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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:183809..186816+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025999 ID=XLOC_025999|Name=XLOC_025999|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3008bp|location=Sequence derived from alignment at sc0000159_pilon:183809..186816+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGTGAGAACGGCAAGTCCCGTTAAAACACCAATTACTGCTCCTACATC
AACAGAGACCAATGCTGCCAAGACCATCAAGGTTCGTATTTTATgagaaa
ttcatgatatgcaccactgcaatggcttcacgaaattatgcaacaaAAAT
TATCCACccttccacccaatacgtcacttgaaaaatgggtggaaaatttt
aaaagttctcagaagactctccagtggtgcatgtCATGAATAAGTAATTC
AAAGAACTGTGATTTCGAATAATAGTCAAATTAAATTCTGAAATAACGCT
GCCTCCTTAAGATTGTTACCAATATAGTCCATAGTGATCCACAGTGTGTC
CAGAAAAAGGCATGAACAGCATTTATACAAATAAAAATCCTCAGATCTTA
CATAAACTTGACCTAAGGTTCTCGATCTCTTTTTCGAGATCCCAATTTAA
TATAATCTTGGGAATTCAATGTTCAATATATTTATTGCACAACAAAGACA
TTATATCCATTCTAACCTCCAGTGGTTTAGTCAgttttatattatataaa
atCTACCCCGCTTTATTTTGGGCACACTGTACATTTGCAAGCCATTGTTG
AATAAGTTCCACTTCCACCTAAAGCAAAACCTTCTAAGGGCTTTCTAgct
ataaattttatttttcatttctacaGTTAACACGACCAACAGTCACAGCA
CCCACCAAAGTTGCTAACGCTCCTACCACTGAGAACGCAAGCGGGGTCTC
TGTTCGCTCTTTTGAAGAAATcatgaaagaaaaaagtctaCGTAAACAAC
GTGAAATGCAGGGACAACAAAACAAGGTCGAAGCTAAACCTATACAGAGT
TTCCTACGACGTCGTTCTCTATCCAATCAACGCAATCAAACACAACCTGG
AATCACCACTACAGTTAGTAACGACAGTACCAAAAGCACTGAGAAAACTG
TTCCAGCTACGACAGCCGTGATTGCAGAAACCGAAACAGCAAAAGAAACT
ACGACAATGGTTCTACCGCCGGTTGCGAAAATTATCGGTCGACGACGAAG
CTCCTCACCACTTCAACCAGGAGTCGAGGTCACTAAAGTTGCCCCCATCA
AAATCAAACGAAAACTCTCCTCATCGTCCAGCTCGGACCTGGCGAAATCA
AGAACACAAACGCCTCCACCACAAGTTGTTCCTACAATACCCGCAAAATC
TGACGACGTTTTCGATACACTGAAAGACGTCAGGGCAAACAACGAATCAT
CGACGAACGGAGCATCTCCGATTGCGGAAGAGACAGAACCACTTTCACAA
GCTTCAATGGAAGACATACAGGAAGCACTGTAAGTAAAACTTCTGTATAA
ACCAGGGAAAGTGTGCATCAATTGTGCGTTTTTgactagaaagcatgaaa
tttggtacagtggtacctcagggggtaagaaacattttaagcctctgGCC
CACTTCCGGAACAcctttttgtgtattttacagaccagaatgctTCCCAG
Gcaaatttttatcttcaaagcatttcatatgatattttgttggaaaggtt
ttctaacagttgattctaaaaaacatcacaacatatatctgaaaatggac
tgggtccgagttatgagctacggaagtaatttacagaccagtctgcatac
ccgaaaaaaaaatttatttttgttccaaagCATGTCttatcatataccgt
tggaaaggttttttcacactgattctaaaaatcataatggtatgtatctc
aaaatggactgggtccgagttataGGCCATgggagtattttacagaccag
aatggctCCTGGCCCAAAACTCGGACCTCGTCCTTTTTAAGATacatgtt
gtgatgttttttagaacCAGTCTGAAAAAACCTTTCAAACGGTATATAAC
ACGACATGttttggagataaaaatattttttgtatgccCGGGAgccgttc
tggtctgtaaattactcctATGGCTTATTTcacggacccagtccattttg
aGATGCATATTATGatgatttttagaatcagtatgaaaaaacctttccaa
cggtatatgatatcACATATTTTggaacaaatataaacaaatttttcggg
catgcagactggtctgtaaattacttccgtagcccataactcggacccag
tccatttacagatatatgttgtgatgttttttagaatcagtgtgagaaaa
cctttccaacgatatatcatatgacatgctttgaagacaaaaaatctttt
tcttgcctgggaggcattctggtctgtaaaatacacaaacaggtgtttca
gaagtgggtcagaggcttaaaatgtttcttaccccctaaggtaccactgt
accaaatgtcatgctttctagtcaaaaatgcacaattgtattcattttta
gcacactttccctggactagtagtagaaaaatattcttctgtATATACAA
GATGGTGCTGACCGTTACACTTTTTTGCattccaaatttttttcccaaat
tctgTCTTTATCATCAGATTTGTAGAATTCCTacgcataacataagcata
tatgtcagcctggaatttttttcaagttttatctgttcaaaaaggtttgg
tagaggtcaagtaaaaaaagaaattccacggcaagctacattccactgct
cacaaaatctgaacaaatttttacaaaatttctgaaatttcactaaaaac
ttggctcagGGTGAAACATAAGCATAaacatataataagcataagcttTG
TCTGGATGCTTTAAGAAcctaagcatacacgagcctgaccaaggggcata
cgcttggctataaaaaaaacatttaatccaTATTTTTCCATTTAGAGATG
AGAAGCAACGTGAACGTGAGCAGGAGATGTTATCGGACGATGAATTCGAC
CGACTGAACGATCTCTTATCCGACGATGACGATGACGGTGACGAAGATGG
AGATGAAGTCAACGATGATGATTTCATGATGGAACTAGAACAAATGATCG
ATAGTTAA Coding sequence (CDS) from alignment at sc0000159_pilon:183809..186816+ >XLOC_025999 ID=XLOC_025999|Name=XLOC_025999|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1794bp|location=Sequence derived from alignment at sc0000159_pilon:183809..186816+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGTGAGAACGGCAAGTCCCGTTAAAACACCAATTACTGCTCCTACATC
AACAGAGACCAATGCTGCCAAGACCATCAAGGATGTGAGAACGGCAAGTC
CCGTTAAAACACCAATTACTGCTCCTACATCAACAGAGACCAATGCTGCC
AAGACCATCAAGTTAACACGACCAACAGTCACAGCACCCACCAAAGTTGC
TAACGCTCCTACCACTGAGAACGCAAGCGGGGTCTCTGTTCGCTCTTTTG
AAGAAATcatgaaagaaaaaagtctaCGTAAACAACGTGAAATGCAGGGA
CAACAAAACAAGGTCGAAGCTAAACCTATACAGAGTTTCCTACGACGTCG
TTCTCTATCCAATCAACGCAATCAAACACAACCTGGAATCACCACTACAG
TTAGTAACGACAGTACCAAAAGCACTGAGAAAACTGTTCCAGCTACGACA
GCCGTGATTGCAGAAACCGAAACAGCAAAAGAAACTACGACAATGGTTCT
ACCGCCGGTTGCGAAAATTATCGGTCGACGACGAAGCTCCTCACCACTTC
AACCAGGAGTCGAGGTCACTAAAGTTGCCCCCATCAAAATCAAACGAAAA
CTCTCCTCATCGTCCAGCTCGGACCTGGCGAAATCAAGAACACAAACGCC
TCCACCACAAGTTGTTCCTACAATACCCGCAAAATCTGACGACGTTTTCG
ATACACTGAAAGACGTCAGGGCAAACAACGAATCATCGACGAACGGAGCA
TCTCCGATTGCGGAAGAGACAGAACCACTTTCACAAGCTTCAATGGAAGA
CATACAGGAAGCACTTTAACACGACCAACAGTCACAGCACCCACCAAAGT
TGCTAACGCTCCTACCACTGAGAACGCAAGCGGGGTCTCTGTTCGCTCTT
TTGAAGAAATcatgaaagaaaaaagtctaCGTAAACAACGTGAAATGCAG
GGACAACAAAACAAGGTCGAAGCTAAACCTATACAGAGTTTCCTACGACG
TCGTTCTCTATCCAATCAACGCAATCAAACACAACCTGGAATCACCACTA
CAGTTAGTAACGACAGTACCAAAAGCACTGAGAAAACTGTTCCAGCTACG
ACAGCCGTGATTGCAGAAACCGAAACAGCAAAAGAAACTACGACAATGGT
TCTACCGCCGGTTGCGAAAATTATCGGTCGACGACGAAGCTCCTCACCAC
TTCAACCAGGAGTCGAGGTCACTAAAGTTGCCCCCATCAAAATCAAACGA
AAACTCTCCTCATCGTCCAGCTCGGACCTGGCGAAATCAAGAACACAAAC
GCCTCCACCACAAGTTGTTCCTACAATACCCGCAAAATCTGACGACGTTT
TCGATACACTGAAAGACGTCAGGGCAAACAACGAATCATCGACGAACGGA
GCATCTCCGATTGCGGAAGAGACAGAACCACTTTCACAAGCTTCAATGGA
AGACATACAGGAAGCACTAGATGAGAAGCAACGTGAACGTGAGCAGGAGA
TGTTATCGGACGATGAATTCGACCGACTGAACGATCTCTTATCCGACGAT
GACGATGACGGTGACGAAGATGGAGATGAAGTCAACGATGATGATTTCAT
GATGGAACTAGAACAAATGATCGATAGTTAAAGATGAGAAGCAACGTGAA
CGTGAGCAGGAGATGTTATCGGACGATGAATTCGACCGACTGAACGATCT
CTTATCCGACGATGACGATGACGGTGACGAAGATGGAGATGAAGTCAACG
ATGATGATTTCATGATGGAACTAGAACAAATGATCGATAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:183809..186816 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 736-897:2847 |
| Aaloc | 82-732:677 |
| Aaloc | 1-81:1 |
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