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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:1016177..1019011- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026028 ID=XLOC_026028|Name=XLOC_026028|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2835bp|location=Sequence derived from alignment at sc0000067_pilon:1016177..1019011- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCTATTACAAAGGCATTACAAAAAGCTCCAAGAACTTCTACAGGTAAA
ATAATTTTTTTCGTCGGTTTTGAACTATTAAGTGCAGCATACGACGTCGT
TCAATTTTTCTTCCCTATACTAGTACAATCATGGACAAAAGGTTGTAGAC
AAATGAAATTTCAGTGAAAAATCATGAGAAATAAAGCAAAATGACTCTTC
AATGTGTCTGAAAGGGGAGGGAAGTTAAGAAAAACACTTTTGAAGTGCTT
TCGAAATCAAAGAATAGTTGAAAATTTTAAGTTCCAAAGTAATGGCAGGC
AATGGGTTTTTAATGATAACTGTCTTGTTTAAAAGTTATTTCAGCTTTAC
CGTGTGTCTTTGAAGTCATTGATCGAAATTGAATGCGGAGAATTTTTCTT
AAAAAATGAAAGCAACAGATTATCTTTAGACGTACTAATTTCCGCGAAGT
CGAAAAATTGCAAAATTGCGAAATTTACTTTCGCGAATTTAACGCGAATT
TGCTCGCGAAAGTTTGTACGCCTTAAGTATCTTAAAAATAAGGAGAAGCA
CTTTGGTAAAAAATGCGCCATCCTCAATGCTTTTATACGAGATATAAATA
ATATTTTTTTGCAATCACTAGACCTTTACAGGCACGACGGAAGATTTCTA
TATCTGGTACAGCGAATGAGAAAATTTAAGCGATTTTATAGCAATTTTAC
CGACGAAGAAGAGAATTTCGGGGCTTTTTGTGAAAATCTGGTACGGCGGC
TGCCATAACTGTCGTACCGGTTGCGTCGTGTCTGCTTTACTACCCATCTC
GTCCACACTATAATAAACAATTTCCTTTTACTCTAGATTGTGTTCGATTT
CTTCCACGGAGATGGGAATGGCTTATCTGTGGAGGCTTTACAAGGAGCTC
TGCATCAGGTAATCATTATTCTTCTGTTCCACTCGTATTTATATTTACAC
TTGATTTGGGCTGACTGGCTTCTCGTTGTCATACAACGGAGCCTCTTTAA
CTCGAACCTCTATAACTCGAATCTCTCAATAACTCGAACAACTTTTATGA
CCCCTTCAACAGTTAACAGTCCCTTATAAACCTTACTCCATAACTTGAAA
TTTCCTTAACTCGAACAGAATTTATGTTTCCCGTATCTGTTCGAATTATG
GAGACTCGACTTTATAAATTTTAAAATTTAAATTGGCTCTGATTTCATTG
AGCACTCTGCAGCATCAATCACAAACAAATCGACGAGATGGAGTTTTTAC
AAGCTCTTATTTGATTTGGTTGGTCGTTAACCAGTAATAAAAATTTTTTT
TTACTTTTTCTAAAGAACGCGTCATTTTTATTACATCAAATGACCAATTA
TTATAGTATCTTATAAAAACTCCATCTCATCTGAAATCGACTCGACTGTT
TATAAATCCTTTAACAATTGTAACATGTTGTTTGAAAGAGTTTTTTTCCC
ACATATTATACATACAGTTGAGTCTCCGAAAACGCACGGGGAAACAAATC
TGTTCGAGTTAAGGAAATTTTGAGTTATAGAGTAAGGTTTATAAGACATT
GTTAGCTGAAGGGACCAGAAAACTTGTTCGAGCTCAGGAGACATTCGAGT
TGTAGAGGTTCGAGTTGAAGAGACTCAACTGTAATATTGAAGTTGACCCT
CTACGCTGCTACTTATCCCTCACGATAAGATTAAGATAAATATTTTTGAT
ATTTCTTTTCTTTAGGAACTGACGTATTGTTTACAGTTGAATAGCTCATC
CACAGAAGAACTGATCGAAAACTATTTTGTTGACCAATGTGAACAACAGG
TTCGTTGAAAATTTTCACACTAGTTGTGAAGATGTTATCGAGTACACGTT
TTTTTATAAGAACGTACAAAATTTTTGACGCCTTTGGATGTTCTTAAAAC
TTTATGAGTTTAAGCCTTATAATGTTCTTAATATGTTCTTATTTTCCCCA
TTTTTGGAATGTTTTTGATTTCAAATTTGTTTGAGAACACTACTGGCAAC
CGTCCACAAATCTATAAAGCCCGAAGGGCTAGATGGCGTGCTTTGCCTTT
TTGGTAAGAAATCCCACTCAGGTCACGTGACATTACAATAGAATTTCAAC
GCTTGACTAATCAGAAGTTTCGCAGATTTTCAAAAACAAAAGCAACAACA
TGTTTTGCGAAATTCACTTGTTTTTGCTTGGAAAAGCTTAAAGCACTCCA
TCTAGCCCTTCCGTCACCTTTCTATTCTAATAACCTAATTATTGTTTAAA
TTGAATTAGATTCTCAACATCTTAGCAACCTAACAATGACATCTCGACAA
TTTTTAGATACAGTTGGCGCTCTCTAATTCCATTTTTGAGGGGAATAGGA
TTTTCATCGAATAAGGGAGCGTGTCGTATAGCAGAACGTCGATTTAGAGA
GTGTCAATTGTAGCTTATTTGTCTTGTCTTTCCTCGACAGGAGTTGTGCT
TTTCTATCTTCCTGTCAACTCTGTTGTTTCTACGCTTCACTTTTATGGTT
TAGAAAGCCGCTGATTCCAGTTTGGGGAAGACTGCTTTCAAAGTTTTCTT
TGATAATTTAACAAAGAAATTGAATGTCTATGGTAAGAATTTCTATTGAG
AAGCCTGCAATTTTTCGAGCTGAAAAAGTTTTCTTATGAACATTTTCAAT
GCGTTCACAGTCCATCTTCTGAATCGACAAAACGTTGAAAAATAAGTTTT
TAAGAAAAATATGTGTTAATTCTATCTTCGGGTTCATTGTGATCACACTG
TAAGTCTTTTAACATTTGAAAATAATTTCTCATTTCTTTTCTAGTATTAA
ATGCAGCAAATATTCTTCCGCTGGATAGCTCAGGT Coding sequence (CDS) from alignment at sc0000067_pilon:1016177..1019011- >XLOC_026028 ID=XLOC_026028|Name=XLOC_026028|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=642bp|location=Sequence derived from alignment at sc0000067_pilon:1016177..1019011- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCTATTACAAAGGCATTACAAAAAGCTCCAAGAACTTCTACAGCAGCT
ATTACAAAGGCATTACAAAAAGCTCCAAGAACTTCTACAGATTGTGTTCG
ATTTCTTCCACGGAGATGGGAATGGCTTATCTGTGGAGGCTTTACAAGGA
GCTCTGCATCAGATTGTGTTCGATTTCTTCCACGGAGATGGGAATGGCTT
ATCTGTGGAGGCTTTACAAGGAGCTCTGCATCAGGAACTGACGTATTGTT
TACAGTTGAATAGCTCATCCACAGAAGAACTGATCGAAAACTATTTTGTT
GACCAATGTGAACAACAGGAACTGACGTATTGTTTACAGTTGAATAGCTC
ATCCACAGAAGAACTGATCGAAAACTATTTTGTTGACCAATGTGAACAAC
AGAAAGCCGCTGATTCCAGTTTGGGGAAGACTGCTTTCAAAGTTTTCTTT
GATAATTTAACAAAGAAATTGAATGTCTATGAAAGCCGCTGATTCCAGTT
TGGGGAAGACTGCTTTCAAAGTTTTCTTTGATAATTTAACAAAGAAATTG
AATGTCTATGTATTAAATGCAGCAAATATTCTTCCGCTGGATAGCTCAGG
TTATTAAATGCAGCAAATATTCTTCCGCTGGATAGCTCAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:1016177..1019011 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 283-321:40 |
| Aaloc | 202-279:333 |
| Aaloc | 118-201:1121 |
| Aaloc | 46-117:2000 |
| Aaloc | 1-45:2836 |
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