XLOC_026045 (mRNA) -

Overview
NameXLOC_026045
Unique NameXLOC_026045
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000367_pilon:61616..63973+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026045 ID=XLOC_026045|Name=XLOC_026045|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2358bp|location=Sequence derived from alignment at sc0000367_pilon:61616..63973+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTGGTAAATGTTTTACTCAACAAAGTAGTTTAAATGCACATCTTAAGAT TCACAATGATATCGAATCATTTAAATGTGAAGAATGTTGTAAATCTTTTC GAAGTAAATATCTTTTGAAGAATCATCTCAGAGAGCACACTGGGGAACCA CTTTCAAAGTGTCAGGAATGTGGTAAATGCTTCAAAACAAAAAGTTATTT AATAAAGCATAATAAAATACACACTGGAGAAAAACCATTCAagtgtcaag aatgtggtaaatgttttACTCAACAAAGTGGTTTAAATGCACATGTAAAG ATTCACACTGGCGTAAAACCTTTTAagtgtcaagaatgtggtaaatgttt tGCCAAACGAAGTGTTCTAACACAACATTTTATTGTACATAGCAGCATTA AGCCTTTCAaatgtgaagaatgtggtaatTGCTTTAAAACAAATGATTCT TTAAAGCAACATAAAAGAATACACACCAAAGAAAAGACATTCAAATGTGA AGAGTGTGGTAATTGCTTTAAAACAAATGATTCTTTAAAGCACCATAAAA GAATACACACCAAAGAAAAGCCATTCAAATGTGAAGAGTGTGGTGAttct tttttaaggaaaaaaattttaaaagttcacaTGAGAATACATACTGGaaa aaaaCCATTCAAGTGtaaagaatgtggtaaatgctTCTCTAAAGCCGATA GCTTAAATAGACATTTGTACTTGCATAGCGAAATCGAACCATTTAAATGT GCAGAAAGTGGTAAACAGTTTTCTCAACGTGTTAATTTGATACATCATTC AAACATACACAATGGAATCAAATCATTTAAAGGTAAGGAACGTGGTAAGT TCTTTTCCCGAAAAGATAGTTTGAATATTCACATGAAGACTCATAAACGA AAAGAACATGATCAAATTGTAGAACAAGAAAATGACTTCCGATGTAACAA ATGTGATGAATGTTTTAACAGTTTAAGTCATTTGACTGCTCATGCTAAAA GCCACTCCGAAAGAATAGTTCTGTCGGATGGAAAAAGTGAATCCAAAGAT TCGTCAACTAAAAAACATCAAGATCTAAATTTATTGGATGTTGCCAGTCT CATTGTTGAGAACGAAGAGAGGAGGAAAAGGACAATCaattatttgaaat attaaatATGTATTATGTTTAGTtcatttttggttaaaaattgtTTAGTT GAAACAAAGTTTTTTAATGAGCGATTGTTCATTTCTGAGGTTAAGTGcaa tcttcaggcaatgcaGCGTTTTGTAGATTGTTACTTCAAATGAAATCTTC AATACACTACTTTGCATGAAGATTTAACAAGCATGAAAAATCGCAATAGA AATTATAAATgagttctttttttctaaatatttggCTCAATTTCTCCGAA TTTTCTTTTGCACTTTGTGAGTCTTTTTATTTAATGTAATTCCCTACTAA ATAGTTGAAAATCTTTTAGACAAATTGTCTTTAAAATACAATACctttga aattaaattcaagAGCACGTATTTAGCTTTACACGGAGGATTGAGAATTA TGCTGTCAAAAGGGTTTCATAAGATTAATGTTAATAGATTAAGATAATTA ATTgcaatttcgtttttttctttttacaggaaaaataaagataacaaaac aaactatatgcaatgaataaagaaatcaaagacgtacaaaaatTGAATTC TGTTTCCATCAAGATTGGTCCGGAGGAtgcttttttagattttttgggAG AGGAAAAGCATGAATTTGTTGATACAAACATATATGATGATATACCATTG AAGATAAAGATTGAAGAGGAGAATAATTCTTTTGCCTCTGTCGAAGAGGT ATCCGATTCTCAGCATCAATCAGACTCTTTTGATATTAAAATTGAACTCG ATGAAATACTTCCACCAACGAACTTAACAACACATGCCACTAATTTACAA GTAGAAAATCCTATAACCAAGACAAGGAAAAATAGTCTTGTCACAAAAGA ACGtggcaaaagttttatttgcaAAGATTGTGGTAAATCCTTCAAATTCA ACTGTGATTTGAAGAGACATTTTAGAATTCACACTGGCGAAAGACCTTTC AAGTGTCAAGAATGTGGCAAATGTTTTACTcaagaaagtagttttaatgc ACATCTTAAGATTCACAGTGATATCGAATCATTTAAATGTGAggaatgtg gtaaatcttttcGAAGTAAATATCTTTTAAAGAATCATCTCAGAGAGCAT ACTGGGGAACCACTTTCAAGGTGTCAGGAATGTGGTAAatacttcaaaac aaaaaattatttaataaaccaTAATAGAAGACACACTGGAGAAAAACCAT TTAagtgt

Coding sequence (CDS) from alignment at sc0000367_pilon:61616..63973+

>XLOC_026045 ID=XLOC_026045|Name=XLOC_026045|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=660bp|location=Sequence derived from alignment at sc0000367_pilon:61616..63973+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTGGTAAATGTTTTACTCAACAAAGTAGTTTAAATGCACATCTTAAGAT
TCACAATGTGTGGTAAATGTTTTACTCAACAAAGTAGTTTAAATGCACAT
CTTAAGATTCACAATGGCGAAAGACCTTTCAAGTGTCAAGAATGTGGCAA
ATGTTTTACTcaagaaagtagttttaatgcACATCTTAAGATTCACAGTG
ATATCGAATCATTTAAATGTGAggaatgtggtaaatcttttcGAAGTAAA
TATCTTTTAAAGAATCATCTCAGAGAGCATACTGGGGAACCACTTTCAAG
GTGTCAGGAATGTGGTAAatacttcaaaacaaaaaattatttaataaacc
aTAATAGAAGACACACTGGAGAAAAACCATTTAagtgtGCGAAAGACCTT
TCAAGTGTCAAGAATGTGGCAAATGTTTTACTcaagaaagtagttttaat
gcACATCTTAAGATTCACAGTGATATCGAATCATTTAAATGTGAggaatg
tggtaaatcttttcGAAGTAAATATCTTTTAAAGAATCATCTCAGAGAGC
ATACTGGGGAACCACTTTCAAGGTGTCAGGAATGTGGTAAatacttcaaa
acaaaaaattatttaataaaccaTAATAGAAGACACACTGGAGAAAAACC
ATTTAagtgt
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_026045XLOC_026045-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000367_pilongenomesc0000367_pilon:61616..63973 +
Properties
Property NameValue
Aaloc61-330:2089
Aaloc1-57:1