XLOC_026564 (mRNA) -

Overview
NameXLOC_026564
Unique NameXLOC_026564
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000107_pilon:370814..371901-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026564 ID=XLOC_026564|Name=XLOC_026564|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1088bp|location=Sequence derived from alignment at sc0000107_pilon:370814..371901- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCTTAACAAAAAAGAGAACTATCATTGTGTAGTTCTCCATTTGAGTGG GACAAAAAGGGTGGCTGTCGACAGCTACGCGACACCTGGCTTTGCGCACG ACTTTATGACAGGGCTCAGCGTGGAGTCAAGTAAGTTTGGAGATGTCATC AAGGACACATTCAAAACGGCGTATAAACGTAAATAGTTTTACCCTACATC CACTTATTATATGCTTTGGGGTTTTTGATAAGGAGTTTACTAGTTTATGC TTTATAGAGAACTTCTAGTGAGATTTTGACCTGGGGCCAGTCTGTTTCTA GGATCAGTGATCGTTTAATGGGGGAGTCCGCTTTAGACCATGCTTGATTT ACCTTTGATGTCATTTATTTTAGAATTCTTAAAGAAACAAGAACAATCGG AAGCAGAAAATGCAGACCCTCCTGAAGGTAAAGCAATAAAACATTTTTAT GCACAATAAGTTTAACAAAGTTTTTAACTACACTGTCAATTGTATAAAAA AAACAAAGCTCAGAAATGAGAAAACTTTAAATAAAAATAAGGATATAATT GGCATCAGTTGGCTTGCAAAATCTAAATTTTTGTCAACCAGTAGTTGAAG GTACACTCCTTATTAACTTTTTTAGAATCTGATACATCACTTGATAATAA CTTAAAATGATGATAACTTTTACATTTATGAAGGTTTTTTTTCTGTCTTT AACTAAAAAATCATTTTTTTAAATATTTTATGATTTTTGTAGGTTCAACA TTTTCCGAAAATTACGAGGCACCAGAAAAGTTACAAACTCCAAAGCCAGC TGCTCCCGAATCAACAGTAACTGTTGAATCAACAGTTGAAGGTATTCCTT AAAGCTTTTTCAGGATCTGTTACTAATAATTCAAATTCAAAATAAATTCA AGTACTTCTGCATTTTATGAATTAGGTTTTCGTTAAACATAATTTGCATG AATTAAAGTTTTTCAGGAAAAAATTTCTGTCGAAAAAGAATAATTTTTCT ATCATATTTTATAATTTTTGTAGGTTCAACAATTTCCGACAATCACCAGC TTTCAGAAAATTTACAAGCTCTAAATCCAGTTGCACCT

Coding sequence (CDS) from alignment at sc0000107_pilon:370814..371901-

>XLOC_026564 ID=XLOC_026564|Name=XLOC_026564|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=792bp|location=Sequence derived from alignment at sc0000107_pilon:370814..371901- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCTTAACAAAAAAGAGAACTATCATTGTGTAGTTCTCCATTTGAGTGG
GACAAAAAGGGTGGCTGTCGACAGCTACGCGACACCTGGCTTTGCGCACG
ACTTTATGACAGGGCTCAGCGTGGAGTCAAGTAAGTTTGGAGATGTCATC
AAGGACACATTCAAAACGGCGTATAAACATTCTTAACAAAAAAGAGAACT
ATCATTGTGTAGTTCTCCATTTGAGTGGGACAAAAAGGGTGGCTGTCGAC
AGCTACGCGACACCTGGCTTTGCGCACGACTTTATGACAGGGCTCAGCGT
GGAGTCAAGTAAGTTTGGAGATGTCATCAAGGACACATTCAAAACGGCGT
ATAAACAATTCTTAAAGAAACAAGAACAATCGGAAGCAGAAAATGCAGAC
CCTCCTGAAGAATTCTTAAAGAAACAAGAACAATCGGAAGCAGAAAATGC
AGACCCTCCTGAAGGTTCAACATTTTCCGAAAATTACGAGGCACCAGAAA
AGTTACAAACTCCAAAGCCAGCTGCTCCCGAATCAACAGTAACTGTTGAA
TCAACAGTTGAAGGTTCAACATTTTCCGAAAATTACGAGGCACCAGAAAA
GTTACAAACTCCAAAGCCAGCTGCTCCCGAATCAACAGTAACTGTTGAAT
CAACAGTTGAAGGTTCAACAATTTCCGACAATCACCAGCTTTCAGAAAAT
TTACAAGCTCTAAATCCAGTTGCACCTGTTCAACAATTTCCGACAATCAC
CAGCTTTCAGAAAATTTACAAGCTCTAAATCCAGTTGCACCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_026564XLOC_026564-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107_pilongenomesc0000107_pilon:370814..371901 -
Properties
Property NameValue
Aaloc334-396:64
Aaloc235-330:345
Aaloc181-231:714
Aaloc1-177:1089