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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000360_pilon:185000..190123+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026601.2 ID=XLOC_026601.2|Name=XLOC_026601.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5124bp|location=Sequence derived from alignment at sc0000360_pilon:185000..190123+ (Clytia hemisphaerica_ch_hm2_pilon)
tttgttgaattcaTCAAAAGACCATTGACTATCTGCAGATTATTATGTAT
TGTAAGTGATTTTACCctttttggttgaattttgttctgcatctaaagtc
tgtctcaaaagtaaGCTGACActtaaattttttaacaatttttgcttttt
tgaaaaattatacactGTTAGGAATATGATGtaattactttgaataaacg
ccccgggcgtttattaaattttttgtgtgtttattcgagggggcgtttaa
aagaagggagcGTTTATTGAATAATTTCCATTCAAGATCACCTTTGGAGG
GAATCAATACCCTAATTTGTCTTTATTGATCTTTAAGCCCGAATATCCCt
gtttaaaaacataaaattgtgTCAAAATTACTTTAGTTGTGAAGATGCTA
CAAATTTTAATTAACCAATATGtatctttgattttatttaaacaCTTTCT
TGATGCTTGAAGccacttgtttcaaataaacgcccctcctggagggggcg
tttattgaataATTTCCCTTTtagagggggcgtttaaaagaaaggggcgt
ttattcgaagtaatacggtagaTTAAAATGTTTTATACTATCaagaatca
aaattcaaaaatcatagCATGACACTTATATTTGAACCTCGCTGATTTCA
AATccactttctgatttttcaagtGTCTATATCATCTTTTGTATAATTCC
CTTCGAGAAtatctttcaaactttttaacatAGGGTTCTgagaaattgtt
gaaaaagtaaagtgtccacatacttttgagatagacctaaatatatattt
ttatactTGAAACTGAGAGTAAAACAAATGAATtaatatttcaatgtttt
tctttaattGTCTTTATCACTCTTCAGATAGAGAAAAACGTGACTTTTCA
GAAGCCTGGAGAAGTTATTTCTCCTGGAGGGTTTCTTGGGGTTTATAAGT
AAGTCTACGACTACAGTTGGAGGTGACTCAAAGGTTCCTTATTCGATAGC
TGCCTACCCAATGGTAGCGAAGAGTCGTTAGGTTGCTAAGCCATTTTTGC
CATCCTATTATTACGAAAACTTGCCTGTACAAATTGTGTAAAATTGATTC
TTATCCTGTCTCCCTTTTAGCTTTTCGCTATCGTTGTTTTTGGATGTATC
TCAGCTGGTGGTTATGATGATGCATCAAAGCATTGTGTGTTCAACAGAAA
CAAAAACGCCTGTCAATATGGTGTCGCCATTGGTGTTATCGCATTCCTAG
CGTGTCTACTATTCCTTGCTGTTGATGCACAATTTGACAGCATTAGTAAC
ACAGTCAACAGACGTCACCTGGTGACTGCGGATCTTGGATTTTCAGCTTT
CTGGACATTTCTTTGGTTCGTTGGCTTTTGTTTCTTGGCTGACCAGTGGC
GTAAAAGTCCAATGCAATCTCAAAATGTGACAAACCATGCTAGAGCAGCC
ATTGCATTCTCCTTCTTCTCTATATTCACATGGGTGAGGATTGATTGAGG
tttttttttCGAAGGGAATTGTACTGTAGTCACAAATAGTTAAACACTTG
TACTGAGGTTATTGTCAAAAAagagtctcttattttgctctaaaagactA
ATATTTAGTCTATGATTGCTttaattttgggtatttaaAAGTACAATTTT
CAACTCTCGGTAATTGGCCCTATCCCCAAATGATTAAAATCTAAAGATTT
CCCCAATCCTccccctcccccgtttattcagCACCTAAGAGTAGTTTCTT
CTAATTCCTTTATTCAGTGTGTGAGATTCTATTCGAAAATAatgttttaa
acatttttggacctaccccggtgggttggaggtcctataaattcacctct
gtccgtccgtccgtccgttcgttaccagcttttctcgagattgaatcata
ggaatcatttgatttttggtacaaaggtgcaaaacggtggtggccaaaat
gtgacggagcccgattttcgaaaacaaattttttttgggcaaatttgggc
caaaaaacggctaaaaaacgggttttttggactttgtgaaaaattggatc
attaattttttctgattttttgcatgaaagtagggtaccatcataggtaa
aagatggctcaagcagatttttgtaaaaaaatttatttggcttaaaaaac
gcatgtttatctataagaatcactattaataagcatacatcaatgttctt
agtcaaattactcaatttttttatgagatagatgttttttttgctcatga
gggcttatttttgaagcatatgtgtgtttagacatgaaattttggttgct
tggcgtgtttttatagaaaaactggccaaattcgatatttttttataagc
acattatcaattacttaggtattagcttttctcgagattggctctttcat
tctttatgattttttgcacaaagatgcataactataaaccctcgaatgtg
actgagcccgattttcgaatttttgggcaaatttgggccaaaaaacggct
aaaaaaagggttttttggacattgtgaaatattggatcgttgtttttttc
tgattttttgcatgaaagtaggtaaaagatgggtcaagcagatttttgta
aaaaaatttatttggcttaaaaaacgcatgtttatctataagaatcacta
ttaataagcatacatcaatgttcttagtcaaattactcaatttttttaat
gagatagatgttttttttgctcatgagggcttatttttgaagcatatgtg
tgtttagacatgaaattttggttgcttggcgtgtttttatagaaaaactg
gccaaattcgatatttttttataagcacattatcaattacttaggtatta
gcttttctcgagattggctctttcattctttatgattttttgcacaaaga
tgcataactataaaccctcgaatgtgactgagcccgattttcgaattttt
gggcaaatttgggccaaaaaacggctaaaaaaagggttttttggacattg
tgaaatattggatcgttgtttttttctgattttttgcatgaaagtaggta
aaagatgggtcaagcagatttttgtaaaaaaacttttcagctcaaaaaac
gcatctttatctataagaatcactattaataagcatacatcaatgttctt
agcatggctcgcacccccccccccccgggagctacacctaaaatttgcta
tataagaggtgggagctgcttgtttttcctgacaggcggggggagctcta
tcttggggggggacctgcattagtttatgtaattctgggggctaaataac
acttcctaaatatttttctttactgttggtttttagtttctctaaacctt
tatgttttgTGAACCCTTTAAGTgtcaatgtcgtatatatcagccATGGG
CTATgttatgtaggagggcgaagccaaatttggccctgagaaacttgatt
ctgtcctccagccaattagtttgaagttttaccacttggcaggcgcctaa
aagaaagagaatctaagctatccaacggtctataaacgagcttctaactc
cttctagatctggagatataagcctttaaagtttgaactagctattttct
ttaaaaaacttagcaaaaaaatgaccgtggcactaaaagggttaaaatgc
aaaaaatgaagacattctattgcattctctaaaagtgcacacacatgtaa
aaagagctttgtgaatgccataaaatttttcccctatactgggacctaaa
attttatcaggctggggggaccttgttctcaggggggacctaaatttggc
ggggggacctagaaccccagtcggagccatgcttagccaaattactcaat
tttttgatgagatagatgtctttttatgctcacgaagtcttgaatataaa
agaatatttcaagagcatgaaattttggtttctaaacgtttttttataag
aaacaaacgaccgATTTtcgtaaaaagttttttttccggccgaaaatgcc
ggaaatatgccggaaaatccagttttttgacattttctcgaattttcatc
tttagttttttctgatttattttagaAAGATGCGTTTCCGCAatgttcaa
aacatggccgagttcgatttttgagaatttttttttccgtttgaaaatgc
cggaaatcgcagtttttacagattttcattggactttttccttatatttc
tatgtttttcacacaaaaacattattgatagcaatactcaccatcaagca
tgattcaatacacctttcccgtaattcaaagttctcagaaatggcctggg
aaaatgtgcgctccaccgttgtgtgtaaaattgtttgggaggtaaaaaac
gcgtttttgcctgcgaggggttagggaaagtgggatttCAGCatctaact
tttgacagcgatCTTTTtgtggcaaaatattttcagggtggtataatatc
atgaatagattgaacatactaaaatttgagggaattttgttcgacagaac
ttaagaaaagctcaaaaaaccaactttccctaagggaacgtagacaaaaa
cgggtttttttaactccagagaccaaacggtagagagcatcaaaataatg
cgcgcgcattagttttacgaattacgggaaaggtgtattgtcaataaaac
tgatttttgcgaccagaactttctatttattttttccccacaacccttcc
ctctcctcgcaatgatgaatttattgcgtcatgcattttcgctaaacgat
aaaattttctggctgattttttcatttttctcctcgcattgctatctaac
ctTCATCATttggtaggtccattcagcatctagcttgttattttctattt
ttctcagATTGCACTATCACTCATGGCATACCAACGTTACCGCCAAGGCG
ATGGATTCGAACGCACACATCAACAACCTGCATCGGGCGGTGATTACAAC
ACTGCCAACCAGGGTGGATACAATAAGTCACCCTATGCCTCATTCCCACA
CCCTGGCGAAGATGAGTCCGCCCAACAGTCGTATCAGTCACAGCCATTTG
GTGTACCCGAGCAACCGTTTGGGGTACCACCTTCGCAACCTGTGAAAACT
GAATATAGTGTTCCCGAATACTGA Coding sequence (CDS) from alignment at sc0000360_pilon:185000..190123+ >XLOC_026601.2 ID=XLOC_026601.2|Name=XLOC_026601.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000360_pilon:185000..190123+ (Clytia hemisphaerica_ch_hm2_pilon)
tttgttgaattcaTCAAAAGACCATTGACTATCTGCAGATTATTATGTAT
TtttgttgaattcaTCAAAAGACCATTGACTATCTGCAGATTATTATGTA
TTCTTTTCGCTATCGTTGTTTTTGGATGTATCTCAGCTGGTGGTTATGAT
GATGCATCAAAGCATTGTGTGTTCAACAGAAACAAAAACGCCTGTCAATA
TGGTGTCGCCATTGGTGTTATCGCATTCCTAGCGTGTCTACTATTCCTTG
CTGTTGATGCACAATTTGACAGCATTAGTAACACAGTCAACAGACGTCAC
CTGGTGACTGCGGATCTTGGATTTTCAGCTTTCTGGACATTTCTTTGGTT
CGTTGGCTTTTGTTTCTTGGCTGACCAGTGGCGTAAAAGTCCAATGCAAT
CTCAAAATGTGACAAACCATGCTAGAGCAGCCATTGCATTCTCCTTCTTC
TCTATATTCACATGGCTTTTCGCTATCGTTGTTTTTGGATGTATCTCAGC
TGGTGGTTATGATGATGCATCAAAGCATTGTGTGTTCAACAGAAACAAAA
ACGCCTGTCAATATGGTGTCGCCATTGGTGTTATCGCATTCCTAGCGTGT
CTACTATTCCTTGCTGTTGATGCACAATTTGACAGCATTAGTAACACAGT
CAACAGACGTCACCTGGTGACTGCGGATCTTGGATTTTCAGCTTTCTGGA
CATTTCTTTGGTTCGTTGGCTTTTGTTTCTTGGCTGACCAGTGGCGTAAA
AGTCCAATGCAATCTCAAAATGTGACAAACCATGCTAGAGCAGCCATTGC
ATTCTCCTTCTTCTCTATATTCACATGGATTGCACTATCACTCATGGCAT
ACCAACGTTACCGCCAAGGCGATGGATTCGAACGCACACATCAACAACCT
GCATCGGGCGGTGATTACAACACTGCCAACCAGGGTGGATACAATAAGTC
ACCCTATGCCTCATTCCCACACCCTGGCGAAGATGAGTCCGCCCAACAGT
CGTATCAGTCACAGCCATTTGGTGTACCCGAGCAACCGTTTGGGGTACCA
CCTTCGCAACCTGTGAAAACTGAATATAGTGTTCCCGAATACTGAATTGC
ACTATCACTCATGGCATACCAACGTTACCGCCAAGGCGATGGATTCGAAC
GCACACATCAACAACCTGCATCGGGCGGTGATTACAACACTGCCAACCAG
GGTGGATACAATAAGTCACCCTATGCCTCATTCCCACACCCTGGCGAAGA
TGAGTCCGCCCAACAGTCGTATCAGTCACAGCCATTTGGTGTACCCGAGC
AACCGTTTGGGGTACCACCTTCGCAACCTGTGAAAACTGAATATAGTGTT
CCCGAATACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000360_pilon | genome | sc0000360_pilon:185000..190123 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 415-681:4858 |
| Aaloc | 52-414:1121 |
| Aaloc | 1-51:1 |
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