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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:4020477..4021908+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026228 ID=XLOC_026228|Name=XLOC_026228|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1432bp|location=Sequence derived from alignment at sc0000001_pilon:4020477..4021908+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTAGAATAACTCAAAAAATAAGAGCAATCGAAAAGTGTATTTCAAacta
tttcaattttattttgttgaaagttgaaaagcCGAAAGAAAAAATGTCAG
ATACCGAAGATGTGCCAGCAATATTGCCTAACAATGAACTAGCCCTGGTG
AAGCAAAGACTTTCATGTTACACAGAATGTATTATTGGAACGCGAAATTT
TGTTCAAGAAATCACTCGCTCGATATTAGGTATTGAAAAAGCTATGGCGA
CTGTATCCAAACATGTCAATCAACTATCCGATTCTGAAGAGAGAgctttt
gaaaatctaaaaagttgTCGAGTGAAAATTATGAGAGTTTTTGCCAGGAG
CCATGGTGTTGTTAAAGATATTGAGTGGCTAGCAGAAAGATTGCTaaaaa
aaCTTAGCAAAGTGAATGCTGGGGATAGCCaagagaagaaagaagagaaa
tatGCAAAGGCTATTGATGACTTTgaggaaaatgtcaaaactcGCCTAGA
AGAAGTGCGAAACGTCTGTATGGAGTTTGATGAAATATCAGAGAACGGTT
TTGAGATAAACACTGCTATTGAAAAACTTAAGGACTCCGTTAGAGTCAAA
CAAATACAATTAAAAACGCAAATTGGTTCAGAGATAACAAAGACAAGGAT
CTGTTATATCACTTCAGGAACAGGTAGTTACACTTTAGACCTGAACTTTC
TTCTTTGTCCCTGTTGTTGAACAAAAAATCGACGAGTAGTTGAAAGTAGT
TGATCTTAATTTCgctttaaaaaagatttaaagaattttatagcagtgga
aaataaaaacagtgTAAAGTAAAGCTTACTATATGGCAAGCGTTTTGGta
gaaaatgtctttttttagtGACAATAAtacaaaactgaataaaaaagcaa
gcttcttcaatattaacaaaaattttttttaatttcagctgCCGTCATTG
TTGCTTATTTAGCATTTAATGGTTATTTAAAATCAATAGCTTTAAATGTA
TTAAAGTCCGCAAATCTGGCTACTGCAGCAGAAAGTTTAGTTGCAGCTGA
AGACATCCAATTGGAGGAAGCAACAACTAAAGGTACCTTATTTTCACAAG
TGGCACAAGGGGTCTTTGCTGCAATCTCTGCTTCATCTTTGTCCTATGGC
ATAGGTGAACACTTGGTCGTCAAAGATATTCAACGACAGCTGAAGGAGGG
TAATAAAATTATTGAATTGATTGCAGAGCACAttacaaaatttgaagaaa
agtatCTCGAAATTAAAGCATTAATCAAAGTCAAGAAAGAAAACATGGAT
GAAATCAAATACCAAATGCAGCATTGTCAAGCTGATGTGCGAAATGTCAA
AGACTGCAATTTTGATGATGAGGAAATTGAAGACTTAAAAGAACATTTGA
AAAGTCTGATCGCAGAATGTCAGGCCTACCAA Coding sequence (CDS) from alignment at sc0000001_pilon:4020477..4021908+ >XLOC_026228 ID=XLOC_026228|Name=XLOC_026228|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2334bp|location=Sequence derived from alignment at sc0000001_pilon:4020477..4021908+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTAGAATAACTCAAAAAATAAGAGCAATCGAAAAGTGTATTTCAAacta
tttcaattttattttgttgaaagttgaaaagcCGAAAGAAAAAATGTCAG
ATACCGAAGATGTGCCAGCAATATTGCCTAACAATGAACTAGCCCTGGTG
AAGCAAAGACTTTCATGTTACACAGAATGTATTATTGGAACGCGAAATTT
TGTTCAAGAAATCACTCGCTCGATATTAGGTATTGAAAAAGCTATGGCGA
CTGTATCCAAACATGTCAATCAACTATCCGATTCTGAAGAGAGAgctttt
gaaaatctaaaaagttgTCGAGTGAAAATTATGAGAGTTTTTGCCAGGAG
CCATGGTGTTGTTAAAGATATTGAGTGGCTAGCAGAAAGATTGCTaaaaa
aaCTTAGCAAAGTGAATGCTGGGGATAGCCaagagaagaaagaagagaaa
tatGCAAAGGCTATTGATGACTTTgaggaaaatgtcaaaactcGCCTAGA
AGAAGTGCGAAACGTCTGTATGGAGTTTGATGAAATATCAGAGAACGGTT
TTGAGATAAACACTGCTATTGAAAAACTTAAGGACTCCGTTAGAGTCAAA
CAAATACAATTAAAAACGCAAATTGGTTCAGAGATAACAAAGACAAGGAT
CTGTTATATCACTTCAGGAACAGACTAGAATAACTCAAAAAATAAGAGCA
ATCGAAAAGTGTATTTCAAactatttcaattttattttgttgaaagttga
aaagcCGAAAGAAAAAATGTCAGATACCGAAGATGTGCCAGCAATATTGC
CTAACAATGAACTAGCCCTGGTGAAGCAAAGACTTTCATGTTACACAGAA
TGTATTATTGGAACGCGAAATTTTGTTCAAGAAATCACTCGCTCGATATT
AGGTATTGAAAAAGCTATGGCGACTGTATCCAAACATGTCAATCAACTAT
CCGATTCTGAAGAGAGAgcttttgaaaatctaaaaagttgTCGAGTGAAA
ATTATGAGAGTTTTTGCCAGGAGCCATGGTGTTGTTAAAGATATTGAGTG
GCTAGCAGAAAGATTGCTaaaaaaaCTTAGCAAAGTGAATGCTGGGGATA
GCCaagagaagaaagaagagaaatatGCAAAGGCTATTGATGACTTTgag
gaaaatgtcaaaactcGCCTAGAAGAAGTGCGAAACGTCTGTATGGAGTT
TGATGAAATATCAGAGAACGGTTTTGAGATAAACACTGCTATTGAAAAAC
TTAAGGACTCCGTTAGAGTCAAACAAATACAATTAAAAACGCAAATTGGT
TCAGAGATAACAAAGACAAGGATCTGTTATATCACTTCAGGAACAGctgC
CGTCATTGTTGCTTATTTAGCATTTAATGGTTATTTAAAATCAATAGCTT
TAAATGTATTAAAGTCCGCAAATCTGGCTACTGCAGCAGAAAGTTTAGTT
GCAGCTGAAGACATCCAATTGGAGGAAGCAACAACTAAAGGTACCTTATT
TTCACAAGTGGCACAAGGGGTCTTTGCTGCAATCTCTGCTTCATCTTTGT
CCTATGGCATAGGTGAACACTTGGTCGTCAAAGATATTCAACGACAGCTG
AAGGAGGGTAATAAAATTATTGAATTGATTGCAGAGCACAttacaaaatt
tgaagaaaagtatCTCGAAATTAAAGCATTAATCAAAGTCAAGAAAGAAA
ACATGGATGAAATCAAATACCAAATGCAGCATTGTCAAGCTGATGTGCGA
AATGTCAAAGACTGCAATTTTGATGATGAGGAAATTGAAGACTTAAAAGA
ACATTTGAAAAGTCTGATCGCAGAATGTCAGGCCTACCAActgCCGTCAT
TGTTGCTTATTTAGCATTTAATGGTTATTTAAAATCAATAGCTTTAAATG
TATTAAAGTCCGCAAATCTGGCTACTGCAGCAGAAAGTTTAGTTGCAGCT
GAAGACATCCAATTGGAGGAAGCAACAACTAAAGGTACCTTATTTTCACA
AGTGGCACAAGGGGTCTTTGCTGCAATCTCTGCTTCATCTTTGTCCTATG
GCATAGGTGAACACTTGGTCGTCAAAGATATTCAACGACAGCTGAAGGAG
GGTAATAAAATTATTGAATTGATTGCAGAGCACAttacaaaatttgaaga
aaagtatCTCGAAATTAAAGCATTAATCAAAGTCAAGAAAGAAAACATGG
ATGAAATCAAATACCAAATGCAGCATTGTCAAGCTGATGTGCGAAATGTC
AAAGACTGCAATTTTGATGATGAGGAAATTGAAGACTTAAAAGAACATTT
GAAAAGTCTGATCGCAGAATGTCAGGCCTACCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:4020477..4021908 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 676-1167:941 |
| Aaloc | 1-672:1 |
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