XLOC_026147.2 (mRNA) -

Overview
NameXLOC_026147.2
Unique NameXLOC_026147.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000263_pilon:489639..490936+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026147.2 ID=XLOC_026147.2|Name=XLOC_026147.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1298bp|location=Sequence derived from alignment at sc0000263_pilon:489639..490936+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCAAGGAAAGCACATCAAAACATTGGATTCAAAACTGCCACAAC ATTGAGACCGTCCATCcaacaggtttacaacgaagaagaacaacaacgga aacaagatattctcaacagaaaacaacaacaacaaagtaCTCAGAAATTT CTTCTTCGGGATCACCTAGTTCTTCACGAAACGGTTGATCAACAAGACTA CCAACGGTTGGCAAAGTTGATGCCTTTGGTGAAGAATAGAACTTATAACA TCAATGCGCCTGATGAAGATTGGTGTTGCAGAAGCCCCTTACATGTTGCA TGTTCTAATGGTATGTTAACGGTTTGGAATCAACCATGAAAATCTGTATT CGGTTTTACTCTTTACTCTTACTagcacacgtttttttataagaacataa ggcttcgatggccaaaatgttaagaacattttaaggctttgcagactcta aaccacccaatttcttaggaaagtggacaaaaatactcaatggtgaaata aaaacatgttatgAACATTAtgaggcttaaaactcaaaaagttaagaaca tccgaaggcttcaaatattttggatgttcttataagaaaaatgtgtATTA CTTTTTGATAATCTTACATCCGTGAGATGGTTTCAAGGTTATCACGTGGC CTTCGAATTATTTAAGCAGCAcagatactctcgggtacttaatagccgtc ccccccccgctaattaatttttcgaaaattttccacccaggacattctta ttccaacccccccgcttataaatttttgggaaaatgtttttgaaagttcc cgtttttgtcctaattcagctgtattaacctccttttcaaaaaatttcca cccaggacatttttattccaacccccccgcttattccaaaccccccccgg ctattaggtacccgagagtaggcaGATAGACGTTTATTCGAAGGTAAATT TAGTGTcctatgaaaaaattaaaatccgaaaaaTTTTGCCTTTCAAATTT AAATCCCCACCAAATTGAATTCCTAAATTCAGTATTTTTGGTATTAttca aatctgttttttttcttccaggTAGCATACGATGTTGTCAAATTCTTTTA GAGCATGGTGCCTACCATTCAACTCTGACGTCGTCAGGTATCACACCTGC TCATTTCGCAGCAGAGAGAGGCTTTTTAGACATCCTACAACTGTTGTTTT ATTACGGAGCCAACTTACAAATGGAAGACTTTTCTAAGGAGAGACCTATT GACCTGGCAGAGAAATACAATCAAATTGAATGTGTGGAGTTcttaaaa

Coding sequence (CDS) from alignment at sc0000263_pilon:489639..490936+

>XLOC_026147.2 ID=XLOC_026147.2|Name=XLOC_026147.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1074bp|location=Sequence derived from alignment at sc0000263_pilon:489639..490936+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCAAGGAAAGCACATCAAAACATTGGATTCAAAACTGCCACAAC
ATTGAGACCGTCCATCcaacaggtttacaacgaagaagaacaacaacgga
aacaagatattctcaacagaaaacaacaacaacaaagtaCTCAGAAATTT
CTTCTTCGGGATCACCTAGTTCTTCACGAAACGGTTGATCAACAAGACTA
CCAACGGTTGGCAAAGTTGATGCCTTTGGTGAAGAATAGAACTTATAACA
TCAATGCGCCTGATGAAGATTGGTGTTGCAGAAGCCCCTTACATGTTGCA
TGTTCTAATGATGTCATCAAGGAAAGCACATCAAAACATTGGATTCAAAA
CTGCCACAACATTGAGACCGTCCATCcaacaggtttacaacgaagaagaa
caacaacggaaacaagatattctcaacagaaaacaacaacaacaaagtaC
TCAGAAATTTCTTCTTCGGGATCACCTAGTTCTTCACGAAACGGTTGATC
AACAAGACTACCAACGGTTGGCAAAGTTGATGCCTTTGGTGAAGAATAGA
ACTTATAACATCAATGCGCCTGATGAAGATTGGTGTTGCAGAAGCCCCTT
ACATGTTGCATGTTCTAATGgTAGCATACGATGTTGTCAAATTCTTTTAG
AGCATGGTGCCTACCATTCAACTCTGACGTCGTCAGGTATCACACCTGCT
CATTTCGCAGCAGAGAGAGGCTTTTTAGACATCCTACAACTGTTGTTTTA
TTACGGAGCCAACTTACAAATGGAAGACTTTTCTAAGGAGAGACCTATTG
ACCTGGCAGAGAAATACAATCAAATTGAATGTGTGGAGTTcttaaaagTA
GCATACGATGTTGTCAAATTCTTTTAGAGCATGGTGCCTACCATTCAACT
CTGACGTCGTCAGGTATCACACCTGCTCATTTCGCAGCAGAGAGAGGCTT
TTTAGACATCCTACAACTGTTGTTTTATTACGGAGCCAACTTACAAATGG
AAGACTTTTCTAAGGAGAGACCTATTGACCTGGCAGAGAAATACAATCAA
ATTGAATGTGTGGAGTTcttaaaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_026147.2XLOC_026147.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000263_pilongenomesc0000263_pilon:489639..490936 +
Properties
Property NameValue
Aaloc313-537:1074
Aaloc1-309:1