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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:252964..256473+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026531 ID=XLOC_026531|Name=XLOC_026531|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3510bp|location=Sequence derived from alignment at sc0000256_pilon:252964..256473+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCAGTAAGAGATAACGCGTTATATATCAATACACTTACTGCAGA
TGACATTAGAAATTTGGTTAAGTTTTTTAATACTCTAAAACTCAATGATG
AATCCGATATAGTGTTCAAGGTTTATCAATCTCAACCGAGAAAAGCAAAA
GTTAAAGAATTAGATACAGAAAAAGTTTCAACGTCTGATGAAGAACTAGA
TTTATTACGTCAATTGAAACTCGGGGAATCCTATAGTAGAAGAAACTTTA
TCAAACCTTCACAATGGGATTTTCCAATTCAGCAATATTCTTTACTTCAT
CAATCTGAACCCCAGCAGTACTTGCTCAATAAGTATGGATCTACAATACA
CATTGTTGAGATTAAGGCTGAAGACTATGGTTTTAATATCATTGGTGTTT
CTTTGTTTGTATTGTTTGTTCGAACCAATGTGGATTATCAAGTTGTTGGG
ACAATACTTTGCAATCGATACAATAATCACACGAAAGTTTTGAAAGAAGC
TTTGACAGAGTTTAAAGAAATCAATGAGTTTTggaaaccaaaatatctca
tgATTGATCCCTCTGAGTCGATGGTTGCTGCTGTCAAGGATGTATTTCCA
GGTAAACTTCTATTTATTTCCATACTACCCGTAAAATTTGTTCctcttca
aataaaaatgtGAGAAATGTTTTGACTGTTTCTTCAAAAGTTTAGTTCAA
GTTACTTCGTTCTGATGTTTTTTGTTAGATTTTGGAGAGTCCAATTAACG
ACACCTCATTTAACAGTCATACAAAGTGAGGTTTATTTCGTAATCCAGTT
GAAGAAGGAGTGTCCCGAGAGTAAAAATTATCTTGAAATTTCCAGGCGGT
AAAAGACTGGTTTAAGTTCGTCAACCCTCACTTTAAAGAATTTTCCAAGG
CTGTCTTTGCAAGTTTTGCCAGTTTTGCCAGGGAGTTATTCATACATTTC
CGAGTACTTCTTTGAATTAAAAAGGTTCTTCCACCCCCTGTATAGAtttt
tttAATGGGACAGTCCATTGAATGTCGTGtaattttcttttgtcttcAGG
ATCTGAGttctttttcaacaaagaatCTTGCATACGAGAATGGCAAACAT
ATTTGACAGATCCTTCAAACGGTGTGAAAGATCATTCCGATAAGATTCTT
GGTCATTTGAAAGCACTACAGATGGCAGAATCGATTGATGAAGTTGACCG
TTTGATGGACAACATCCCACCTGAAGAAGATTGGTTGAAATCTGTCGAGT
TTTCTGGAGATGGCTTCTGGATATCACAATACGAGGTATCGTGAAATTTG
TTTATGAAATACCATTTTTAAGGTGTTCAAGTTACTAATATAGTGGAATC
TCTTTAACTCCGACCTCTagaactcgaatgtctccttagctcgaacaagt
tttatggtcacttcagttaacaatgctttataaaccttactccataactc
gaaattcgAACAGATTTGAGTTCCTCATGTTTGTTTTACTACATTCCAAC
GGACATCTATCAATCCAgtctattttctcaaattttagccATTGTCGGGA
AATTTAGTCCTCGCCTAAACCTCTATGAAAATAAGAGAAATTTGTTGTGA
AAGGGACCGATTCGCAAATTCGCGAACATTTTATAAATTCAATACACCaa
aaaaaTCCaagcgaaaatttatccacctTTAAAGGTTTGTTCTTTTTTCT
AGCGCAACCGATAAAATGATAAAGAATGATAATTATCACCAGAGTTTTGT
TATCTATTGCTTTCAGAAATGGATGAAATGTTGCTTACCAAAGGATTTGA
TATTCTTTCTACGAGACGACTGGCTTCGCTCTGCTGTTCACTTTTATAGA
AACATCCTCGAATCCTACTCAAAGAAGGACACCAAAGGGTTGATGATGTT
GATGGCGAAATTAACGGACGAGAAACCAAAGTCTCGCTACTCGGACAGGT
ATCCTTGTTcctaataaaagaaacaattCTTCAGCTATTTCACCACTTTG
AATCAGAAATTTAATATCGTTTATCTATGACCTTTCAAATAGATTGCTCT
CTTCTCAAAAAAGGAATGAAGTTCTTCtaaaaattaacaatttttgataa
ttcCGTTGAAAACAGCCAAAATTCACAGGAGCTATGCACCCAGACTTTAG
TGGTTTAAAGTACATCTTGTCTAtctattttcattatttctcaTCGGAAT
AAAGCAGTTTGGCCTCTGAATGATAATGACAGTTCGTTTCAAACTAATAT
TGACATAACTGTCATCAGGGGTAAAAATTTCTAATCAGGGAAATAGTATT
GAGCCTTTTTTAGGAGTTTAGAAGTTGTCGTAAAGAATCtcgtttattca
atttttttagttaTGTCTTGAAGAATGAAATGTTGTTCAAAGATGCCATG
AGTGCAGCAACTCGCTATTCGTCATTCGaaaaaaaCTTTGGTCTACCATC
ATTCATGATGTCTCATTGCGCAAGCATAATGGACAATTCccaaacaacaa
aatcaaacaatacCGGACATACAGTTACCCTGGGAAACCAAAGAACTTTC
CCATCATGCAATtgtgaaaattggaaatttaaCAGAATGCCTTGCGCTCA
TTTTCTGAGAATCTTCAAAGAAACAAATGCTCGGTATTCTTCCTTAAGTC
CATTGTATCGTGCAAGTCCTTGTTTTCAAATCGATTTATCACGTGTTCGG
AATAAATCAAAAAGCTTATCAAAAGGCAATATTCTTCCATCggaaattgt
ttcatcaaattcAACTGCAGAAATATTTGCATTGAAAGACCCTCCGATTG
ATTTCCAAAATGAATCGAAACAGTTACATGAGAATGAAGTAAGGGAGGAC
GTTCATTCTTCGAGTAACGAGAAATCATCCGCTCATCATCAGGTGCCACA
CGTACAATCAAAGAGAAAAGACGAAACAATACTTTCTCATAAAACGCAAC
TTAAAATGTTGCCAAATACGGCTTCCAAGTTTCCTAGTTTGACTCCAATT
ATTGGCGCAAAGATATCACCTGTGACTCCAATTTTTGGCGCAAGCATTTC
AGATAAGAATAAAGCTTCACAACAAATTGAAAAGTTGAATAGCATACCAT
CTGAGAATGAGAAGATTCGTACTTGGCTTCAAGAACAAAAACTAAGGAAA
AAAGATGATAGTTCAAAAACGACAGGAACTTCAAACCGTTTACAAAATAA
GAACTCCAAGCAAACATCAACTTTAAGCCAACCTGAAAATCCTACTAAGC
GTAAAACAAATTGCGAAATTATTGGTGAAAAACGCAAATTACTTTCTAAC
acgaaatttcatgtttctacaACCACAAAGAAATCGAAGCGGctatcaca
aaaaatgaaacacaaaaaaacttcACTACAAACTGAGAAACAAACTTCTA
ATACTACTGAGCAAGAAGGGACATGTTCAAATGCAACAAAATTACAACCT
AAAACGTACCAGTATGCATCTTATGTAGAACCATCAAAACAATCAGCTTC
TTCATCAGTG Coding sequence (CDS) from alignment at sc0000256_pilon:252964..256473+ >XLOC_026531 ID=XLOC_026531|Name=XLOC_026531|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4338bp|location=Sequence derived from alignment at sc0000256_pilon:252964..256473+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCAGTAAGAGATAACGCGTTATATATCAATACACTTACTGCAGA
TGACATTAGAAATTTGGTTAAGTTTTTTAATACTCTAAAACTCAATGATG
AATCCGATATAGTGTTCAAGGTTTATCAATCTCAACCGAGAAAAGCAAAA
GTTAAAGAATTAGATACAGAAAAAGTTTCAACGTCTGATGAAGAACTAGA
TTTATTACGTCAATTGAAACTCGGGGAATCCTATAGTAGAAGAAACTTTA
TCAAACCTTCACAATGGGATTTTCCAATTCAGCAATATTCTTTACTTCAT
CAATCTGAACCCCAGCAGTACTTGCTCAATAAGTATGGATCTACAATACA
CATTGTTGAGATTAAGGCTGAAGACTATGGTTTTAATATCATTGGTGTTT
CTTTGTTTGTATTGTTTGTTCGAACCAATGTGGATTATCAAGTTGTTGGG
ACAATACTTTGCAATCGATACAATAATCACACGAAAGTTTTGAAAGAAGC
TTTGACAGAGTTTAAAGAAATCAATGAGTTTTggaaaccaaaatatctca
tgATTGATCCCTCTGAGTCGATGGTTGCTGCTGTCAAGGATGTATTTCCA
GATGAAAGCAGTAAGAGATAACGCGTTATATATCAATACACTTACTGCAG
ATGACATTAGAAATTTGGTTAAGTTTTTTAATACTCTAAAACTCAATGAT
GAATCCGATATAGTGTTCAAGGTTTATCAATCTCAACCGAGAAAAGCAAA
AGTTAAAGAATTAGATACAGAAAAAGTTTCAACGTCTGATGAAGAACTAG
ATTTATTACGTCAATTGAAACTCGGGGAATCCTATAGTAGAAGAAACTTT
ATCAAACCTTCACAATGGGATTTTCCAATTCAGCAATATTCTTTACTTCA
TCAATCTGAACCCCAGCAGTACTTGCTCAATAAGTATGGATCTACAATAC
ACATTGTTGAGATTAAGGCTGAAGACTATGGTTTTAATATCATTGGTGTT
TCTTTGTTTGTATTGTTTGTTCGAACCAATGTGGATTATCAAGTTGTTGG
GACAATACTTTGCAATCGATACAATAATCACACGAAAGTTTTGAAAGAAG
CTTTGACAGAGTTTAAAGAAATCAATGAGTTTTggaaaccaaaatatctc
atgATTGATCCCTCTGAGTCGATGGTTGCTGCTGTCAAGGATGTATTTCC
AGGATCTGAGttctttttcaacaaagaatCTTGCATACGAGAATGGCAAA
CATATTTGACAGATCCTTCAAACGGTGTGAAAGATCATTCCGATAAGATT
CTTGGTCATTTGAAAGCACTACAGATGGCAGAATCGATTGATGAAGTTGA
CCGTTTGATGGACAACATCCCACCTGAAGAAGATTGGTTGAAATCTGTCG
AGTTTTCTGGAGATGGCTTCTGGATATCACAATACGAGGATCTGAGttct
ttttcaacaaagaatCTTGCATACGAGAATGGCAAACATATTTGACAGAT
CCTTCAAACGGTGTGAAAGATCATTCCGATAAGATTCTTGGTCATTTGAA
AGCACTACAGATGGCAGAATCGATTGATGAAGTTGACCGTTTGATGGACA
ACATCCCACCTGAAGAAGATTGGTTGAAATCTGTCGAGTTTTCTGGAGAT
GGCTTCTGGATATCACAATACGAGAAATGGATGAAATGTTGCTTACCAAA
GGATTTGATATTCTTTCTACGAGACGACTGGCTTCGCTCTGCTGTTCACT
TTTATAGAAACATCCTCGAATCCTACTCAAAGAAGGACACCAAAGGGTTG
ATGATGTTGATGGCGAAATTAACGGACGAGAAACCAAAGTCTCGCTACTC
GGACAGAAATGGATGAAATGTTGCTTACCAAAGGATTTGATATTCTTTCT
ACGAGACGACTGGCTTCGCTCTGCTGTTCACTTTTATAGAAACATCCTCG
AATCCTACTCAAAGAAGGACACCAAAGGGTTGATGATGTTGATGGCGAAA
TTAACGGACGAGAAACCAAAGTCTCGCTACTCGGACAGttaTGTCTTGAA
GAATGAAATGTTGTTCAAAGATGCCATGAGTGCAGCAACTCGCTATTCGT
CATTCGaaaaaaaCTTTGGTCTACCATCATTCATGATGTCTCATTGCGCA
AGCATAATGGACAATTCccaaacaacaaaatcaaacaatacCGGACATAC
AGTTACCCTGGGAAACCAAAGAACTTTCCCATCATGCAATtgtgaaaatt
ggaaatttaaCAGAATGCCTTGCGCTCATTTTCTGAGAATCTTCAAAGAA
ACAAATGCTCGGTATTCTTCCTTAAGTCCATTGTATCGTGCAAGTCCTTG
TTTTCAAATCGATTTATCACGTGTTCGGAATAAATCAAAAAGCTTATCAA
AAGGCAATATTCTTCCATCggaaattgtttcatcaaattcAACTGCAGAA
ATATTTGCATTGAAAGACCCTCCGATTGATTTCCAAAATGAATCGAAACA
GTTACATGAGAATGAAGTAAGGGAGGACGTTCATTCTTCGAGTAACGAGA
AATCATCCGCTCATCATCAGGTGCCACACGTACAATCAAAGAGAAAAGAC
GAAACAATACTTTCTCATAAAACGCAACTTAAAATGTTGCCAAATACGGC
TTCCAAGTTTCCTAGTTTGACTCCAATTATTGGCGCAAAGATATCACCTG
TGACTCCAATTTTTGGCGCAAGCATTTCAGATAAGAATAAAGCTTCACAA
CAAATTGAAAAGTTGAATAGCATACCATCTGAGAATGAGAAGATTCGTAC
TTGGCTTCAAGAACAAAAACTAAGGAAAAAAGATGATAGTTCAAAAACGA
CAGGAACTTCAAACCGTTTACAAAATAAGAACTCCAAGCAAACATCAACT
TTAAGCCAACCTGAAAATCCTACTAAGCGTAAAACAAATTGCGAAATTAT
TGGTGAAAAACGCAAATTACTTTCTAACacgaaatttcatgtttctacaA
CCACAAAGAAATCGAAGCGGctatcacaaaaaatgaaacacaaaaaaact
tcACTACAAACTGAGAAACAAACTTCTAATACTACTGAGCAAGAAGGGAC
ATGTTCAAATGCAACAAAATTACAACCTAAAACGTACCAGTATGCATCTT
ATGTAGAACCATCAAAACAATCAGCTTCTTCATCAGTGttaTGTCTTGAA
GAATGAAATGTTGTTCAAAGATGCCATGAGTGCAGCAACTCGCTATTCGT
CATTCGaaaaaaaCTTTGGTCTACCATCATTCATGATGTCTCATTGCGCA
AGCATAATGGACAATTCccaaacaacaaaatcaaacaatacCGGACATAC
AGTTACCCTGGGAAACCAAAGAACTTTCCCATCATGCAATtgtgaaaatt
ggaaatttaaCAGAATGCCTTGCGCTCATTTTCTGAGAATCTTCAAAGAA
ACAAATGCTCGGTATTCTTCCTTAAGTCCATTGTATCGTGCAAGTCCTTG
TTTTCAAATCGATTTATCACGTGTTCGGAATAAATCAAAAAGCTTATCAA
AAGGCAATATTCTTCCATCggaaattgtttcatcaaattcAACTGCAGAA
ATATTTGCATTGAAAGACCCTCCGATTGATTTCCAAAATGAATCGAAACA
GTTACATGAGAATGAAGTAAGGGAGGACGTTCATTCTTCGAGTAACGAGA
AATCATCCGCTCATCATCAGGTGCCACACGTACAATCAAAGAGAAAAGAC
GAAACAATACTTTCTCATAAAACGCAACTTAAAATGTTGCCAAATACGGC
TTCCAAGTTTCCTAGTTTGACTCCAATTATTGGCGCAAAGATATCACCTG
TGACTCCAATTTTTGGCGCAAGCATTTCAGATAAGAATAAAGCTTCACAA
CAAATTGAAAAGTTGAATAGCATACCATCTGAGAATGAGAAGATTCGTAC
TTGGCTTCAAGAACAAAAACTAAGGAAAAAAGATGATAGTTCAAAAACGA
CAGGAACTTCAAACCGTTTACAAAATAAGAACTCCAAGCAAACATCAACT
TTAAGCCAACCTGAAAATCCTACTAAGCGTAAAACAAATTGCGAAATTAT
TGGTGAAAAACGCAAATTACTTTCTAACacgaaatttcatgtttctacaA
CCACAAAGAAATCGAAGCGGctatcacaaaaaatgaaacacaaaaaaact
tcACTACAAACTGAGAAACAAACTTCTAATACTACTGAGCAAGAAGGGAC
ATGTTCAAATGCAACAAAATTACAACCTAAAACGTACCAGTATGCATCTT
ATGTAGAACCATCAAAACAATCAGCTTCTTCATCAGTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:252964..256473 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2101-2166:3445 |
| Aaloc | 1021-2100:2362 |
| Aaloc | 838-1017:1767 |
| Aaloc | 604-837:1052 |
| Aaloc | 1-600:1 |
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