|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:862025..864818- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026322 ID=XLOC_026322|Name=XLOC_026322|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2794bp|location=Sequence derived from alignment at sc0000058_pilon:862025..864818- (Clytia hemisphaerica_ch_hm2_pilon)
GACCAACCATTAACTCCTGAACCTGCAGCTACACCCAAACCTGCAGCTAC
ACCAAAACTTTCCTACAAATCCCCCGCAGTAACGGAGAAAGAAGTTGCGT
ACTGTACACAAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAG
TATGAAGACCAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCACC
CAATTGCCAAGCAGTCTCATCAACAGACGTTGGAACACCTTGTCTTGCAG
TTTTCACTGAAGACGAGGGTTGGTATCGTGCAGAAATCACAAAAAGCAAT
GGAGATAATGCAACGGTTTCTTTTGTAGATTACGGAAACACCCAAGATTG
CAAAGTTTCAAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTGCCAA
GAACGTGCATTGATTGCATTTTGCACGATGTCAGTGCCACTGATATTGAT
TCTTCAAAGAGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGT
TACACTTGAAGTTAAAGTACCTCTGGATAAAAACAACTCACTTGAAGCAT
ACGTTTATCAAGATGGAAGTGAAGATCATGTCAACGATCTGCTATATTCT
CTGTTCGCACTCGAAGAAGAATCCGTAGCAGAAACCCAACCTCCTGCTTC
ACAGCCGGCTCCGCAAGCTCCTGAAGAGAAAGCCAAACCAACACCTCCTG
CCAACCTTTCCTATCAATCTCCCATAGTAACAGAGAAAGAAATTGCGTAC
TGTATGCAAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAGTA
TGAAGACCAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCTCCCA
ATTGCCAAGCAGTCTCATCAACAAACGTTGGAACACCTTGTCTTGCAGTT
TTCACTGAAGACGAGGGCTGGTATCGTGCAGAAATCACAAAAAGCAATGG
AGATAATGCAACGGTTTCTTTTGTAGATTACGGAAACACCCAAGATTGCA
AAGTTTCAAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTACCAAGA
ACGTGCATTGATTGCATTTTGCACGATGTCAGTGACACTGACATTGATTC
TTCAAAGAGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGTTA
CACTTGAAGTTAAAGTACCTCTGGATAAAAACAACTCACTTGAAGCATAC
GTTTATCAAGATGGAAGTGAACGATCATGTCAACGATCTGCTATATTCTC
TGTTCGCACTCGAAGAAGAATCCGTAGCAGAAACCCAACCTCCTGCTTCA
CAGCCGACTCCGCAAGCTCCTGTCGTAAAAGCACAACCCTCGCTTCCTGC
AAACCTTTCCTATCAATCGCCCATAGTAACAAAGAAAGAAGTTGCGTACT
GTATGCAAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAGTAT
GAAGACCAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCACCCAA
TTGCCAAGCAGTCTCATCAACAAACGTTGGAACACCTTGCCTTGCAGTTT
TCACTGAAGACGAGGGCTGGTATCGTGCAGAAATCACAAAAAGCAATGGA
GATAATGCAACGGTTTCTTTTGTAGATTATGGAAACACCCAAGATTGCAA
AGTTTCAAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTGCCAAGAA
CGTGCATTGATTGCATTTTGCACGATGTCAGTGCCACTGATATTGATTCT
TCAAAGAGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGTTAC
ACTTGAAGTGAAAGTATCTCTGGATAAAAACAACTCACTTGAAGCTTATG
TTTATCAAGATGGAAGTGACGATCATGTCAACGATCTGCTATATTCATTG
TTTGCGCTTGAAGGATCTGAAGAAACTGAACCCTTCATCGAAACGCAACC
TTCCGAAGTTGTACCTGTCGTAGATGAACAACCGAAACAAGAACCTGCAA
AGTCTCCAGGATCGCAAATCACCCAAGGAACAAGTATCGCCTACCCTGAA
ATCATCCTTGAAAATAACTACAGTGCTGTCTGTTATGTCATTGATGATGC
CACACACTTGCGATGTCAGTTGACCCAATTCCAAGGACAAATTGACCAAA
TGATGGTGCACATTGCAAACAGTGTGGGTGAATATCCTCCACTTGAAGCT
TGTGAAGAAGGGAAAGTTTGTGTTGCCAAGTATGCAGCCGATGGTGGATG
GTACCGAGCCAGGATTGCCAAGAAGGATGACCAAGGCGCTCATGTTTATT
TCGTTGACTTCGGAAACATAGAAGTGATACCTGAAAGTGACCTCAAAGCA
ATCCCCATCGAATGCACCGCTTTACCACAGACCTGCATAACTGTCCAACT
GAATGATGTACATCCTGAAGATCTAGATACTAACGCTGCCAAGGCTTGGT
TGGTTGAGCAATTACTCGAGCGTGTCGTGAGGTTGGAAGTCAAGAATAAA
GAAGGGGTTGACGTCATCAGTGCTAACGTCTACTCGGAGGGAAGAGATCA
CCACGTCAACGACCAACTCTATGAAATGTTCGCATTAGAAGAAGATGTCG
TTATTGAGGAGACTGTTTCTGAAACACAATCAGTTTCTGAAATTCAATCT
GAAGCCCCGATCCCTACACCTGTTGAACCAGTCAAGTCGACCGTTATACA
ACCAAATTTATCTGTTGGTGAGAAACTTCCTGCGATTTGTTATCTTGTTG
AATCTGCGACAGTCTTGAAATGTCAACTTTCCTCGTATGCATCA Coding sequence (CDS) from alignment at sc0000058_pilon:862025..864818- >XLOC_026322 ID=XLOC_026322|Name=XLOC_026322|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5588bp|location=Sequence derived from alignment at sc0000058_pilon:862025..864818- (Clytia hemisphaerica_ch_hm2_pilon)
GACCAACCATTAACTCCTGAACCTGCAGCTACACCCAAACCTGCAGCTAC
ACCAAAACTTTCCTACAAATCCCCCGCAGTAACGGAGAAAGAAGTTGCGT
ACTGTACACAAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAG
TATGAAGACCAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCACC
CAATTGCCAAGCAGTCTCATCAACAGACGTTGGAACACCTTGTCTTGCAG
TTTTCACTGAAGACGAGGGTTGGTATCGTGCAGAAATCACAAAAAGCAAT
GGAGATAATGCAACGGTTTCTTTTGTAGATTACGGAAACACCCAAGATTG
CAAAGTTTCAAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTGCCAA
GAACGTGCATTGATTGCATTTTGCACGATGTCAGTGCCACTGATATTGAT
TCTTCAAAGAGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGT
TACACTTGAAGTTAAAGTACCTCTGGATAAAAACAACTCACTTGAAGCAT
ACGTTTATCAAGATGGAAGTGAAGATCATGTCAACGATCTGCTATATTCT
CTGTTCGCACTCGAAGAAGAATCCGTAGCAGAAACCCAACCTCCTGCTTC
ACAGCCGGCTCCGCAAGCTCCTGAAGAGAAAGCCAAACCAACACCTCCTG
CCAACCTTTCCTATCAATCTCCCATAGTAACAGAGAAAGAAATTGCGTAC
TGTATGCAAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAGTA
TGAAGACCAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCTCCCA
ATTGCCAAGCAGTCTCATCAACAAACGTTGGAACACCTTGTCTTGCAGTT
TTCACTGAAGACGAGGGCTGGTATCGTGCAGAAATCACAAAAAGCAATGG
AGATAATGCAACGGTTTCTTTTGTAGATTACGGAAACACCCAAGATTGCA
AAGTTTCAAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTACCAAGA
ACGTGCATTGATTGCATTTTGCACGATGTCAGTGACACTGACATTGATTC
TTCAAAGAGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGTTA
CACTTGAAGTTAAAGTACCTCTGGATAAAAACAACTCACTTGAAGCATAC
GTTTATCAAGATGGAAGTGAACGATCATGTCAACGATCTGCTATATTCTC
TGTTCGCACTCGAAGAAGAATCCGTAGCAGAAACCCAACCTCCTGCTTCA
CAGCCGACTCCGCAAGCTCCTGTCGTAAAAGCACAACCCTCGCTTCCTGC
AAACCTTTCCTATCAATCGCCCATAGTAACAAAGAAAGAAGTTGCGTACT
GTATGCAAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAGTAT
GAAGACCAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCACCCAA
TTGCCAAGCAGTCTCATCAACAAACGTTGGAACACCTTGCCTTGCAGTTT
TCACTGAAGACGAGGGCTGGTATCGTGCAGAAATCACAAAAAGCAATGGA
GATAATGCAACGGTTTCTTTTGTAGATTATGGAAACACCCAAGATTGCAA
AGTTTCAAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTGCCAAGAA
CGTGCATTGATTGCATTTTGCACGATGTCAGTGCCACTGATATTGATTCT
TCAAAGAGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGTTAC
ACTTGAAGTGAAAGTATCTCTGGATAAAAACAACTCACTTGAAGCTTATG
TTTATCAAGATGGAAGTGACGATCATGTCAACGATCTGCTATATTCATTG
TTTGCGCTTGAAGGATCTGAAGAAACTGAACCCTTCATCGAAACGCAACC
TTCCGAAGTTGTACCTGTCGTAGATGAACAACCGAAACAAGAACCTGCAA
AGTCTCCAGGATCGCAAATCACCCAAGGAACAAGTATCGCCTACCCTGAA
ATCATCCTTGAAAATAACTACAGTGCTGTCTGTTATGTCATTGATGATGC
CACACACTTGCGATGTCAGTTGACCCAATTCCAAGGACAAATTGACCAAA
TGATGGTGCACATTGCAAACAGTGTGGGTGAATATCCTCCACTTGAAGCT
TGTGAAGAAGGGAAAGTTTGTGTTGCCAAGTATGCAGCCGATGGTGGATG
GTACCGAGCCAGGATTGCCAAGAAGGATGACCAAGGCGCTCATGTTTATT
TCGTTGACTTCGGAAACATAGAAGTGATACCTGAAAGTGACCTCAAAGCA
ATCCCCATCGAATGCACCGCTTTACCACAGACCTGCATAACTGTCCAACT
GAATGATGTACATCCTGAAGATCTAGATACTAACGCTGCCAAGGCTTGGT
TGGTTGAGCAATTACTCGAGCGTGTCGTGAGGTTGGAAGTCAAGAATAAA
GAAGGGGTTGACGTCATCAGTGCTAACGTCTACTCGGAGGGAAGAGATCA
CCACGTCAACGACCAACTCTATGAAATGTTCGCATTAGAAGAAGATGTCG
TTATTGAGGAGACTGTTTCTGAAACACAATCAGTTTCTGAAATTCAATCT
GAAGCCCCGATCCCTACACCTGTTGAACCAGTCAAGTCGACCGTTATACA
ACCAAATTTATCTGTTGGTGAGAAACTTCCTGCGATTTGTTATCTTGTTG
AATCTGCGACAGTCTTGAAATGTCAACTTTCCTCGTATGCATCAGACCAA
CCATTAACTCCTGAACCTGCAGCTACACCCAAACCTGCAGCTACACCAAA
ACTTTCCTACAAATCCCCCGCAGTAACGGAGAAAGAAGTTGCGTACTGTA
CACAAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAGTATGAA
GACCAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCACCCAATTG
CCAAGCAGTCTCATCAACAGACGTTGGAACACCTTGTCTTGCAGTTTTCA
CTGAAGACGAGGGTTGGTATCGTGCAGAAATCACAAAAAGCAATGGAGAT
AATGCAACGGTTTCTTTTGTAGATTACGGAAACACCCAAGATTGCAAAGT
TTCAAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTGCCAAGAACGT
GCATTGATTGCATTTTGCACGATGTCAGTGCCACTGATATTGATTCTTCA
AAGAGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGTTACACT
TGAAGTTAAAGTACCTCTGGATAAAAACAACTCACTTGAAGCATACGTTT
ATCAAGATGGAAGTGAAGATCATGTCAACGATCTGCTATATTCTCTGTTC
GCACTCGAAGAAGAATCCGTAGCAGAAACCCAACCTCCTGCTTCACAGCC
GGCTCCGCAAGCTCCTGAAGAGAAAGCCAAACCAACACCTCCTGCCAACC
TTTCCTATCAATCTCCCATAGTAACAGAGAAAGAAATTGCGTACTGTATG
CAAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAGTATGAAGA
CCAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCTCCCAATTGCC
AAGCAGTCTCATCAACAAACGTTGGAACACCTTGTCTTGCAGTTTTCACT
GAAGACGAGGGCTGGTATCGTGCAGAAATCACAAAAAGCAATGGAGATAA
TGCAACGGTTTCTTTTGTAGATTACGGAAACACCCAAGATTGCAAAGTTT
CAAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTACCAAGAACGTGC
ATTGATTGCATTTTGCACGATGTCAGTGACACTGACATTGATTCTTCAAA
GAGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGTTACACTTG
AAGTTAAAGTACCTCTGGATAAAAACAACTCACTTGAAGCATACGTTTAT
CAAGATGGAAGTGAACGATCATGTCAACGATCTGCTATATTCTCTGTTCG
CACTCGAAGAAGAATCCGTAGCAGAAACCCAACCTCCTGCTTCACAGCCG
ACTCCGCAAGCTCCTGTCGTAAAAGCACAACCCTCGCTTCCTGCAAACCT
TTCCTATCAATCGCCCATAGTAACAAAGAAAGAAGTTGCGTACTGTATGC
AAGCTTGCTCGTCAACACTCCTTAAAGTTCAGTTACAGAAGTATGAAGAC
CAACTTAATGCACTGATGGAAAAATTATCTACTGAAGCACCCAATTGCCA
AGCAGTCTCATCAACAAACGTTGGAACACCTTGCCTTGCAGTTTTCACTG
AAGACGAGGGCTGGTATCGTGCAGAAATCACAAAAAGCAATGGAGATAAT
GCAACGGTTTCTTTTGTAGATTATGGAAACACCCAAGATTGCAAAGTTTC
AAGTTTGAAATCGCCTTCCTCAGAAATGGTTCAACTGCCAAGAACGTGCA
TTGATTGCATTTTGCACGATGTCAGTGCCACTGATATTGATTCTTCAAAG
AGCTTGGAACATCTCAAGTCCACCCTGGTTGATCAACAAGTTACACTTGA
AGTGAAAGTATCTCTGGATAAAAACAACTCACTTGAAGCTTATGTTTATC
AAGATGGAAGTGACGATCATGTCAACGATCTGCTATATTCATTGTTTGCG
CTTGAAGGATCTGAAGAAACTGAACCCTTCATCGAAACGCAACCTTCCGA
AGTTGTACCTGTCGTAGATGAACAACCGAAACAAGAACCTGCAAAGTCTC
CAGGATCGCAAATCACCCAAGGAACAAGTATCGCCTACCCTGAAATCATC
CTTGAAAATAACTACAGTGCTGTCTGTTATGTCATTGATGATGCCACACA
CTTGCGATGTCAGTTGACCCAATTCCAAGGACAAATTGACCAAATGATGG
TGCACATTGCAAACAGTGTGGGTGAATATCCTCCACTTGAAGCTTGTGAA
GAAGGGAAAGTTTGTGTTGCCAAGTATGCAGCCGATGGTGGATGGTACCG
AGCCAGGATTGCCAAGAAGGATGACCAAGGCGCTCATGTTTATTTCGTTG
ACTTCGGAAACATAGAAGTGATACCTGAAAGTGACCTCAAAGCAATCCCC
ATCGAATGCACCGCTTTACCACAGACCTGCATAACTGTCCAACTGAATGA
TGTACATCCTGAAGATCTAGATACTAACGCTGCCAAGGCTTGGTTGGTTG
AGCAATTACTCGAGCGTGTCGTGAGGTTGGAAGTCAAGAATAAAGAAGGG
GTTGACGTCATCAGTGCTAACGTCTACTCGGAGGGAAGAGATCACCACGT
CAACGACCAACTCTATGAAATGTTCGCATTAGAAGAAGATGTCGTTATTG
AGGAGACTGTTTCTGAAACACAATCAGTTTCTGAAATTCAATCTGAAGCC
CCGATCCCTACACCTGTTGAACCAGTCAAGTCGACCGTTATACAACCAAA
TTTATCTGTTGGTGAGAAACTTCCTGCGATTTGTTATCTTGTTGAATCTG
CGACAGTCTTGAAATGTCAACTTTCCTCGTATGCATCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:862025..864818 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2185-3756:1573 |
| Aaloc | 964-2184:2795 |
|
