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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:1386134..1388211+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026176 ID=XLOC_026176|Name=XLOC_026176|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2078bp|location=Sequence derived from alignment at sc0000067_pilon:1386134..1388211+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCtctatcaaaaaataataagtgacAGCATCACTGATCTCCAATCTCA
GACCCCTCCACTTATACTATGTGAAAGGAAATTGCTGACTTTATCTAGTC
ATGTTGGGTGTACGGATGGTATTCTGTATGCAATGCCTTTGATAGCAGAA
ATTAATGGTGAAAGACATTTATACATTAGGTAAATTTcgtttcaaaatct
ttgatgaCGCTTTCGGTGAATCGAATTGGGTAACCTGCTTCTCTAAACAG
AACAAGCATCCCACACACTGGTCTTCTAAGATACCTAAAAGGTATAAACG
TAATACGATTAATGGTGACCTAAATCGATCATATAGAATCAGTAACAATT
ATAATAAAGAAAAGGAAATTATCAGAGAAAAGTTTAGAGAAACATTAGGT
AAAGAATTTGGCTTCTACTTTAAGTGTTCGCTCTAGAATTATTTCAATCT
CTCTTTTCCCATGACACTTTGTATCAACAACTGCTTAAAAtcgaaatgtt
ttattttttaaacttattgattttatttgtttgcattaaatttcaggtgt
tttgAGTCGGGTGTGTACAAAGGCTACTTTGATCAAACTGAAATGTTTGG
TGAACTCATGGATCAGTATGAAATCACCAAGAAGTTTGTCATCAGGATAT
ACACAGAGTGGGATGTTCTTGCTGTTTATCACACTGAACGAAACAAACAT
AAAAAGggtaaataattttgaaatttagtcTTTTTTACCAATAGTTGTAT
TTTTGTTATTACTGaactgaatttttgaaattgttgcCCAAACTATATTc
tattatatacttttttattcAGGGACTAAGCATTCAACAACATTTAAAAG
GCTCACAACACTCGATAAACATTCAATCGATAAAACCATTAAATCAGCAC
ACGACTCTTTAAAGGAAACATTTAAAAGTTTTGCACCtggttttgtattt
tattgcCGTAGAGACATGTCTCATACAAATCGAAATACTGATCCCAAAGA
TAACCAGTAAGATAATACTTTTCTTTGGTTCTCTACTGTCTTTTCTATTT
GAAGAGAGTATTTTTAGAAACTAAGATTATGTACAAATTCGCCTCTGTGA
AATATTCCACTTTTACATTACAGCTGTTCTTCGAACTCGAACTCGGAAAT
CTAATTTgttgaattacagagagtttTTTAAGAGACCTAGAAAATTCAAT
AGTATCAGGGATAGAAAGAATTAGGGAAAGTCTAGTTCgctaaaagaaat
tttattttatttcttatttttcacagattttaCTTGATTGAGGGTCTTGG
TGCATCCGAACTCTGGTTTAGAAACTTTCAAGATTATGGAACCGAACATC
CAAACGACCCATATCCAACCGTTCTTGAACAGTTCAaaggaaaagaagaa
ctttCACTGATCGAGCAATTCCAAGTTTTATCCCATGTCCCGAATCTTCA
TTCTTGGGCTTCTGAATCAAAAAGTGGAAcgaaaaaacaacaatattttg
cttcaaatgGTTACTCCCCTCGAGATATCATCTTACGTGCTCTAGATGAC
ATTCATTCTGACATGGAAGAAAAAGTCTCATCTATAACACCTATCTACTC
GCTGATTTTATCCAAACAATACCATGTCCCGAAAGTGTCTATCCACAAAC
AAAATGTAAGTGTTAAACTTTTCACGTTATATGATTGATAAGATCCATTC
ATTTTCTAGTCTTCGGAAGAcaaatcataaaaattgatataattACTACA
AATAAGAAATGAAattatgatgattttttgcGATAAATCATTAATCTCGA
TAtcctaaatattttaaatttagaaacGGCGTACTTGCAATCAAACTCAC
CGGCGAAAAGTATTGGACAAGACGGCTTTGCTAGAGCATCTTGACCACCC
TAATTTTGTTCAACCTGTGTATGAAAAGTTGGATGTTTACCCAAATTTTC
GATACAATATTTTCAATCACGGGACGATCGTTTGGCGTGAACTATCACAA
AACCAACATGTTGTGGTTATGAATGATTACGACTCCGATAATATTAACGG
GAACGTCAAGGTTGGTATAAACCATTAA Coding sequence (CDS) from alignment at sc0000067_pilon:1386134..1388211+ >XLOC_026176 ID=XLOC_026176|Name=XLOC_026176|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000067_pilon:1386134..1388211+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCtctatcaaaaaataataagtgacAGCATCACTGATCTCCAATCTCA
GACCCCTCCACTTATACTATGTGAAAGGAAATTGCTGACTTTATCTAGTC
ATGTTGGGTGTACGGATGGTATTCTGTATGCAATGCCTTTGATAGCAGAA
ATTAATGGTGAAAGACATTTATACATTAGATGCtctatcaaaaaataata
agtgacAGCATCACTGATCTCCAATCTCAGACCCCTCCACTTATACTATG
TGAAAGGAAATTGCTGACTTTATCTAGTCATGTTGGGTGTACGGATGGTA
TTCTGTATGCAATGCCTTTGATAGCAGAAATTAATGGTGAAAGACATTTA
TACATTAGgtgttttgAGTCGGGTGTGTACAAAGGCTACTTTGATCAAAC
TGAAATGTTTGGTGAACTCATGGATCAGTATGAAATCACCAAGAAGTTTG
TCATCAGGATATACACAGAGTGGGATGTTCTTGCTGTTTATCACACTGAA
CGAAACAAACATAAAAAGggtgttttgAGTCGGGTGTGTACAAAGGCTAC
TTTGATCAAACTGAAATGTTTGGTGAACTCATGGATCAGTATGAAATCAC
CAAGAAGTTTGTCATCAGGATATACACAGAGTGGGATGTTCTTGCTGTTT
ATCACACTGAACGAAACAAACATAAAAAGgGGACTAAGCATTCAACAACA
TTTAAAAGGCTCACAACACTCGATAAACATTCAATCGATAAAACCATTAA
ATCAGCACACGACTCTTTAAAGGAAACATTTAAAAGTTTTGCACCtggtt
ttgtattttattgcCGTAGAGACATGTCTCATACAAATCGAAATACTGAT
CCCAAAGATAACCAGGACTAAGCATTCAACAACATTTAAAAGGCTCACAA
CACTCGATAAACATTCAATCGATAAAACCATTAAATCAGCACACGACTCT
TTAAAGGAAACATTTAAAAGTTTTGCACCtggttttgtattttattgcCG
TAGAGACATGTCTCATACAAATCGAAATACTGATCCCAAAGATAACCAat
tttaCTTGATTGAGGGTCTTGGTGCATCCGAACTCTGGTTTAGAAACTTT
CAAGATTATGGAACCGAACATCCAAACGACCCATATCCAACCGTTCTTGA
ACAGTTCAaaggaaaagaagaactttCACTGATCGAGCAATTCCAAGTTT
TATCCCATGTCCCGAATCTTCATTCTTGGGCTTCTGAATCAAAAAGTGGA
AcgaaaaaacaacaatattttgcttcaaatgGTTACTCCCCTCGAGATAT
CATCTTACGTGCTCTAGATGACATTCATTCTGACATGGAAGAAAAAGTCT
CATCTATAACACCTATCTACTCGCTGATTTTATCCAAACAATACCATGTC
CCGAAAGTGTCTATCCACAAACAAAATattttaCTTGATTGAGGGTCTTG
GTGCATCCGAACTCTGGTTTAGAAACTTTCAAGATTATGGAACCGAACAT
CCAAACGACCCATATCCAACCGTTCTTGAACAGTTCAaaggaaaagaaga
actttCACTGATCGAGCAATTCCAAGTTTTATCCCATGTCCCGAATCTTC
ATTCTTGGGCTTCTGAATCAAAAAGTGGAAcgaaaaaacaacaatatttt
gcttcaaatgGTTACTCCCCTCGAGATATCATCTTACGTGCTCTAGATGA
CATTCATTCTGACATGGAAGAAAAAGTCTCATCTATAACACCTATCTACT
CGCTGATTTTATCCAAACAATACCATGTCCCGAAAGTGTCTATCCACAAA
CAAAATaaacGGCGTACTTGCAATCAAACTCACCGGCGAAAAGTATTGGA
CAAGACGGCTTTGCTAGAGCATCTTGACCACCCTAATTTTGTTCAACCTG
TGTATGAAAAGTTGGATGTTTACCCAAATTTTCGATACAATATTTTCAAT
CACGGGACGATCGTTTGGCGTGAACTATCACAAAACCAACATGTTGTGGT
TATGAATGATTACGACTCCGATAATATTAACGGGAACGTCAAGGTTGGTA
TAAACCATTAAaaacGGCGTACTTGCAATCAAACTCACCGGCGAAAAGTA
TTGGACAAGACGGCTTTGCTAGAGCATCTTGACCACCCTAATTTTGTTCA
ACCTGTGTATGAAAAGTTGGATGTTTACCCAAATTTTCGATACAATATTT
TCAATCACGGGACGATCGTTTGGCGTGAACTATCACAAAACCAACATGTT
GTGGTTATGAATGATTACGACTCCGATAATATTAACGGGAACGTCAAGGT
TGGTATAAACCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:1386134..1388211 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 904-1158:1824 |
| Aaloc | 526-903:1278 |
| Aaloc | 343-522:825 |
| Aaloc | 181-339:548 |
| Aaloc | 1-177:1 |
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