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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000336_pilon:7064..9331- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026207 ID=XLOC_026207|Name=XLOC_026207|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2268bp|location=Sequence derived from alignment at sc0000336_pilon:7064..9331- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAAGAAAAAGAAGTGTTTTAATTGTCAGAAAACTGGGCATATTTCGAA
ATTCTGCCCAGAAATCAAATCTGAGACAGGGGCGATTAGAGATGATGTCA
AGCCTGCTCCGCGTACTATTATCAAGATAAACACTTGTGGAAAGACAGTT
GACTTTTTGTACGATACGGGTTCACAGGTCACCATCATGAAACGACAAGA
CTTCGAGAACTTACCAAATAAACCACCACTCCAAAAAGTCGAACGCTCAG
GTACCGCAGTCGACGGCACACCGTTCAAATTTGATGGTATTGCTTATTTG
AATCTATCGTTCCCATCAAGTGACAGTAATAGACATAGACAATACACATT
AGAGTATGAACCCATTCTCATTTCATCTAACGTTGAATCGAATATTTATG
GTGCTCAGACGGAGGAGAAATTTAGAAAATGTGAAAGAGACATTGAAAAC
TCTACACTTAGTTACACGACGAAAGAGAATGAAAAAGTTACAGTACAATG
TTATCGGGAGAAAATTTCGTCAGTCACAGCTTACGTCAAAGTCGCTAAAG
TTGCTTATCTACCACCCAACCATACCATGATGATCAAAGGTCGAATCAAT
TCACCGAAAACAATCACTGGGACAAGCTTTTTATGTGAAAATGAAGAGTT
ACCAAATTGCTTGAACGTAAACGAACTAACTTTCGAAAACGTTGAAAGAA
ACATCACCATACCGATAACCAACCATTCTGAAGTCCAACAGAAACTGAAA
AAGGGACAAATTGTTGCAGAAATTCGAGAAATAGAAAGTTGTCCAGAAGA
GAGTAAAATCCAAGTAAATGCTACGGATGCGTCGAATAAACTTCCTTTGG
ATACCGAATCAACTGAACGAAACGAGATTCAAAAATTAGAAACAATTTTA
GAAACTTATTACGGTGCTATTGAGAATTCACCTTTGTCGAGATCGAAACT
ACCTTTGAAACATTCGATAAACCTTACTGATGACGCGCCAACAGTTTGTG
CACCCAGATCGATCCCTCACGCTCGAAAAGAGGCAGTAAACGAACAAATA
AAAACATTATTGGAAAATGGATGTATCGAGAGGTCATACAGTCCATATTC
AGCTCCGATAGTACCGGTTTTGAAACCTGATGGTTCGCTACGATTTTGCA
TTGACTATCGCAAATTGAATACCAAAACCATAAACAACAAATATCCGATC
GCTCGAAATGAAGACCTTTTAGACGGACTGAAAGGGTGTAAATATTTCTC
TGTTATTGATTTGAAAGCAGCTTATCATCACATCGCTATGGAGGAGACCG
ACAAATTGAAAACCGCCTTCGATTCACCGCAGGGAAAATTTCAATGGATA
GTTATGCCTTTCGGTTTGACTGGCGCAGCCTTTACCCTTTCTGCAAATCT
ATCTGAAGTTTTGAAAGATTGTTACGAATTCGCTCGTATGTTTTTCGACG
ATGGCTTGATCTTTTCAAAAACGAAAGAAGATCACTTTGAGCATATTCGA
AAGATTACTGAATTATTTGCAAAGTACGGTTTACACATAAACTTTCGAAA
AAGTCAATTTTTTAAAAGTGAAGTGATATTTTTGGGACATGTAGTTAACC
AGAACGGAATTCGTGCTGAGAAAACAAAAATTGAGGAAATTGTGAACATC
AAAACACCGGAAAATTTAAATGAACTCCGTTCTTTTCTGGGGATGGTTGC
TTTCTTCAGGAAATTCATTCCAGATTTTTCCCATTATGCTGCAGATTTAT
TTTCACTATTGAAAAAAGGAACTCGTTTTCAATGGACAGAAAAACACGCT
ACAAGTTTCAATGAGATCAAAAGACTTTTATCTGAAAATGTTCTTTTGCT
CCACCCAGATTATACAAAGCCATTCGTTTTGTTTACAGATGCTTCAAATG
TGGCTGTGGGGTTTACCCTGACACAAGAGAACGAAGGAACCTTTTGTCCA
ATTTTATACGTAGGTCGTTCTTTATCTATTTGTGAAATGAACTATTGTAC
TACTGACAAAGAACTTTTGGGGCTCTATTATTCAGTTAAAAAGAGCGAAT
TTTACATAACAGATCAAATTGTTATTGTTTATACCGACCATAAACCGCTG
ACCTATCTATCCACGTTTCGTGATATTGTAAATAAAAGATACCGCTGGAT
AGAATATATTGAGAACATAGGAATTATTATTCGTTACATTGAAGGAAAAG
ACAACGTCATAGGTGATTATATCAGCAGAAATTTAAAAACAGACATTAAA
ACTGAAAAACGTTGGAGA Coding sequence (CDS) from alignment at sc0000336_pilon:7064..9331- >XLOC_026207 ID=XLOC_026207|Name=XLOC_026207|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4020bp|location=Sequence derived from alignment at sc0000336_pilon:7064..9331- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAAGAAAAAGAAGTGTTTTAATTGTCAGAAAACTGGGCATATTTCGAA
ATTCTGCCCAGAAATCAAATCTGAGACAGGGGCGATTAGAGATGATGTCA
AGCCTGCTCCGCGTACTATTATCAAGATAAACACTTGTGGAAAGACAGTT
GACTTTTTGTACGATACGGGTTCACAGGTCACCATCATGAAACGACAAGA
CTTCGAGAACTTACCAAATAAACCACCACTCCAAAAAGTCGAACGCTCAG
GTACCGCAGTCGACGGCACACCGTTCAAATTTGATGGTATTGCTTATTTG
AATCTATCGTTCCCATCAAGTGACAGTAATAGACATAGACAATACACATT
AGAGTATGAACCCATTCTCATTTCATCTAACGTTGAATCGAATATTTATG
GTGCTCAGACGGAGGAGAAATTTAGAAAATGTGAAAGAGACATTGAAAAC
TCTACACTTAGTTACACGACGAAAGAGAATGAAAAAGTTACAGTACAATG
TTATCGGGAGAAAATTTCGTCAGTCACAGCTTACGTCAAAGTCGCTAAAG
TTGCTTATCTACCACCCAACCATACCATGATGATCAAAGGTCGAATCAAT
TCACCGAAAACAATCACTGGGACAAGCTTTTTATGTGAAAATGAAGAGTT
ACCAAATTGCTTGAACGTAAACGAACTAACTTTCGAAAACGTTGAAAGAA
ACATCACCATACCGATAACCAACCATTCTGAAGTCCAACAGAAACTGAAA
AAGGGACAAATTGTTGCAGAAATTCGAGAAATAGAAAGTTGTCCAGAAGA
GAGTAAAATCCAAGTAAATGCTACGGATGCGTCGAATAAACTTCCTTTGG
ATACCGAATCAACTGAACGAAACGAGATTCAAAAATTAGAAACAATTTTA
GAAACTTATTACGGTGCTATTGAGAATTCACCTTTGTCGAGATCGAAACT
ACCTTTGAAACATTCGATAAACCTTACTGATGACGCGCCAACAGTTTGTG
CACCCAGATCGATCCCTCACGCTCGAAAAGAGGCAGTAAACGAACAAATA
AAAACATTATTGGAAAATGGATGTATCGAGAGGTCATACAGTCCATATTC
AGCTCCGATAGTACCGGTTTTGAAACCTGATGGTTCGCTACGATTTTGCA
TTGACTATCGCAAATTGAATACCAAAACCATAAACAACAAATATCCGATC
GCTCGAAATGAAGACCTTTTAGACGGACTGAAAGGGTGTAAATATTTCTC
TGTTATTGATTTGAAAGCAGCTTATCATCACATCGCTATGGAGGAGACCG
ACAAATTGAAAACCGCCTTCGATTCACCGCAGGGAAAATTTCAATGGATA
GTTATGCCTTTCGGTTTGACTGGCGCAGCCTTTACCCTTTCTGCAAATCT
ATCTGAAGTTTTGAAAGATTGTTACGAATTCTTCAAGAAAAAGAAGTGTT
TTAATTGTCAGAAAACTGGGCATATTTCGAAATTCTGCCCAGAAATCAAA
TCTGAGACAGGGGCGATTAGAGATGATGTCAAGCCTGCTCCGCGTACTAT
TATCAAGATAAACACTTGTGGAAAGACAGTTGACTTTTTGTACGATACGG
GTTCACAGGTCACCATCATGAAACGACAAGACTTCGAGAACTTACCAAAT
AAACCACCACTCCAAAAAGTCGAACGCTCAGGTACCGCAGTCGACGGCAC
ACCGTTCAAATTTGATGGTATTGCTTATTTGAATCTATCGTTCCCATCAA
GTGACAGTAATAGACATAGACAATACACATTAGAGTATGAACCCATTCTC
ATTTCATCTAACGTTGAATCGAATATTTATGGTGCTCAGACGGAGGAGAA
ATTTAGAAAATGTGAAAGAGACATTGAAAACTCTACACTTAGTTACACGA
CGAAAGAGAATGAAAAAGTTACAGTACAATGTTATCGGGAGAAAATTTCG
TCAGTCACAGCTTACGTCAAAGTCGCTAAAGTTGCTTATCTACCACCCAA
CCATACCATGATGATCAAAGGTCGAATCAATTCACCGAAAACAATCACTG
GGACAAGCTTTTTATGTGAAAATGAAGAGTTACCAAATTGCTTGAACGTA
AACGAACTAACTTTCGAAAACGTTGAAAGAAACATCACCATACCGATAAC
CAACCATTCTGAAGTCCAACAGAAACTGAAAAAGGGACAAATTGTTGCAG
AAATTCGAGAAATAGAAAGTTGTCCAGAAGAGAGTAAAATCCAAGTAAAT
GCTACGGATGCGTCGAATAAACTTCCTTTGGATACCGAATCAACTGAACG
AAACGAGATTCAAAAATTAGAAACAATTTTAGAAACTTATTACGGTGCTA
TTGAGAATTCACCTTTGTCGAGATCGAAACTACCTTTGAAACATTCGATA
AACCTTACTGATGACGCGCCAACAGTTTGTGCACCCAGATCGATCCCTCA
CGCTCGAAAAGAGGCAGTAAACGAACAAATAAAAACATTATTGGAAAATG
GATGTATCGAGAGGTCATACAGTCCATATTCAGCTCCGATAGTACCGGTT
TTGAAACCTGATGGTTCGCTACGATTTTGCATTGACTATCGCAAATTGAA
TACCAAAACCATAAACAACAAATATCCGATCGCTCGAAATGAAGACCTTT
TAGACGGACTGAAAGGGTGTAAATATTTCTCTGTTATTGATTTGAAAGCA
GCTTATCATCACATCGCTATGGAGGAGACCGACAAATTGAAAACCGCCTT
CGATTCACCGCAGGGAAAATTTCAATGGATAGTTATGCCTTTCGGTTTGA
CTGGCGCAGCCTTTACCCTTTCTGCAAATCTATCTGAAGTTTTGAAAGAT
TGTTACGAATTCGGGATGGTTGCTTTCTTCAGGAAATTCATTCCAGATTT
TTCCCATTATGCTGCAGATTTATTTTCACTATTGAAAAAAGGAACTCGTT
TTCAATGGACAGAAAAACACGCTACAAGTTTCAATGAGATCAAAAGACTT
TTATCTGAAAATGTTCTTTTGCTCCACCCAGATTATACAAAGCCATTCGT
TTTGTTTACAGATGCTTCAAATGTGGCTGTGGGGTTTACCCTGACACAAG
AGAACGAAGGAACCTTTTGTCCAATTTTATACGTAGGTCGTTCTTTATCT
ATTTGTGAAATGAACTATTGTACTACTGACAAAGAACTTTTGGGGCTCTA
TTATTCAGTTAAAAAGAGCGAATTTTACATAACAGATCAAATTGTTATTG
TTTATACCGACCATAAACCGCTGACCTATCTATCCACGTTTCGTGATATT
GTAAATAAAAGATACCGCTGGATAGAATATATTGAGAACATAGGAATTAT
TATTCGTTACATTGAAGGAAAAGACAACGTCATAGGTGATTATATCAGCA
GAAATTTAAAAACAGACATTAAAACTGAAAAACGTTGGAGAGGGATGGTT
GCTTTCTTCAGGAAATTCATTCCAGATTTTTCCCATTATGCTGCAGATTT
ATTTTCACTATTGAAAAAAGGAACTCGTTTTCAATGGACAGAAAAACACG
CTACAAGTTTCAATGAGATCAAAAGACTTTTATCTGAAAATGTTCTTTTG
CTCCACCCAGATTATACAAAGCCATTCGTTTTGTTTACAGATGCTTCAAA
TGTGGCTGTGGGGTTTACCCTGACACAAGAGAACGAAGGAACCTTTTGTC
CAATTTTATACGTAGGTCGTTCTTTATCTATTTGTGAAATGAACTATTGT
ACTACTGACAAAGAACTTTTGGGGCTCTATTATTCAGTTAAAAAGAGCGA
ATTTTACATAACAGATCAAATTGTTATTGTTTATACCGACCATAAACCGC
TGACCTATCTATCCACGTTTCGTGATATTGTAAATAAAAGATACCGCTGG
ATAGAATATATTGAGAACATAGGAATTATTATTCGTTACATTGAAGGAAA
AGACAACGTCATAGGTGATTATATCAGCAGAAATTTAAAAACAGACATTA
AAACTGAAAAACGTTGGAGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000336_pilon | genome | sc0000336_pilon:7064..9331 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1432-2010:580 |
| Aaloc | 1-1431:2269 |
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