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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:420344..422969+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025948 ID=XLOC_025948|Name=XLOC_025948|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2626bp|location=Sequence derived from alignment at sc0000159_pilon:420344..422969+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAATAGAAGCTGGTCGACTATGTTCCGAGGGGAGCTCAGGACGTCCATG
TCCCGAGGGAAGCATATGTAAAAGATACTGGGATGGTCCTAATTTTGGTG
TGACAAATTTCGATAATATTTTCAGTGCATGTCTGACTGTCTTTACGTGT
ATCACATGTGAAGGGTGGACAGATACTATGTATTGGGTGAGATCGCTTTC
TTTATCATTCTTATAAGTATTGATGACTAAGAACTTGTCAAATAGAACAA
AAATAAGTCCGAAAAAAGACATCTTGGCTCCTTGATACTCAGATATAGAC
ACAATGCAATACATAGAAGCGCCAAAACAGGGTCTTAGAACACACTTACA
AAGATAAGTTTATTTAAGGGATGTTAATTTCATGGTTTCGTCTGCCGCCG
CAACATAATGATGATGGttttttttGGGAAGGCGCTAATTTCCCCCTTGC
CGGTTGCCATTTTTTATAAACAGTCCAATCTCCTCTTAGAAACAATGTTT
ACGCTTCTGCAACCCTGGGCTAAGAAAATTGCTAATATTAATGTGAAATT
ATTTCGTGCTTCAAAGCCGAGCTGTTTCCTGATCTTGTAAAAGTGGGGGT
TAGTTAATAGGTGTATTCTTTTTCTTCGCAGACGATGGATGTTATGGATT
ATGATGGATATTATATGTTTTCGATTTATTGGCTTTTGAATGTCATTGGT
GCTCAATTCATGTTGAATTTAGTCTGTGGTGTCCTCAGCGGGTaagtttg
ttgattttttaataCGGTCATTTCCAACTGGACGCAATGCTTTTGGTTTA
TTTCAGCTTAAGACCACGTTCACACACTACGTTCTGTTTCGCTCCAAAAC
ACTGTCTGAACGTCAAAATtggaaacgtcaaaaagaagacgtgtacaaag
caaaacagattgaAACGGTCTCGCTTGCACTATTTTAATAAGAACGGAAA
TgttccgttttcttgctccaaaaCTTCCGAAAATGAGTATGAACACTTCT
TATCCGTAACAAATACCACACTGgagcgatacgaaaccgtaacgtctaaA
CATAGTGTCTCTCTAAGATTCGTCTGTTCgtgatatgcatcactgcagTA
TCTTCTACATCACACcatagacccaacagctgattggttgtaaatggcgt
aaaatcagtcaatacgtcacttacaaccaatcagctgatGGCTTCgttat
gtaatgttagaagCTTAATGTTATAGTGCATATCATGgatacacgaatat
tactaggcaagtgtTCAACGGCCCTGAAATTAAcacacaaaaaattaaca
cgaattttattttatttttcaaggacaccacggctggttttaattaaggg
tttttgattgatttaattaatcaattcgtgttaataaaatgactagtaat
attcgtgtaatcaGGTAGTCAAGAATTTGATTATAACTTTAATGACTAAG
ATTGCTATTTGCTTCATGTTTCATTACTCAGTAAAGCCCTTCACGAAACG
TTCATTATGAGCTCTTCCTCcaaacaaaatgaaagataaaCCCTAAAATT
CATTCAAAGTTGTATACAGTTTTATGTCGTACCCACCGACATCATATACA
AAACACTAGAAGGAGCTTCTTCGGCCCTTACTAAAGCAGAATTATACGAT
ATCTTAAGTAAACAAATTACAATTTAGTGAACTTTTATAAAAGATATTGC
CTATTTTGGTTCACCTATCGTGGCATGGGAAAGATATGGAGACACTGTTT
TAAGTGTCACTTTAACCTCCTTGAGGGAAGTGTGATATGActtttatttc
gtttttttctccAGTGAGTTTAGTAAAGAAAAAGAACGTGTTGAAAGTCG
TAACGAATTTTTGCGACAACGCCGTGAAGATGAAGCACGTGAGAGGGCCA
TAGCGAACGGTGAAGAATGGATCGATGAAGGGGAGAGACTCAGACTGGAG
GAAGAAGCCAGAAAATGTGAGtttttttGTGTGTCAATCCCCGTCTTTGT
AGTCATGATTGTATGCacaattgcaatgtcttctgacattacatcacggt
ccaaatagctgattggttgtaattgacgtaaaatcagtcaatgcatgact
ttcaaccaatcagctgttgggttcctggaagacattgcaatggtgcatca
TGAATTAGCTTTTTTCAACACCTAGCAACAATTACACCACCAAGGGGTTA
AGTTAAAATTGAACGTGGAGATTTAAGACtttttttGTGTTGTGCCAATC
CTCACCTAGCATTTATTTACACCACCAAGGAGTTAAACGCTTTGAAAGCG
ATTTGATGGAACAACAAGAGGCATCTTGAATGAACCTAAACTTTATTGGA
TCTTTGTGTAAATAAGGCATCAAATAGATGTGTGGTAGTTTTTCATTCTC
CTCTGGAACCTCGcgacaaaaatttcaattcagaGCGAGTTTTAACATCC
CTCTCTATAAATATCTGCAACTGCCAATAAGGAACAGTTGGTTGCCATTG
ATGAAATTTTACCTACCTTGCTCTGTATCTGTATCTATAATACCCCGATA
ATTTACTATCTTGCATTTCATAGTGGCAGAATCTCAAAAAGAAGAACCCA
TAGAAGGAGTCGACCCACCGCCTCAG Coding sequence (CDS) from alignment at sc0000159_pilon:420344..422969+ >XLOC_025948 ID=XLOC_025948|Name=XLOC_025948|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000159_pilon:420344..422969+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAATAGAAGCTGGTCGACTATGTTCCGAGGGGAGCTCAGGACGTCCATG
TCCCGAGGGAAGCATATGTAAAAGATACTGGGATGGTCCTAATTTTGGTG
TGACAAATTTCGATAATATTTTCAGTGCATGTCTGACTGTCTTTACGTGT
ATCACATGTGAAGGGTGGACAGATACTATGTATTGGCAAATAGAAGCTGG
TCGACTATGTTCCGAGGGGAGCTCAGGACGTCCATGTCCCGAGGGAAGCA
TATGTAAAAGATACTGGGATGGTCCTAATTTTGGTGTGACAAATTTCGAT
AATATTTTCAGTGCATGTCTGACTGTCTTTACGTGTATCACATGTGAAGG
GTGGACAGATACTATGTATTGGACGATGGATGTTATGGATTATGATGGAT
ATTATATGTTTTCGATTTATTGGCTTTTGAATGTCATTGGTGCTCAATTC
ATGTTGAATTTAGTCTGTGGTGTCCTCAGCGGACGATGGATGTTATGGAT
TATGATGGATATTATATGTTTTCGATTTATTGGCTTTTGAATGTCATTGG
TGCTCAATTCATGTTGAATTTAGTCTGTGGTGTCCTCAGCGGTGAGTTTA
GTAAAGAAAAAGAACGTGTTGAAAGTCGTAACGAATTTTTGCGACAACGC
CGTGAAGATGAAGCACGTGAGAGGGCCATAGCGAACGGTGAAGAATGGAT
CGATGAAGGGGAGAGACTCAGACTGGAGGAAGAAGCCAGAAAATTGAGTT
TAGTAAAGAAAAAGAACGTGTTGAAAGTCGTAACGAATTTTTGCGACAAC
GCCGTGAAGATGAAGCACGTGAGAGGGCCATAGCGAACGGTGAAGAATGG
ATCGATGAAGGGGAGAGACTCAGACTGGAGGAAGAAGCCAGAAAATTGGC
AGAATCTCAAAAAGAAGAACCCATAGAAGGAGTCGACCCACCGCCTCAGT
GGCAGAATCTCAAAAAGAAGAACCCATAGAAGGAGTCGACCCACCGCCTC
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:420344..422969 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 451-501:2576 |
| Aaloc | 298-447:1816 |
| Aaloc | 187-294:632 |
| Aaloc | 1-186:1 |
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