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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:179126..183283+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026795 ID=XLOC_026795|Name=XLOC_026795|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4158bp|location=Sequence derived from alignment at sc0000098_pilon:179126..183283+ (Clytia hemisphaerica_ch_hm2_pilon)
ttcaTGGAATATAAAACCAAGTATCAAGAATCAATGAGAGATTTGCAAAA
TCAGCTTCGTCAAGCTCAAAATGTAAGACCCGTTTTCTCTCTCATTCAAA
GTTCAGACAAAATCTAGTAATGTTTTACAGATAATTTCTACTTCATTTTC
TACCATGAAATATTGTACAAGAGGAATATGAGAGAATGCTATGTCGAATT
TTTAGCTATGAAATGCTGTCcgggaattttgtgaacacaTTGGTAAAATG
GGCTAGGTCCTTAAAATCGTGACATCTGAAATATTAGAATTGCTTGGTTT
AGTTATAACAAAACATCTTTTATGCCATATCATATCACATAAGTAACCAC
GTTTTGTTTTCTCCACAACACAGGAAGCGCGAGAAGCGGCAGACAAGATG
AGTGATGAGTCAGATGTCACCGAACTTCAAGAAGCTGTTGAAATGGCCAC
CCTTGACAAGGAAATGGCCGAAGAAAAAGTACGTTTTCGTTTATGAGATG
TTGAATTTTGACCacttttgttgtattttttttgtcaatctgTTTCAAAA
AGTGATATACACTTAGTAGCTTGATTGAGTTTTTATAGATTAAACTTACT
CACCTAATTTGATTTGGAATCTTTTTACTTTTGGTCGATAGTTTGAAAGT
TTGACTCAAGAACACGATGTTTTGAAAGACAAATTTGAAGAGACTTCCTT
GGAACTTGAAATCCTCAAGAATGAAATCAGCGAAGGAGGTAGGTACAGAA
ATAAGGGTCCCCCTGTAGGTCAGCGTTGTGACACCATTCACTTTTGCata
taatttttcattgaattttgtttaaatttggGCAAAATTAGTCTTGAATA
TAGCCAGCTTTAAAGAAAACcgtttgccaaaattaaaacgttcgaactga
aaaatttcgaaacggcaaaacaaatttaacacaaaatATTACTTACTTTA
CCATGTTTACCAAGGTTCAGAAGCCGACAAGTCATAGAACGTTCAATTCA
AATGCTCTAATTTTATTCAAGGAGTGGAAAGTGTACAAGCCAATGCTCAA
ACGAAACAGATGGAACAGCAAAACATTCGATTGAAAGAAGCCCTTCTCAA
GTATGTACTCATAACTTTTGCATACAATTTCATCTTCTCCCGTGAGCCTA
TAAACAAATCTTTCTCACTTCGCTGAAATCGACTTTACTTGCTATCAAGC
TTCATTGATTTTCCAAAACCTTCGATTAAAATAAGTTTACTTTAAGGTTa
tacatttttctattttcatctgcgaatctcaaattttcagtttacTTAAA
CTCTGGGCATCCAACCTCACCAAGGCCTTGCCATTTCAGGTCATTCATAT
ATTTTGCTGGTTTTAGCTTTTTTCTTGTATCTTGATCAGAGCCCCGGGGA
ATGGGGGTACTAGGGGTGCGAGCTGGCAGGGGGTGCCGCCcaacttttga
ttttgactcCTCTGATTTGATATTGTTTACACTGGTTGTGCTAAATGGAT
AAATTTTCCTAATATGCACCttgattcaaaagtttttttaggtTAACTAC
TAAATGcaatttcaagaattatttttaacTCGTTAGACTGAAAGACATAG
CGCAAAATGACAAAGCCGAATTAGCCAGTGTGaccaaacaaaacaaagag
ttgAGTCAGCAAGTCTCCACTATTGGTGGTGAGCGAGATAAACTTCAAGA
ACGTTTGCAAGAAGCCATTGAACAGGTCGATGATCTGAAAGAACAGGTTC
GAAACACTTTTCACAACCTACCCATCCCTTCTGAAGAACGTTTGAGAATA
TTAAAGTTTAAAATTCCTTAAAGCAGGCTGAAATAATCAAATGTTTTTGT
AACATAATTTACTCATTCCGTAATTGTTGCTACATTAATAAACGgccatc
aaaatttttatatggTATGCCACTAATTTAAGATAAGACGGTTAAGGGAC
GAATTCTTTCTTGGCTGTAAAAAGAAATTCACCAAATCAATAATCAATTG
GTCTAGAAGTTCCTGTTTTGTTCATTAAAGACTTTAAGCACATAATCTTT
GGACAGATAATTTGCTCTACTGATCTTTTCTAACATTATCAAAGATTTCA
TAACTTTCTTATAGGTTGATATGGCTTTGGGAGCTGAAGAAATGGTGGAA
AAATTAACCGATAAAAATTTGGAccttgaagaaaaaattgaacagtTGGA
GGAATCTGTTCAAGATTTGGTAAGAGCAAATTACACATCTCGTAAAAACT
TATTTTAGGGCCTGTACATCATTTTCAAGGATCCATTAAATTGATAGACA
AGTCTTGCCTGGGGGACAATATCGAGTTTATTGTCTCTAAAATTAACATT
CTcctttatcattcaaactgcaGGAAGCTTTACGTGAGCTGAACATCGAG
TTGGAAGAAAGTCACGTTCAAACGGAACATGATCTTCGCGAAGAACTTGA
TATGGCCGACAGCAAGATCAGGGAGGTTAGATAATTTCTTTTACTCTTAC
CCTCCTCGTGGTCTgctttggattttttatttcatcattttttccgacgc
aaaattTCACTCAGCTTTATCTCAGCATTTGCCGTTTGCTGAAGCAAATT
TGTCTGAGCTGATGGTTAAAAAGTACTCAAGTATCAAAAATGAGGGATCA
AAATTCCTCCCTTCGACAAAAATTGTAGTTTTAAAGCTCGACATATTTCA
TCAGTACAGTTTTATAATTACATGAATTTGAAATATGACTTAAAAAGTGA
CCGGACCTAAAGCAATCCAAGGAGATTGCTAAAAGATGTCAAGTCGCTTC
CTTTTAAGTAAAtttttttCCTAGAAACGCCTTTCAAACCAGTTCAAACG
TATCCTTTGTGTTTACCAGTGTAGATGCAACAATTTTGTAAATGCTTTCC
TGTATTTACTTTCTAGTTGGAACGGACGGTGATCGCGAACATCGAACAAA
CGAACGATTACCAAGAGACCATCAGGAAGTTTCGTGAATTGGTACAACAA
CTGcaggtaaattttctttttaatcgtTTTAAAGTCGTTCCATCTATAAg
tagaatctttctataatacAAGCTGGTTTTCAAGTGGTAAGCCCGCGCAA
AAagctctctataattcgaaaaaaGAGACTTCTTGTTCGGGTTTGCGTAG
GCGAGAGTAGAAAATATAACTATAAACTGTATATTATATTATGTACTTCG
AAATCAGCACCTTCTCAATGAAGGATTaaaaaaaCTGATCAAACACTAAA
TCTTAGTTGCAACGCTTAGCGAGACATAATATCCTACTAGCTAACACAAA
CTGTTTTCCACAGGGTCGCATTAAAGATTTGCACGAACAATCATCCGACT
CTTTGAAAATCGACGACCTGGATACGACGCCCGTCCCTGAGATTGACGTC
AAAACGAAAATCGCTGAAACCAAACAGCACGGAAGAGTAAGAAATGAGTT
CTTCTTTCGTACCGAAATTAAGTTGCTCTCCCAATCTCTCTCCTCCTTAA
AGCCAAGCGCGTTCAATTTGCTGGTCATTGTTTCCGTGCCTCATCTGAGG
TTATTTCCTCCCTATTGCTTTGGAAACCTAAACGTGTGGCTCAGAGATCG
AGAAAACTTACCTTTCCGGATGTGGTGAGCAGGGATACAGGCCTTGATCT
TAGCGACCTGGGCACTGCTATGCGCAACCGCGACTCCTGGCGCCAGCGAG
TGGAATCCAttgtctcgactgcggtcgagcaatgatgatgatgaagttGC
TCTGAAAGAGATTCTAGGAAATTTACCCCCAATGAGAATTACccaagaaa
aattaacaagtgtTTATTTGTCCCTTTAAGTCtttttttCTTgttataaa
tttaatttttataaatctaaatccgcgaaatttatgATCactaaaaaaca
tatttttttcttgaattcgCGAACGTTTCTCGTAAATTCTGTGATTTTTC
AACCTCATGAAACTTTGTGGTCGCAAAAGTTTGTTCGATTAAAGTAGGTT
TGAAACAGTGTAATAGACATGTATTACCCGTTGTCTTCTTTCGATTCAAA
TGCAGATACAAACACTTataaatgatttttgatgataAATATACAATGTT
TTTTCAGGTAATTGAGTTGGAATTGAACAAATATTACGTGCGAGAAGCAA
ACAAGAAA Coding sequence (CDS) from alignment at sc0000098_pilon:179126..183283+ >XLOC_026795 ID=XLOC_026795|Name=XLOC_026795|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000098_pilon:179126..183283+ (Clytia hemisphaerica_ch_hm2_pilon)
ttcaTGGAATATAAAACCAAGTATCAAGAATCAATGAGAGATTTGCAAAA
TCAGCTTCGTCAAGCTCAAAATttcaTGGAATATAAAACCAAGTATCAAG
AATCAATGAGAGATTTGCAAAATCAGCTTCGTCAAGCTCAAAATGAAGCG
CGAGAAGCGGCAGACAAGATGAGTGATGAGTCAGATGTCACCGAACTTCA
AGAAGCTGTTGAAATGGCCACCCTTGACAAGGAAATGGCCGAAGAAAAAG
AAGCGCGAGAAGCGGCAGACAAGATGAGTGATGAGTCAGATGTCACCGAA
CTTCAAGAAGCTGTTGAAATGGCCACCCTTGACAAGGAAATGGCCGAAGA
AAAATTTGAAAGTTTGACTCAAGAACACGATGTTTTGAAAGACAAATTTG
AAGAGACTTCCTTGGAACTTGAAATCCTCAAGAATGAAATCAGCGAAGGA
GTTTGAAAGTTTGACTCAAGAACACGATGTTTTGAAAGACAAATTTGAAG
AGACTTCCTTGGAACTTGAAATCCTCAAGAATGAAATCAGCGAAGGAGGA
GTGGAAAGTGTACAAGCCAATGCTCAAACGAAACAGATGGAACAGCAAAA
CATTCGATTGAAAGAAGCCCTTCTCAAGAGTGGAAAGTGTACAAGCCAAT
GCTCAAACGAAACAGATGGAACAGCAAAACATTCGATTGAAAGAAGCCCT
TCTCAAACTGAAAGACATAGCGCAAAATGACAAAGCCGAATTAGCCAGTG
TGaccaaacaaaacaaagagttgAGTCAGCAAGTCTCCACTATTGGTGGT
GAGCGAGATAAACTTCAAGAACGTTTGCAAGAAGCCATTGAACAGGTCGA
TGATCTGAAAGAACAGACTGAAAGACATAGCGCAAAATGACAAAGCCGAA
TTAGCCAGTGTGaccaaacaaaacaaagagttgAGTCAGCAAGTCTCCAC
TATTGGTGGTGAGCGAGATAAACTTCAAGAACGTTTGCAAGAAGCCATTG
AACAGGTCGATGATCTGAAAGAACAGGTTGATATGGCTTTGGGAGCTGAA
GAAATGGTGGAAAAATTAACCGATAAAAATTTGGAccttgaagaaaaaat
tgaacagtTGGAGGAATCTGTTCAAGATTTGGTTGATATGGCTTTGGGAG
CTGAAGAAATGGTGGAAAAATTAACCGATAAAAATTTGGAccttgaagaa
aaaattgaacagtTGGAGGAATCTGTTCAAGATTTGGAAGCTTTACGTGA
GCTGAACATCGAGTTGGAAGAAAGTCACGTTCAAACGGAACATGATCTTC
GCGAAGAACTTGATATGGCCGACAGCAAGATCAGGGAGGAAGCTTTACGT
GAGCTGAACATCGAGTTGGAAGAAAGTCACGTTCAAACGGAACATGATCT
TCGCGAAGAACTTGATATGGCCGACAGCAAGATCAGGGAGTTGGAACGGA
CGGTGATCGCGAACATCGAACAAACGAACGATTACCAAGAGACCATCAGG
AAGTTTCGTGAATTGGTACAACAACTGcagTTGGAACGGACGGTGATCGC
GAACATCGAACAAACGAACGATTACCAAGAGACCATCAGGAAGTTTCGTG
AATTGGTACAACAACTGcagGGTCGCATTAAAGATTTGCACGAACAATCA
TCCGACTCTTTGAAAATCGACGACCTGGATACGACGCCCGTCCCTGAGAT
TGACGTCAAAACGAAAATCGCTGAAACCAAACAGCACGGAAGAGGTCGCA
TTAAAGATTTGCACGAACAATCATCCGACTCTTTGAAAATCGACGACCTG
GATACGACGCCCGTCCCTGAGATTGACGTCAAAACGAAAATCGCTGAAAC
CAAACAGCACGGAAGAGTAATTGAGTTGGAATTGAACAAATATTACGTGC
GAGAAGCAAACAAGAAAGTAATTGAGTTGGAATTGAACAAATATTACGTG
CGAGAAGCAAACAAGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:179126..183283 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 934-984:4108 |
| Aaloc | 811-933:3314 |
| Aaloc | 721-810:2917 |
| Aaloc | 619-720:2374 |
| Aaloc | 514-618:2115 |
| Aaloc | 355-513:1588 |
| Aaloc | 277-351:1024 |
| Aaloc | 178-273:642 |
| Aaloc | 73-177:374 |
| Aaloc | 1-72:1 |
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