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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000377_pilon:235439..239791- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026305 ID=XLOC_026305|Name=XLOC_026305|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4353bp|location=Sequence derived from alignment at sc0000377_pilon:235439..239791- (Clytia hemisphaerica_ch_hm2_pilon)
AGCAGAGAAATGGAATGGAAAGAGAATGACTTGCCATTCGCGGATATCCC
GTTGTTATTAGGTGATGGGTTTGAAGAAAAAGTTGAGAACACCTTTGCAG
ATGTACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGATGGTAAGTAA
CGCTCTGCTGTGGGCCACGGGCTGTACATTATTAACGTTTCTTAAACGAT
ACAATTATGGATATTCCGAGCTTTAAGTTCAAGGCAAAAAGTATTAAGAT
TACGTAAGGCATAATCGAGAAAAAGAGAAAGACGAGTATAACTTATAATT
AACAAAGGAGCTCTACACAATTCCGAAGAATCAACCTTTGAAAGTACTTA
CGCTAAAAGTACTCTCACTAATCTGAACTCGAAGATGGAGTCAAACTTGT
TTGAGTTAAATGAAATTGGGTAATTAAATTTCTATTATAGATAATAGACG
AAACACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGCTTCCA
TAAAGTTTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATTCAAAAAT
CTCGATTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGGTATTCA
ATCTTATTACTTTTAGATACAATAGTGTCAAAAAAAACAAGAATCTTGGT
CAAACGTTAAAAAATCTTTCTATTGATTTACCCAAACCAATTTGACAATC
TTTTTACTTTTGCCAGAAAGCAAAATATAGATTTAGCTCCCAAAGCTATA
CAGGTCTGCATTTTTGACGATTTCTAAAAAATTATTTTCAACAACACTCT
TAATCCTTCAAGCATCTCGTCAAGCACTTAAAACGAAAAACTTTTTTAAT
AACTTTTGAAATATTTATCCAATTGACAAGTTTGTCAGTATGCACCAAAT
ATGGATTGACATAATTGGTAAAAATCTCTGTATTACCTTATCGGCCAAAA
TTAGTCGGCCTCAATTTTAGTCGCCCCAAAATTTTAGTCGGCCCTAATTT
TAGTTACCGAGCCAAAATTTAGTCACTTAGAGCCGAGTAAGTTTTGGCCG
ATAAGGTATAAAAAACTTCATCGTCACTTGATGACGTCATCTATTTTACT
AAATTTTGTGATATACCTTATCGGGGGGAAGAAACTCGGGGATAAGTGAC
TAATTATCTAATTAACTAATTAAGTAACTAATTAAAATTAAAATTTTCCC
CGACTCAAAAAAATACCGGCTTTTTTTTCCTCGATAAGGTAGTGTTCTCG
TCTCCTGATTCACCCTTGCGTTTCTGTAGCTTATACATAGATGATGTTCT
TTACCTGTTATAAATTGCTTTAATCTCAGGTTATCCGAAGATCTGTATTG
ACGACAAAGGAAAGATAAAGGCGGCGTCAATACAGATCAATCAAACTGAA
GAGGAGCTTAATGAATTTTTCGTACAAAACTTTCCAAATTTGAGGCGGTC
ACCGATATATTTTTTTAAAATCGGCAACCATGGAAAATATGTGCCCCTCC
AGATCAAAACCCCTCAAGACTTGAGAAATTTAGCAAAAGACGGGAAACGC
TACCAAGGCATTGTTATTGTTACGAATCACGACCTTAGTCAAGGTTAGTT
TAATGACAATCTTATTTTTTCCCTTTCCTTGTAGCAACTAATGATTCTTA
CATCTCGTTGAAAAGATAATTCAGAGCACTATAATTTCCGAGAAAAATTA
TTAAAAAAAAATGAAAATGAAGATGAAAAATGAAGAAAAAAAAAAGAAAT
TTTTATCCTTTGGTGCTAGAAACTTAATTTTTGGTGCATAAGTACTTATG
AAGCCTCCTGATAATCCTGGTTTTAAAATTTTCGCGAGCATTAAATAATT
CGTTAATCTTCGAAATACTGGCAGGGGTAATATAATTCTCGCGTAAATTA
AGTAGCCAACAAAACTATGACATGTTATACATTATTCTCAACTTCAGCAA
CTATTCTTGAATCTGAAAATTTCAAAAGTGAACTAAGAAAAAATCACGAA
GAAGAATATGAGGACTTTTGCGAAGAAGAGTATTTCAACTTTAAGGACCT
TAGTTTTGGCGAAGAAAAAATCTTTTGGAAAAATATTTGGCCTAGGTGGT
TGTAGATTTGCGGAAATTTTTTTAAAAGCATCTTTGTACCAAAATCTTAA
AAATAGTGGTTTTGGATTTTTCTTCCCAATATTTCATACAAATACACTCA
TATCTTACGTCAATAAACCCTATTAACCCCGGGGGGGGGGGGTAGAATCT
ACCACGCTGGAGTTCTTTTGTGTATATCTCGGAAAAAAATTTTTTAAACG
ACTTGAAACTTTTTGACTTTTAAGAAAATCTTATTAAGCGTACTTGTGCA
AAATTTTAAGTTCATAGATGGTCCAGATCAGGTTTTATGACTTTATTGTG
AAACATGACTTAAAACCCAGCTAACATCGCTTTTAAAACTCAAAATCTTA
AAGTGCTGATAACTTCTGAACTATTTATTTAATCATTGTCAAACATTGAC
AATATAAGTTTAAAAAATTAAAAATCAAAAAAATCAAAATGATGACGTCA
TCATATATGACGTCATCAAATTTTGAAAGTTTTACTCATCTTCATCACAT
ATTTTAAGAAAGAATCTTCATGAAAAATGCAAAACCGGCAATTATGTTAA
AGGGCAACCTTTTATCTTCAGAATCTTTAATCAGAATCTAAATATCTTTA
TTGGTTCGACTATAATAGACATCTTCCTGGAAATTTATGTCATAACTTTC
CTAGATCAATAATAACCGAGGGTGGTAGATTCTACCCCTCCCTGGGGATA
CAAAAATCAAAAAAACTTGGGGCTAATAGGTTTAAGAACATTTTTCCGCA
AACTTTCAAACAGTTCAATCCCTGGTTCAATTCTTTGCGGAAAATCTGAA
AAAATCGAAACAAAAAGGCTAATTACTCATTAAAACTTAGAATCTTTTGT
AAAAGAGGGTATTATGACGTTTTATTAACGTCTTTTTAAAGTTCATAACG
TCATTTTTGTAATTAAATTCGTAATTACTCTTCACATAGTAAATTAGCAA
ACAATTTGCGAAGGTAGTTTTATGTTAAAAATGTCAAGGAACCTGAAACA
AAAGTTTTATCTTCAAATCAGACATAACCGATTTTCTGACTATGGTCAGA
GCCCTTAATCCTCTTACAGTAAGGTACAATTATTTTTCGCGAAAAGTTCA
TGAAGTTTCTAGCACCAAAGGATTTTTTGAATTACTTTTCTCAGAAATTA
AAGTATATTTCAAATTAGCTGTCAGTAAAATTTGAAATGCTCATAACTTT
TGATATACTTTCAGCTAGATAGCAAATTTATGCGCATTGAAAAGATACTT
GTGAGCACGGAATTCCGTGTTATAAAGGTGTTTCTCGTTATAAAGAAAAA
CAGCGTGTAAGGAATTTAAAAAAGTCAAACATTGCAGTGATATTTCAAAT
AACGCCCAAGATGGGATACTCGTGGTACCTGATAAAATTTTCTACTTAAT
GGTGTAAAAAAATAAATTTCAGTGTGTGTCTATTACACCCTCTCAAACAA
ATATACCTATTTTCAATTTAGGCGTTCTTTCAGATAGTCAAATGAAAGAA
CAGAAAGAAAGAAAACAAGTAAAGATAGAGACACAAGATACAAGTAATGA
AACAAGCTTATTTCTCGAGTGTTTTCTTTAACTTGCACGTCGACAAGGAC
TTGCCGGGAGAAAACGAATCTTGTCAAATCTTTGTTTTAAAAAGAATAGC
ACCCAACTTGCAAAGTTTTTAATAATTTTATCAAAAAGAAGAAAAAGTCG
AACGTGTGTGCATTTTTCCAACTATTTGGGGGGGAGGTCTCCAATCGAGT
TCATAGTCTTACCAGTCGTCAAAAATCAAAATTTTGCTTTTCATTTCAAA
TAATTTCAAATTTACTTTTTTTAGATTCATCTGAATTGATAAAAGATTCA
TTCATACCGATACCAAGACCCCGTCCCCCACAGGAAACGTCCCGAAATGA
ACAGCGGTCTCCTTCTCCCACGTTATGGTGGAGTAATACACAATTTCACG
CTGATAAACACGTGCCCTCTTGATACATGGTTCAGTATTTTGATATATAT
TAACTCGACACACCCAGGATTCATCGACGATATACCAAAGTCAAAAGAAT
TCCAACGACTTTGGTCGTATATTACTGTTGGTGAATTTACTGGCGCAAAG
CTCAACGTTTCCAAAGATATGAATTTACAAGCAAACCCAGGAAAGACAAT
ATCCTTCTTTTTCAGTGAGGTGGAAATCGTTTACCGACCCTATCTGTGCG
ATTACATGTCGTGTAACATGGTATCCACCTGTACTAACACATCATGCAGA
ATG Coding sequence (CDS) from alignment at sc0000377_pilon:235439..239791- >XLOC_026305 ID=XLOC_026305|Name=XLOC_026305|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2120bp|location=Sequence derived from alignment at sc0000377_pilon:235439..239791- (Clytia hemisphaerica_ch_hm2_pilon)
AGCAGAGAAATGGAATGGAAAGAGAATGACTTGCCATTCGCGGATATCCC
GTTGTTATTAGGTGATGGGTTTGAAGAAAAAGTTGAGAACACCTTTGCAG
ATGTACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGATGAGCAGAGA
AATGGAATGGAAAGAGAATGACTTGCCATTCGCGGATATCCCGTTGTTAT
TAGGTGATGGGTTTGAAGAAAAAGTTGAGAACACCTTTGCAGATGTACAG
TTGGCAAGGACCTTTTCTTTTGCCAGAAAGGATGATAATAGACGAAACAC
CGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGCTTCCATAAAGT
TTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATTCAAAAATCTCGAT
TGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGATAATAGACGAAA
CACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGCTTCCATAA
AGTTTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATTCAAAAATCTC
GATTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGGTTATCCGAA
GATCTGTATTGACGACAAAGGAAAGATAAAGGCGGCGTCAATACAGATCA
ATCAAACTGAAGAGGAGCTTAATGAATTTTTCGTACAAAACTTTCCAAAT
TTGAGGCGGTCACCGATATATTTTTTTAAAATCGGCAACCATGGAAAATA
TGTGCCCCTCCAGATCAAAACCCCTCAAGACTTGAGAAATTTAGCAAAAG
ACGGGAAACGCTACCAAGGCATTGTTATTGTTACGAATCACGACCTTAGT
CAAGGTTATCCGAAGATCTGTATTGACGACAAAGGAAAGATAAAGGCGGC
GTCAATACAGATCAATCAAACTGAAGAGGAGCTTAATGAATTTTTCGTAC
AAAACTTTCCAAATTTGAGGCGGTCACCGATATATTTTTTTAAAATCGGC
AACCATGGAAAATATGTGCCCCTCCAGATCAAAACCCCTCAAGACTTGAG
AAATTTAGCAAAAGACGGGAAACGCTACCAAGGCATTGTTATTGTTACGA
ATCACGACCTTAGTCAAGGCGTTCTTTCAGATAGTCAAATGAAAGAACAG
AAAGAAAGAAAACAAGTAAAGATAGAGACACAAGATACAAGCGTTCTTTC
AGATAGTCAAATGAAAGAACAGAAAGAAAGAAAACAAGTAAAGATAGAGA
CACAAGATACAAATTCATCTGAATTGATAAAAGATTCATTCATACCGATA
CCAAGACCCCGTCCCCCACAGGAAACGTCCCGAAATGAACAGCGGTCTCC
TTCTCCCACGTTATGGTGGAGTAATACACAATTTCACGCTGATAAACACG
TGCCCTCTTGATACATGGTTCAGTATTTTGATATATATTAACTCGACACA
CCCAGGATTCATCGACGATATACCAAAGTCAAAAGAATTCCAACGACTTT
GGTCGTATATTACTGTTGGTGAATTTACTGGCGCAAAGCTCAACGTTTCC
AAAGATATGAATTTACAAGCAAACCCAGGAAAGACAATATCCTTCTTTTT
CAGTGAGGTGGAAATCGTTTACCGACCCTATCTGTGCGATTACATGTCGT
GTAACATGGTATCCACCTGTACTAACACATCATGCAGAATGATTCATCTG
AATTGATAAAAGATTCATTCATACCGATACCAAGACCCCGTCCCCCACAG
GAAACGTCCCGAAATGAACAGCGGTCTCCTTCTCCCACGTTATGGTGGAG
TAATACACAATTTCACGCTGATAAACACGTGCCCTCTTGATACATGGTTC
AGTATTTTGATATATATTAACTCGACACACCCAGGATTCATCGACGATAT
ACCAAAGTCAAAAGAATTCCAACGACTTTGGTCGTATATTACTGTTGGTG
AATTTACTGGCGCAAAGCTCAACGTTTCCAAAGATATGAATTTACAAGCA
AACCCAGGAAAGACAATATCCTTCTTTTTCAGTGAGGTGGAAATCGTTTA
CCGACCCTATCTGTGCGATTACATGTCGTGTAACATGGTATCCACCTGTA
CTAACACATCATGCAGAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000377_pilon | genome | sc0000377_pilon:235439..239791 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 691-1059:370 |
| Aaloc | 634-690:428 |
| Aaloc | 562-630:781 |
| Aaloc | 298-558:3023 |
| Aaloc | 145-294:3912 |
| Aaloc | 1-141:4354 |
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