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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:1711472..1716971+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026470 ID=XLOC_026470|Name=XLOC_026470|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5500bp|location=Sequence derived from alignment at sc0000001_pilon:1711472..1716971+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAAATCAATATGTGCATATCAAAGCAATAATGATGGTGTATTATC
TTTTCCCATTGGGAAAGTCTTCAATTTGATTGAACAGTTGGATGAACATT
GGTGGTCCATGCAAGATGAGTTTGGAAATAGTGGACTTATACCAGCATCT
TATCTTGAAGTTAACAAGGTCTGAAAAATGAATATTGGATTTTTTAtccc
aatttcaaatttttagtttaaatgATTATCTTCTCATTGGTTAACAATGT
TGCAACCTTTACAAGGTTTTGTATACTTTccaagggaactaattttcgct
ggAACTAGTACTTCAGTGGAATTTACTTTTTGTGGTGCAAAGGGTACTTT
ACTACCCATTTTTTGCCGAAGTTCCTTCATAATTTTGAGTTATTTGAGTA
TATATTGATAAAAATCGCATTTtgcagaactaattttcgcagtagacacc
caaaaacgcgaaattagatcacacaaaaaatttcctttaaGTTAATTTTT
ACAGTAAACTTACACCGTGTGTAACATTCAAACTTCTGCAAACAATTTAT
TGCAACAACCATGTTTTATATTTGATGACTATAATAACAATATGAATATT
AtcagtaatattttttttacaaattatatCAGTGtttttttACTTCACTG
ATTTTTAGATCACTAAAAATGATGTTTTGAAATCAATCAAGAAATCAGTA
GACTGTATCAAAACAATTGCGCAAAGTCATCATCGGAAATTAAATGAAAC
GGAACGAAGAAATGTagtgtaagattttttttttaaagcttcaTTAAAAA
ACGTAATCTATTATATTTCCTTTTATAGGTTAGAAAACCATGACACAATT
GACAAACAAAACCCACtttattttaaaacacaaaatcaTACAATATTATa
atttaaagcattttttaaaCAGAAAACTTAACGAGGCATATGAAGATATC
TCAAAAGGAGACAGTCTTTGGACCAATGCTCCCTTGTCACCTAATGCACA
AAGTGCCATACCAAATCAACCAAAAAGGCAAGCACCAAAAGCTCCTATCT
CACCAACTTCCCCAACTTCACCGACACACAGTGAAAGTTTTGCATCCACG
TCCAGCACCAAAAAACGCAGCAAATCAACCAAAAGATATTCTGCACCACC
CCCACCTTCTGGTAAGATTTCAGGTTTCTTGATCAtgaatgttttttaaa
agatataaTCCCTGATATCATTTTACTTTGTTTTGGGTTTATATTAATTG
CACTTTTTCAGGGCTCCGAATGCggtctaggtccccccaacaaacttagg
tcccccctaagatttaggtcccccctaagatttaggtcccccctaagttt
aaggtccccctaagtttaaggtccccccagcccttcagattcccccactt
ttttagcccccgcccttgagtttcaaaaatctCCTACCCACTTTTAGGTC
GATTTTAGATTTACACCGCCCCCCAAATATAAGTGGGGGAGGGGAGCcat
gaaatttttgtaaaatttcattttgaataataataatgttttgtttttca
tctGTTATATTCTCGGCTTCAGCTGACATGATTTTATAATTTCACACTGC
AATagtcttttttgaattctaaaatatattttaccCAATCAGGGCATATT
TATAAAAGAATAATTCCCACTCTTgttaacctttttcaaatttcactaGA
AACAAAAACCACATAGAAAAGATCATTCAGGGCAAATTATATATAGAATG
ATTCTCATCTTTTGTTAACCTTAGAAACAAAAACCAGTTCGAAAAGATCA
CCACAATCTCCACGTTCACCAGTAGCTTCAAGTCAAACGTATAACATTCA
AATATCACAGGGTATAGTATTatattgaaaaaagtttattagaatttaca
taattttttttatatatgtaaCCTGACCTTGTTGAACGACCCTCTctgtt
aattatttttttaaattttccacttGGGATATTATGTCAAAACCCTCCCT
TATTACAGagggattaaaaaaaaaatgcaccCCTAGAATTTTTGAcgtaa
ctttttttcaatttatcatATCACCATGAAATCATCAACACCAATACCCT
AGTGGATTTGAGGCCTGCATGTGAGATTTGAGGCTTATAGCTCagatatt
tcttaaaatatgacagtttgaagaaaaagtacAATTTTCATAAATGTTTG
TTGTCCTTTCTtttctgacgtcaaaaaagaaaataccaTTCTTGTGATTG
GAGCATAATAGTGCTATAGGGATGCCCTGAAAGGATTCACAATGACAGAG
AGGTACTGTAAGGCTATATATTTAAGTAATTCTAggaaaaatcaagattt
ttggccaaaaagaCCAAATTTTATACTCTAGCAGAAGTGGTTAGAAACAC
CTTAATAGTCACACCAATCCTCTCTTTtagtaggggccactatgtcgcga
aaaaACTTCCCGTGTGCAACAggttgtgcaaagggattttatgattgaat
attgttccttgaatgtagaagatcaaaatttgagaggtcgGGCCGGGTGT
GAACAcctgttgccatggaaactgacgtcattggttactatggcaaccaa
aataaaaagtcgtcaaaattgaaaatcttttgttccattcgaaagaATTA
AAGTGAACCATAAcatcaaatcaaaaagttaaagaaGATTTGGTCCTTTT
TAACGGTTTTTCTCACATATAGCCTTTTATATGCAATCATCTGCAATGCA
TCTAGATTTATTTTTTCTCGGCGTCACACCAATCCTCTCTTTtagtaggg
gccactatgtcgcgaaaaagcttcccgtgtgcaacaggttgtgcaaaggg
attttatgattgaataatGTTTAACGGTATTTCATATTCAACTGAAATTC
TCCATTTTTGACGTGAACCTGAAACTACTAATTTCCCTTCAAACTTCTTA
TTCTTCATAAATATTTAAGCTATAACATTCAAATTTCACACATAGACTTT
GAAGTTACTAAGGAAAAAGGGTGTGAAACTTCAAAGCGATAGGgtgaata
aaaataaagttaCGTCAACAAATCTAGGGGTgcggtttttttttgtaagc
CCACCCTTTTCTAAATTTCCGCCTCATTCTCCTGTTTTTTCCAGTCTAGT
AAGCATTCAAGAGTAATGTAAGTagagttttcattttcaatttgaataaa
aaaaaacgctgtaaatttcatttctttccaCAGGAGATGCAGTATTACCA
GATGCAAAGAATATAATGTCACCATTGAGAAGTCTAACAttgaaagacaa
agaaaatgatgaagGTATTCAACAATTATTcattaaacctacctttttta
CGGACGGACAGCAATTtgtaatattaaaaatattactaAAAATATAGAAA
CTGCCATGCCCATCATTAGTTGAAGAGTACCAACTACAAACaaagtgttt
tcaaaaaattgacgaaatcatgaaaaccataatggtctaaataaaagaaa
ggttaaaatgataaataaatagTTCAGTCGTAATACTAAGTATGTATGTA
CAcatgaaaaactatttttcgaTGCCAACCAGATTCTaagaaatttttgt
attttaactgTCAGTAGAATTTGCTTATAAACTATTATATAATTGCTATT
GCACCACCATTTTAATGGCTTTAACATTGCGAgacattataaaaaattat
accTGTTGACTAGATCATTTTTAAAGTATTCATCTTTGTTATCTTGATAT
CAGTAAATTGATATGGAGTGAAACAAAGTCAACAGACTAGCAGTTTTTgt
gaaaatatgttttgattaaaaataacttcttcaaaacgaacaaaatctct
cagtttttatttgaaatcttttccTTTGCGGCCTATGGATTACTTACTGG
CCTAGTAATGGAGAGATGTGATCAAAAATGTTACATCACAGGACGATCAA
TTCGTGCATTGCTCATTCAGATCGCATTtgtaattacagttgacgctctg
taaaggtccaaaaaaaagtttccataaccttcaaattttgacgtggaGTG
CTCTAATTGTGCTATcaactttaaattttgtatgAATAAACTTTAACTTA
TATCAGGGCACTCTtgatattgaaacaaaaactgaTATTTTGTAGAGTTG
TtaggttttctaaaaaataggtaaaaattgACTGGTTCAAAAATGTTAGA
ACTGTGACAATGACGTAGATACaccccttattcgatgaaaatccgatccc
cttgaaaatcgaacaAGAGAGAGTGTCAACTTCTAAAACTGTAACATGGA
ATGtgtaaataaataagtaaagaaatttctttctttctttgttcaAAGGT
TCATCAACTAAAGTGACATCGATGCAAGGTACAAATCTCACAATTACAAG
AACAGAAAATGTTATGGATGAAGATGACCAAAGAAGTTTGTCAAACATAT
CCCTCGATTCTGCGTCGACTGGTTCGTTCGTTTCAGGGACCACCGCCACT
ACGAGAACAGGGTTTTCGGATGTAGCCGATAGACCTTGTGCTATAGCAGG
GCATTCAGGAATCAGAGGTTTTGAAGTGTCGGAAGCATTTGGTCAAGATT
TGGTTGACAAAGTAAGAGGGAGGTACGAGAgttttttttattcgaaaaaa
atatgattAGATACGAGGGTTTTAGATTGTTTTTCGTAAAAAAGAATGAT
TGGTTACGAAGGTTTTAAGattgtttttcgtcaaaaatatGATCGGTTGC
GAgagtttttgattattttttcgtaAAAAATGTGATTAAAAGATAAAGAA
GCATTTTTCTCCCCATTAAAATTCATTCAAAGGTTAGTGTTTTTATCTGA
TTTGATTGGTATTACTCGATTCTAAATGCTTTGTTTTCAAACAAACATTA
TAAAACTCTGCAAAACTCTATTTTACTTTTGCCAAAACCATGGTTTGGCT
TCCATATCATCATTTGGGTCTGTTACTCTCAatattaaatttcatttttg
ttacaTAGAATAATTGCAAACTCGAATTCTTCTACATGGAATTTGAACAG
CTTTAAAATACAGTTAACGCTCTCTAACTCGATTGGACTTCCATTGAGTA
AGCAGGGAGCGTATTTGATACtagaacgtcgtttatgagagctCCAATAC
CATCGAATAATTGAGGGTATCGAAAAATAGAATGccgaattaaagagcgt
caaaTGTATTGGAAAGATGGTCCGGGAACTATATAACTTTTAATGTAACT
TAACTCAAGTAAAGAAACTCTCTCATAATTCTCTTCTTCCACATTAAATA
GGTGTAAAATCAGTTTCAACAAATCATTGGCAGCTGTTCGTTGTGTGTTG
CAGAGCATTGGGAATGAAGTGCCAGACCTGTTTGAATTCACCAAAAGCAT
TGAAAGACACATACAAGACGAACGCTTAGTAAGTCAGTTACATGTTGTTT
TACAAACATTGCAtacatttataagcatattagAATCTATCATATGCTAA
Coding sequence (CDS) from alignment at sc0000001_pilon:1711472..1716971+ >XLOC_026470 ID=XLOC_026470|Name=XLOC_026470|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000001_pilon:1711472..1716971+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAAATCAATATGTGCATATCAAAGCAATAATGATGGTGTATTATC
TTTTCCCATTGGGAAAGTCTTCAATTTGATTGAACAGTTGGATGAACATT
GGTGGTCCATGCAAGATGAGTTTGGAAATAGTGGACTTATACCAGCATCT
TATCTTGAAGTTAACAAGATGTATAAATCAATATGTGCATATCAAAGCAA
TAATGATGGTGTATTATCTTTTCCCATTGGGAAAGTCTTCAATTTGATTG
AACAGTTGGATGAACATTGGTGGTCCATGCAAGATGAGTTTGGAAATAGT
GGACTTATACCAGCATCTTATCTTGAAGTTAACAAGATCACTAAAAATGA
TGTTTTGAAATCAATCAAGAAATCAGTAGACTGTATCAAAACAATTGCGC
AAAGTCATCATCGGAAATTAAATGAAACGGAACGAAGAAATGTagtATCA
CTAAAAATGATGTTTTGAAATCAATCAAGAAATCAGTAGACTGTATCAAA
ACAATTGCGCAAAGTCATCATCGGAAATTAAATGAAACGGAACGAAGAAA
TGTagtAAAACTTAACGAGGCATATGAAGATATCTCAAAAGGAGACAGTC
TTTGGACCAATGCTCCCTTGTCACCTAATGCACAAAGTGCCATACCAAAT
CAACCAAAAAGGCAAGCACCAAAAGCTCCTATCTCACCAACTTCCCCAAC
TTCACCGACACACAGTGAAAGTTTTGCATCCACGTCCAGCACCAAAAAAC
GCAGCAAATCAACCAAAAGATATTCTGCACCACCCCCACCTTCTGAAAAC
TTAACGAGGCATATGAAGATATCTCAAAAGGAGACAGTCTTTGGACCAAT
GCTCCCTTGTCACCTAATGCACAAAGTGCCATACCAAATCAACCAAAAAG
GCAAGCACCAAAAGCTCCTATCTCACCAACTTCCCCAACTTCACCGACAC
ACAGTGAAAGTTTTGCATCCACGTCCAGCACCAAAAAACGCAGCAAATCA
ACCAAAAGATATTCTGCACCACCCCCACCTTCTGAAACAAAAACCAGTTC
GAAAAGATCACCACAATCTCCACGTTCACCAGTAGCTTCAAGTCAAACGT
ATAACATTCAAATATCACAGGAAACAAAAACCAGTTCGAAAAGATCACCA
CAATCTCCACGTTCACCAGTAGCTTCAAGTCAAACGTATAACATTCAAAT
ATCACAGGGAGATGCAGTATTACCAGATGCAAAGAATATAATGTCACCAT
TGAGAAGTCTAACAttgaaagacaaagaaaatgatgaagGAGATGCAGTA
TTACCAGATGCAAAGAATATAATGTCACCATTGAGAAGTCTAACAttgaa
agacaaagaaaatgatgaagGTTCATCAACTAAAGTGACATCGATGCAAG
GTACAAATCTCACAATTACAAGAACAGAAAATGTTATGGATGAAGATGAC
CAAAGAAGTTTGTCAAACATATCCCTCGATTCTGCGTCGACTGGTTCGTT
CGTTTCAGGGACCACCGCCACTACGAGAACAGGGTTTTCGGATGTAGCCG
ATAGACCTTGTGCTATAGCAGGGCATTCAGGAATCAGAGGTTTTGAAGTG
TCGGAAGCATTTGGTCAAGATTTGGTTGACAAAGTAAGAGGGAGGTTCAT
CAACTAAAGTGACATCGATGCAAGGTACAAATCTCACAATTACAAGAACA
GAAAATGTTATGGATGAAGATGACCAAAGAAGTTTGTCAAACATATCCCT
CGATTCTGCGTCGACTGGTTCGTTCGTTTCAGGGACCACCGCCACTACGA
GAACAGGGTTTTCGGATGTAGCCGATAGACCTTGTGCTATAGCAGGGCAT
TCAGGAATCAGAGGTTTTGAAGTGTCGGAAGCATTTGGTCAAGATTTGGT
TGACAAAGTAAGAGGGAGGTGTAAAATCAGTTTCAACAAATCATTGGCAG
CTGTTCGTTGTGTGTTGCAGAGCATTGGGAATGAAGTGCCAGACCTGTTT
GAATTCACCAAAAGCATTGAAAGACACATACAAGACGAACGCTTAGTAAG
TCAGTTACATGTTGTTTTACAAACATTGCAtacatttataagcatattag
AATCTATCATATGCTAAGTGTAAAATCAGTTTCAACAAATCATTGGCAGC
TGTTCGTTGTGTGTTGCAGAGCATTGGGAATGAAGTGCCAGACCTGTTTG
AATTCACCAAAAGCATTGAAAGACACATACAAGACGAACGCTTAGTAAGT
CAGTTACATGTTGTTTTACAAACATTGCAtacatttataagcatattagA
ATCTATCATATGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:1711472..1716971 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 961-1158:5303 |
| Aaloc | 688-957:4351 |
| Aaloc | 607-684:3236 |
| Aaloc | 520-603:1777 |
| Aaloc | 280-516:924 |
| Aaloc | 169-276:659 |
| Aaloc | 1-168:1 |
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