTGGCCTTGGTCAAAAGCGTAAGTCCACTTCAACATTGCTGTT
GTCAGGTCTTGGTCAGAAGCGTAGTCGTGGAACTGGTACTTGTGATAAGT
GTTCTAAACAATACACTAATCGTTCTAAGCCCAAATTTTGCGAATGTGGA
GCTCATCTTGGTGGAATGTTTGTTGCTAAACCAAAAAAAAACAGAACCAG
AGCCTGAGCTTGTGGAAATAGTTAACATTTCATCTGTTGGCACATTTATG
TCTGCAAAGGTGTCAGTGGCTGGAGACCGTGCTTTTTGTTTTATATCCAC
AGACAACTTATCTGTCTGCCACAGCAAAACCTGCCTCAAATTAAGGTCGA
GCTATGTTTCTTCCAAAAAAGTAGAGGAATTTACCTGTGAACATTTACGC
AAAATACCAGCAAGGCAACCAGTAAAAGTGTTTCACAAATTTGATGAAGT
TGACATCAATATGATAAATTTCTCTTTGGATATGAAGAATAAGATCAAAG
AATTGCAAACCTCTATGGAAGTCTACCCATCTGTAGTTCAAATAAGTAGC
AAAGCCTATGCAGTCAAAACTATGGAGAACAAAACTTCTTGTCCAATGAA
GTATGTTCATGTCATGATAAAAAATAACAAGAACACCAATAAGAATATGG
TGAAGTGCACCCAGCGAAGCTGTAATAAAAAGATTACAAAGACAAAACAG
TCAGCTCATCCAACCTATGGAGAATTGCAATATATTGTTGACTTACTCTA
CAATGGTTATTATGGTTTTGAAGCCCTTACCAAAAGAGATTTGAATGGTG
TTATTTGTGGACTTAGTGGAATTGCAGGGAAGATTTATTATGGTGATGGA
AATGAAAAATCAGCTCATCCAACCTATGGAGAATTGCAATATATTGTTGA
CTTACTCTACAATGGTTATTATGGTTTTGAAGCCCTTACCAAAAGAGATT
TGAATGGTGTTATTTGTGGACTTAGTGGAATTGCAGGGAAGATTTATTAT
GGTGATGGAAATGAAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000355_pilon | genome | sc0000355_pilon:172922..177154 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 832-990:160 |
| Aaloc | 127-831:4114 |
| Aaloc | 1-120:4234 |
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