XLOC_026500 (mRNA) -

Overview
NameXLOC_026500
Unique NameXLOC_026500
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:4414921..4415460-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026500 ID=XLOC_026500|Name=XLOC_026500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=540bp|location=Sequence derived from alignment at sc0000001_pilon:4414921..4415460- (Clytia hemisphaerica_ch_hm2_pilon)
TGGAAGCCACCTCCCGACATTACAAACAATCTCCGCACCTGCTTCACTCA AATGCACCTCCCCCTTTTGCCATCAAAGTACTACTCGAACACGTCTTGAA ACACAGCAATTTCCGGTTTTTGAATTCCCACTACATACAAAACAATGGTA CCAGCATGGGAGGACGATACGCACCCCAATATGCAAATTTATTCATGGCT GATGTTGAAGCAGCAATACTCATGGAGTTCCAACAATACATCCCACTCTG GAAACGTTTTATTGATGATGTATTTTTTCTTTTCATTGGGTCAGATGAAG ACTTAAACCGTCTCAAACAATTCATGAACATAATCCATGACACAATAAAA TTTACATTTGAACATTCCAAAGAAAGAATCAACTTCCTAGACCTCTCAAT CTCTATCTCTAACCATCAGTTCCACACTTCTATATACAGAAAACCCACGG ACCGCTCCCAATTCCTTCACTTTCAATCAAATCACCCCCTACATGTCAAA GAAGGAATCATATACTCACAAGGACTACGATACAACCTCA

Coding sequence (CDS) from alignment at sc0000001_pilon:4414921..4415460-

>XLOC_026500 ID=XLOC_026500|Name=XLOC_026500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000001_pilon:4414921..4415460- (Clytia hemisphaerica_ch_hm2_pilon)
TGGAAGCCACCTCCCGACATTACAAACAATCTCCGCACCTGCTTCACTCA
AATGCACCTCCCCCTTTTGCCATCAAAGTACTACTCGAACACGTCTTGAA
ACACAGCAATTTCCGGTTTTTGAATTCCCACTACATACAAAACAATGGTA
CCAGCATGGGAGGACGATACGCACCCCAATATGCAAATTTATTCATGGCT
GATGTTGAAGCAGCAATACTCATGGAGTTCCAACAATACATCCCACTCTG
GAAACGTTTTATTGATGATGTATTTTTTCTTTTCATTGGGTCAGATGAAG
ACTTAAACCGTCTCAAACAATTCATGAACATAATCCATGACACAATAAAA
TTTACATTTGAACATTCCAAAGAAAGAATCAACTTCCTAGACCTCTCAAT
CTCTATCTCTAACCATCAGTTCCACACTTCTATATACAGAAAACCCACGG
ACCGCTCCCAATTCCTTCACTTTCAATCAAATCACCCCCTACATGTCAAA
GAAGGAATCATATACTCACAAGGACTACGATACAACCTCATGGAAGCCAC
CTCCCGACATTACAAACAATCTCCGCACCTGCTTCACTCAAATGCACCTC
CCCCTTTTGCCATCAAAGTACTACTCGAACACGTCTTGAAACACAGCAAT
TTCCGGTTTTTGAATTCCCACTACATACAAAACAATGGTACCAGCATGGG
AGGACGATACGCACCCCAATATGCAAATTTATTCATGGCTGATGTTGAAG
CAGCAATACTCATGGAGTTCCAACAATACATCCCACTCTGGAAACGTTTT
ATTGATGATGTATTTTTTCTTTTCATTGGGTCAGATGAAGACTTAAACCG
TCTCAAACAATTCATGAACATAATCCATGACACAATAAAATTTACATTTG
AACATTCCAAAGAAAGAATCAACTTCCTAGACCTCTCAATCTCTATCTCT
AACCATCAGTTCCACACTTCTATATACAGAAAACCCACGGACCGCTCCCA
ATTCCTTCACTTTCAATCAAATCACCCCCTACATGTCAAAGAAGGAATCA
TATACTCACAAGGACTACGATACAACCTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_026500XLOC_026500-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:4414921..4415460 -
Properties
Property NameValue
Aaloc469-537:70
Aaloc55-468:485
Aaloc1-54:541