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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000324_pilon:35206..40364- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026642 ID=XLOC_026642|Name=XLOC_026642|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5159bp|location=Sequence derived from alignment at sc0000324_pilon:35206..40364- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAAAATTGAAACAGATCATTTGCGAAGCCATAGACTCCAAGAA
AGATGAATTAAACAACATTAGTCAAGAAATATGGAAAAATCCTGAGTTGA
ATTTCGAAGAATTTAAAGCACATGCCTTGCTGACGTCTTACCTCGAGAAA
GAAGGGTTTGAAGTAGCAAAGAGCACTCCTTTGGAAACTTCATTTATTGC
TCGTTATGGAAAAAAAGAAGGAATAAAAGTTGGAGTGATTTGTGAATATG
ATGCATTACCTGGAGTTGGACATGCTTGCGGTCATAACTTGATCGCTGAA
GCGGGGATCGGAGCAGCATTAGGTAAGATCAACTCACAAATGATTATTGA
TTAGTAAAGATTGAGAATAGCTTGAAAAATATTTTTCATTCTTTTTACTA
CCGTAAATATTGAATTATTGTTGACGCAGTTTGGCTTTAGACTGCAAACT
TTCAAATCTTTTTTGAAGGAGTAAAGGCAAAGATTATTGGCTTTAATTTC
TACTCATCGCCCACTCTAGGTCTCAAAGCAGTAATTGATTCAAAACCTGA
TTGTGATTTTAATTTGATCGTTTATGGAACGCCAGCAGAAGAAGGGGGCG
GTGGAAAATGTTTGATGATCGAGAAAGGCGTTTTTGATGAAGCAGACATT
TGCATGATGACCCACCCATCGCCCTACGAATTACCAAGCCCCTCTTCACT
TGGTGTCGCCCAATACAAGATCGTTTTCAAAGGTAGGGCTCTGTTGAATG
AAAATATGTATCAAAGAAGAGTGTGTTTAAAGATGGAAAGAACATTTTCC
ATGGGGTTTTCAATACAATTTTAATACGGATCATCTGATAATGACTCATG
AAAATTCTTGTATTGATCATGATCTTTAAATTTTATTTGGAAGCTGAATT
ATAATGAAAATGCAAAAAAACTTGGTGTTGGTTTTGAAGATGACCATATG
AGAGAAACATATGGCCGAAGCACTCATTTGTGGGAAAATTGAATTCACAA
GGGATTGAAAGTCTCTCCAAAGCAAGATTATACGTTATAACCTTTCTCAT
TTCACATTTTCTCTTTCCTCAGGCAAAACAGCACACGCAGCAGCGGCACC
ATGGGAAGGAATCAACGCATTAGATGCCGCTGTAGCATGTTATAATAACG
TTAGTATGTTACGACAACAAATGAAACCAACTAATCGTATTCATTGCACT
ATTGTGGATGGAGGAGAAAGACCCAATATCATCCCTGAACGCGCCGAATT
GTTCTATTTCGTTCGCGCGCAAACTGATAAAGAAGTCGCGAGTATGGTCG
AACGACTCAGAGCGTGCGCTGAAGGAGCAGCCCAGGCTACAGGTTTGAAT
TTATCTTTTAATCCCCCTGAAAAGTTTTATCGATAGAATTAACCTTTCCT
ATTCGTGTTTTTTGATTTCTAATTTCAGTTCAGCTCAATTTTGACAATAC
TTGAGTGTTTGTTTGTCTATCTGTCCGCCTGTCTGGAGCAATGTGAAAGT
AAATAATGATTTTTGGGCAATGACGACGAGTTTTTCAGCATTTAAAATTT
GGAATAGTGTGGAGATTTTAAATAATGTCAGATTTTTTCCTTAAAAAATA
CCTAAAATTTTGAATTTGAATGCCAAAAAATGGTTTTTAGTTTTAGAAAT
TATAGAAATTATTGTTCAGAGGAAAGTTCTCTCTCTAAATTTTCACAGGC
TGTACAATGGACATGAAGCAAAGTGCGCCCTCTTGGTCTGCTGTCAACAC
AAATCAAGTCATGATTGATCTTTACATCGAAAATGCAAAATCACTTGGTG
TTTCTTTTGAAGACGACCATGCGAGAGAAACCTTCCAAGCGGCAACAGAT
ATGGGAAACGTTTCAGTTGTAAAACCGTCCATTCATCCTTATTACAAAAT
ACAAACAGAAGAGATAAACCACAACCATGGATTTACAAAAGCCGCTGGAT
CTGCAGAAAGTCAGTTACCAACATTGAATACTGCAAAGAGTATGGCAATG
ACCGTTATTGATATCGTTTGCGAGGAAGGACTTTTACAAAAGGTTCAGAA
AGGTTTTAAAGAATCTTTACTTTCGTGATGGAATATAACGAACATGTGAT
TGTTAAGCTTCCAAAAACACAGATATTCAGTTGTCTCTCTCTAATTCAAT
CTTCAAGGGACAAACAAAGAAAGAATTTTCTCAATTAGGGAAAGATTCGA
ATTACAGAGAGTATTTAATACGATTTTTCAGTTGAGGGGGGTAATAGTTT
AGTTCGAATTACTTTTTCAAATGAGAGAGAGTTTACTGTTCACTGTATCT
ATTTGTCATGTTTTTGTCCACTTGTAATAGTAAACTTGTAATTTTTAACT
TGCATTTTTTCACACATCCAATTTCATACACCACTCACGGGTAATTTATG
AATTTTCTATCATATAAAAAGCGACAAAAGTAATATTTTTGCAACGTTTT
TTAATAAAATAAAACTTTTAATTTTCGAAAAATTATTATTGTTGTACTAA
AATTTGTAATTTGTTTGAATGTGAAAGAATAGTACATTAACACTAAATTT
CAATTTTACAGCAAATTTAGCTCTTATTGATTGGCTTAAATTTATTTGAA
AACTTTTATAAGAAAGCTTCAATGTTATCTTGTCCGTTTTTTTTTTCAGG
GTAGAAAATGAAAGGAAAACTAAAACAGATCATTTGCGAAGCCATAGACT
CCAAGAAGGATGAACTAAACAATATCAGTCAAGAAATTTGGAAAAATCCT
GAAGTGAATTTCGAAGAATTTAAAGCACATGCCTTGCTGACGTCATATCT
TGAAAAAGAAGGGTTTGAAGTAGCAAAGAGCACTCCTTTGGAAACTTCAT
TTATTGCTCGTTATGGTAAAAAAGAAGGAATCAAAGTTGGAGTGATTTGT
GAATATGATGCATTACCTGGAGTTGGACATGCTTGCGGTCATAATTTGAT
CGCTGAAGCAGGAATCGGAGCAGCTTTAGGTAGGGAATACAGGTTCAACA
ATACCATATTCAAATAACTGATCAGAAAAGTTTGAAAACATCTTTTCACC
CACCATTCAAAGTTATGATCACCAGGGTAACTAGTAAATGTTTGGGAAAA
GAGGTGACGATACAGCCTTAAAGCCATGAAGTATGTCTTAAAAGTATGTG
AACACTTTACCTTTTCAACATTTTCTAAGCACCCACTCATGCTATGTTAA
AAAGGTATGTACAGTTGGAAAGGTATTTTTGAGGAGAATGCTATAATATA
ATAAAGAATTCGGAAAAAAGAAAATTAAATGAAGAAGAAAATTTTTCTAC
TGGTTTAACATTCACAAAAGAGCACTTTTTAGAATATTTAAACCTTTCTG
ATTCCAAATCTCAATTCAGATTTTTGGTATGATACTTACTTTGGACCAAA
GTTGGGTATAATGGTCAAAACTCATCCGAAATAGCAAAAAAAACCTAGTT
TTTGTGCCATTTTATCAAACCAGTAGAAAATATATTTTCTTTTTACTTTT
ATTTTTCTTCTTCACTGTCAATTTTTCAAGAAATTTTAATCAATGGATTG
TGAATTGATAAGCTGATGAATATTCTTTATATCTTTTTCCCTACTCCAGG
ATTGAAATCAGTGATTGATTCAAAACCTGATTGCAATTTCCACTTGATCG
TTTATGGCACGCCAGCGGAAGAAGGGGGCGGTGGAAAATGTTTGATGATC
GAAAAAGGCGTTTTTGATGAAGCAGATATTTGCATGATGAGTCATCCTGC
GCCATATGAAATTCCGAGCCCTTCTTGGCTTGGTGTTGCCCAATACAGAA
TCGTTTTCAAAGGTAGCATTTTTTTATGGTAATAAATATCTATTTTTTAT
ATAAAACTAAACTTAGGCCTACAGCTTAAGTGCCAATCGTCCATAAATGT
ATTTTTATCCGATTAGTACTAAAATGACGAATAATTTACAATACTAACTA
ATGACTGGGCAATAACATTTGAATTTTTCTGCACGTGTAAATACGTGATA
ATACATTAGAATATCTCATTCTTACGAAGAAAATCTTCCAAATCTATATT
TTTATATTTTACTTATAATTAATGTATTCTTTTCTCTCCTCAGGCAAAAC
AGCACACGCAGCAGCGGCGCCATGGGAAGGAATGAACGCATTAGATGCCG
CTGTAGCATGTTATAATAACGTTAGCATGTTACGACAACAAATGAAACCA
ACTAATCGTATTCATTGCACTATTGTGGATGGAGGAGAAAGACCAAATAT
CATTCCTGAACGCGCCGAAATGTTTTATTTTGTTCGCGCGCAAACTGATA
AAGAAGTCGCGAGTATGGTCGAACGACTCAGAGCGTGCGCTGAAGGAGCA
GCCCAGTCTACAGGTTAGAAATTTCTCTCTTACTTGATGAACCAGCTTTT
GTAGATTTCACTGCTATAATCTGTATGATCAAGCAACTTCCCAGGGGCTA
CTTTGACACAATTGATGTCGGGTATGTGCGTGCCATACGGGTCCTATTTT
TAAACCCTCGAAAGTCTCTCAAAAGGTAGAAGAATCGAGTCTGAAAGGGT
CCCAAACTTACGAAATCTAAAAATTGGAAAAAATAGTCTCTCAAAGGGTT
GCAAAATGTCGAAATTCAGTAGTCTCTCAAATGGTCGATTTTCGAACTTT
GACTCGGACTTACCCGTCACCTCGCAAACCTAGTAGCTCCCCCCGGGGCA
GCTTAAAATGTTGTGTGTTTATGGTCCGTCTTTAGAAGTAGTTATCCTGT
AGACAGATTGAAGTGTTTATGAATTTTCATAGGCTGTACTATGGAGATGT
TTGAATCAAGTCCTTACTTCGCTGCTGTCAATACAAATCAAGTCATGATC
GATCTTTACATCGAAAACGCAAAATCACTTGGCGTTCCTTTTGAAGATGA
TAGCATGAGAGACATATTGCAAGCTTCGACAGATATGGGAAATGTATCAG
CAATGAAACCATCTATACACCCTATATATAAAATAAAATCGGAAGAAACA
AACCATAACCATGGCTTTACAAAAGCCGCTGGATCTGCGGAAAGTCAGTT
ACCCACATTGAATTCAGCAAAGAGTATGGCAATGACCGCTATTGATATCG
TTTGCGAGGAAGGACTTTTAGAAAAGGTTCAGAAAAGCTTCGAAGATTCC
TTACTGTAG Coding sequence (CDS) from alignment at sc0000324_pilon:35206..40364- >XLOC_026642 ID=XLOC_026642|Name=XLOC_026642|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2364bp|location=Sequence derived from alignment at sc0000324_pilon:35206..40364- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAAAATTGAAACAGATCATTTGCGAAGCCATAGACTCCAAGAA
AGATGAATTAAACAACATTAGTCAAGAAATATGGAAAAATCCTGAGTTGA
ATTTCGAAGAATTTAAAGCACATGCCTTGCTGACGTCTTACCTCGAGAAA
GAAGGGTTTGAAGTAGCAAAGAGCACTCCTTTGGAAACTTCATTTATTGC
TCGTTATGGAAAAAAAGAAGGAATAAAAGTTGGAGTGATTTGTGAATATG
ATGCATTACCTGGAGTTGGACATGCTTGCGGTCATAACTTGATCGCTGAA
GCGGGGATCGGAGCAGCATTAGATGAAAGAAAAATTGAAACAGATCATTT
GCGAAGCCATAGACTCCAAGAAAGATGAATTAAACAACATTAGTCAAGAA
ATATGGAAAAATCCTGAGTTGAATTTCGAAGAATTTAAAGCACATGCCTT
GCTGACGTCTTACCTCGAGAAAGAAGGGTTTGAAGTAGCAAAGAGCACTC
CTTTGGAAACTTCATTTATTGCTCGTTATGGAAAAAAAGAAGGAATAAAA
GTTGGAGTGATTTGTGAATATGATGCATTACCTGGAGTTGGACATGCTTG
CGGTCATAACTTGATCGCTGAAGCGGGGATCGGAGCAGCATTAGGATTGA
AATCAGTGATTGATTCAAAACCTGATTGCAATTTCCACTTGATCGTTTAT
GGCACGCCAGCGGAAGAAGGGGGCGGTGGAAAATGTTTGATGATCGAAAA
AGGCGTTTTTGATGAAGCAGATATTTGCATGATGAGTCATCCTGCGCCAT
ATGAAATTCCGAGCCCTTCTTGGCTTGGTGTTGCCCAATACAGAATCGTT
TTCAAAGGATTGAAATCAGTGATTGATTCAAAACCTGATTGCAATTTCCA
CTTGATCGTTTATGGCACGCCAGCGGAAGAAGGGGGCGGTGGAAAATGTT
TGATGATCGAAAAAGGCGTTTTTGATGAAGCAGATATTTGCATGATGAGT
CATCCTGCGCCATATGAAATTCCGAGCCCTTCTTGGCTTGGTGTTGCCCA
ATACAGAATCGTTTTCAAAGGCAAAACAGCACACGCAGCAGCGGCGCCAT
GGGAAGGAATGAACGCATTAGATGCCGCTGTAGCATGTTATAATAACGTT
AGCATGTTACGACAACAAATGAAACCAACTAATCGTATTCATTGCACTAT
TGTGGATGGAGGAGAAAGACCAAATATCATTCCTGAACGCGCCGAAATGT
TTTATTTTGTTCGCGCGCAAACTGATAAAGAAGTCGCGAGTATGGTCGAA
CGACTCAGAGCGTGCGCTGAAGGAGCAGCCCAGTCTACAGGCAAAACAGC
ACACGCAGCAGCGGCGCCATGGGAAGGAATGAACGCATTAGATGCCGCTG
TAGCATGTTATAATAACGTTAGCATGTTACGACAACAAATGAAACCAACT
AATCGTATTCATTGCACTATTGTGGATGGAGGAGAAAGACCAAATATCAT
TCCTGAACGCGCCGAAATGTTTTATTTTGTTCGCGCGCAAACTGATAAAG
AAGTCGCGAGTATGGTCGAACGACTCAGAGCGTGCGCTGAAGGAGCAGCC
CAGTCTACAGGCTGTACTATGGAGATGTTTGAATCAAGTCCTTACTTCGC
TGCTGTCAATACAAATCAAGTCATGATCGATCTTTACATCGAAAACGCAA
AATCACTTGGCGTTCCTTTTGAAGATGATAGCATGAGAGACATATTGCAA
GCTTCGACAGATATGGGAAATGTATCAGCAATGAAACCATCTATACACCC
TATATATAAAATAAAATCGGAAGAAACAAACCATAACCATGGCTTTACAA
AAGCCGCTGGATCTGCGGAAAGTCAGTTACCCACATTGAATTCAGCAAAG
AGTATGGCAATGACCGCTATTGATATCGTTTGCGAGGAAGGACTTTTAGA
AAAGGTTCAGAAAAGCTTCGAAGATTCCTTACTGTAGGCTGTACTATGGA
GATGTTTGAATCAAGTCCTTACTTCGCTGCTGTCAATACAAATCAAGTCA
TGATCGATCTTTACATCGAAAACGCAAAATCACTTGGCGTTCCTTTTGAA
GATGATAGCATGAGAGACATATTGCAAGCTTCGACAGATATGGGAAATGT
ATCAGCAATGAAACCATCTATACACCCTATATATAAAATAAAATCGGAAG
AAACAAACCATAACCATGGCTTTACAAAAGCCGCTGGATCTGCGGAAAGT
CAGTTACCCACATTGAATTCAGCAAAGAGTATGGCAATGACCGCTATTGA
TATCGTTTGCGAGGAAGGACTTTTAGAAAAGGTTCAGAAAAGCTTCGAAG
ATTCCTTACTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000324_pilon | genome | sc0000324_pilon:35206..40364 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 808-1182:376 |
| Aaloc | 538-804:1065 |
| Aaloc | 325-534:1559 |
| Aaloc | 1-321:5160 |
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