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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1706770..1708437+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025939 ID=XLOC_025939|Name=XLOC_025939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1668bp|location=Sequence derived from alignment at sc0000023_pilon:1706770..1708437+ (Clytia hemisphaerica_ch_hm2_pilon)
CCAACTAACGGTGGGAGAATGAATGAGAGGCGAGGAGAGTCGAATGGGAG
AAGTGTGGAGTGCTACAATTGCCATAAATTGGGCCACTTTTCAAGGGAAT
GTCCAGAACCTAGGAGAGAAAGGGGTTCACTCCGAACATTGACGACCAAT
GACGAGACAACTCCGCTGGAGGCTGATCAAGGAATTCAGTCCTTTAACAA
AAACCAACTTAGAATAAGTATTCCATTCAttgcaaatgaaaaactttctg
tCCTGAACCTAAACGTCAATTTCGGGGGAGCCTCTGTCTCAGCTCTGGTG
GACACGGGAGCCACAGCCTCCTGTATTAGTGAAGACTTTGGTAAGACATT
ACCCAAGGAAAACAAATTTATTACGGACGTCCCCACACACTTGAGTCTCG
CGACTGACAAAAGTGTCACCACAAACCTCAAAGCGATTTTTGAATTAGGA
TTAGGGCCAGGAGATCATTCCACAAAGATGGAATTTCTGATCGTCAAAGG
ACTCTCTTGTCCCATAATTTTGGGGAATGATTTTTTACGCCGATATGGCG
CTATAATAAATTACGATTTGAACAGTTTGGAGATCTCGAAACATGCGAAA
AACGATGACGAACAAGAACTTAAGATTAGTAAAATAACTTTTGAGTCAAA
TCCGGCCATGACACCGaaaaaaccaaaaaCTGTGAATCATGAAGATTACG
TTGAAGATCAAGTGAAGAATGTTAATGTCCCAGAGgacatgaaaaataat
ttccgaagatttttatttaaatactCGTCAGTTTTTTGTCATGACCCGGA
TAGCCTAACACCAGCCAATGTAGAGCCGTTTGAGATAAAACTTAAGGACA
AATCTCCTATCCAGTTGCGAGCGTATAAGGCTTCACCAAAAGTGAAACAA
GTGATCGAGGATCACATTGACAACCTTTTGAGAACCGGGGTCATCGAACC
CTCCCGGTCAGATTTCAGTTCTCCAGTAGTTATTACTCCAAAAAAGGGTG
GCACCTTTCGCTTTTGCGTGGActatagaaaattgaacaaacagATAGTA
ACGGAGGCCTACCCCCTGCCATTGATCGAAGACAATTTAGCCGATTTTAA
CGGTTCCCTGTTTTTTACGATAATTGACATGAGATCGGGTTACCATCAGG
TCCCTTTAGAGAAAAACTCACGAGCGTGCACGGCTTTCATTTGCCATATC
GGGTCGTTTCAGTTTAGAACAACCCCTTTTGGTCTGGTGCACGCTCCCGC
AGGTTTTCAAAGAAGAATTATGAAAGCTTTTGGCCAACCCCtacccgagt
ttgtgaaaatTTACTTGGACGACATCGTCGTCAAATCGAAATCCGCCCAT
GAGCATCTAAACCaccttgaacatgtttttgatgtcCTAGCTTATAAGAA
GCTCCAAATTAAACCAACCAAGTGTGAATTTTTTCGGACCTCCATTACAT
ATTTAGGCCACGTAGTCTCACGCAAAGGTATTGAGACTGATCCTGATAAG
GTCAAAGCGATTCGCGATTTCCCAACACCTACTTCAACAAAGCAGGTAAG
GAGTTTTGTTGGTCTAGCCACATATTATAAAAAGTTTATAATAAACTTTT
CCAACATTACCCGGCCGTTACATGCTCTTACTGGTGCGAATGTACGTTTC
GTATGGAATGAAGCAGCT Coding sequence (CDS) from alignment at sc0000023_pilon:1706770..1708437+ >XLOC_025939 ID=XLOC_025939|Name=XLOC_025939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3336bp|location=Sequence derived from alignment at sc0000023_pilon:1706770..1708437+ (Clytia hemisphaerica_ch_hm2_pilon)
CCAACTAACGGTGGGAGAATGAATGAGAGGCGAGGAGAGTCGAATGGGAG
AAGTGTGGAGTGCTACAATTGCCATAAATTGGGCCACTTTTCAAGGGAAT
GTCCAGAACCTAGGAGAGAAAGGGGTTCACTCCGAACATTGACGACCAAT
GACGAGACAACTCCGCTGGAGGCTGATCAAGGAATTCAGTCCTTTAACAA
AAACCAACTTAGAATAAGTATTCCATTCAttgcaaatgaaaaactttctg
tCCTGAACCTAAACGTCAATTTCGGGGGAGCCTCTGTCTCAGCTCTGGTG
GACACGGGAGCCACAGCCTCCTGTATTAGTGAAGACTTTGGTAAGACATT
ACCCAAGGAAAACAAATTTATTACGGACGTCCCCACACACTTGAGTCTCG
CGACTGACAAAAGTGTCACCACAAACCTCAAAGCGATTTTTGAATTAGGA
TTAGGGCCAGGAGATCATTCCACAAAGATGGAATTTCTGATCGTCAAAGG
ACTCTCTTGTCCCATAATTTTGGGGAATGATTTTTTACGCCGATATGGCG
CTATAATAAATTACGATTTGAACAGTTTGGAGATCTCGAAACATGCGAAA
AACGATGACGAACAAGAACTTAAGATTAGTAAAATAACTTTTGAGTCAAA
TCCGGCCATGACACCGaaaaaaccaaaaaCTGTGAATCATGAAGATTACG
TTGAAGATCAAGTGAAGAATGTTAATGTCCCAGAGgacatgaaaaataat
ttccgaagatttttatttaaatactCGTCAGTTTTTTGTCATGACCCGGA
TAGCCTAACACCAGCCAATGTAGAGCCGTTTGAGATAAAACTTAAGGACA
AATCTCCTATCCAGTTGCGAGCGTATAAGGCTTCACCAAAAGTGAAACAA
GTGATCGAGGATCACATTGACAACCTTTTGAGAACCGGGGTCATCGAACC
CTCCCGGTCAGATTTCAGTTCTCCAGTAGTTATTACTCCAAAAAAGGGTG
GCACCTTTCGCTTTTGCGTGGActatagaaaattgaacaaacagATAGTA
ACGGAGGCCTACCCCCTGCCATTGATCGAAGACAATTTAGCCGATTTTAA
CGGTTCCCTGTTTTTTACGATAATTGACATGAGATCGGGTTACCATCAGG
TCCCTTTAGAGAAAAACTCACGAGCGTGCACGGCTTTCATTTGCCATATC
GGGTCGTTTCAGTTTAGAACAACCCCTTTTGGTCTGGTGCACGCTCCCGC
AGGTTTTCAAAGAAGAATTATGAAAGCTTTTGGCCAACCCCtacccgagt
ttgtgaaaatTTACTTGGACGACATCGTCGTCAAATCGAAATCCGCCCAT
GAGCATCTAAACCaccttgaacatgtttttgatgtcCTAGCTTATAAGAA
GCTCCAAATTAAACCAACCAAGTGTGAATTTTTTCGGACCTCCATTACAT
ATTTAGGCCACGTAGTCTCACGCAAAGGTATTGAGACTGATCCTGATAAG
GTCAAAGCGATTCGCGATTTCCCAACACCTACTTCAACAAAGCAGGTAAG
GAGTTTTGTTGGTCTAGCCACATATTATAAAAAGTTTATAATAAACTTTT
CCAACATTACCCGGCCGTTACATGCTCTTACTGGTGCGAATGTACGTTTC
GTATGGAATGAAGCAGCTCCAACTAACGGTGGGAGAATGAATGAGAGGCG
AGGAGAGTCGAATGGGAGAAGTGTGGAGTGCTACAATTGCCATAAATTGG
GCCACTTTTCAAGGGAATGTCCAGAACCTAGGAGAGAAAGGGGTTCACTC
CGAACATTGACGACCAATGACGAGACAACTCCGCTGGAGGCTGATCAAGG
AATTCAGTCCTTTAACAAAAACCAACTTAGAATAAGTATTCCATTCAttg
caaatgaaaaactttctgtCCTGAACCTAAACGTCAATTTCGGGGGAGCC
TCTGTCTCAGCTCTGGTGGACACGGGAGCCACAGCCTCCTGTATTAGTGA
AGACTTTGGTAAGACATTACCCAAGGAAAACAAATTTATTACGGACGTCC
CCACACACTTGAGTCTCGCGACTGACAAAAGTGTCACCACAAACCTCAAA
GCGATTTTTGAATTAGGATTAGGGCCAGGAGATCATTCCACAAAGATGGA
ATTTCTGATCGTCAAAGGACTCTCTTGTCCCATAATTTTGGGGAATGATT
TTTTACGCCGATATGGCGCTATAATAAATTACGATTTGAACAGTTTGGAG
ATCTCGAAACATGCGAAAAACGATGACGAACAAGAACTTAAGATTAGTAA
AATAACTTTTGAGTCAAATCCGGCCATGACACCGaaaaaaccaaaaaCTG
TGAATCATGAAGATTACGTTGAAGATCAAGTGAAGAATGTTAATGTCCCA
GAGgacatgaaaaataatttccgaagatttttatttaaatactCGTCAGT
TTTTTGTCATGACCCGGATAGCCTAACACCAGCCAATGTAGAGCCGTTTG
AGATAAAACTTAAGGACAAATCTCCTATCCAGTTGCGAGCGTATAAGGCT
TCACCAAAAGTGAAACAAGTGATCGAGGATCACATTGACAACCTTTTGAG
AACCGGGGTCATCGAACCCTCCCGGTCAGATTTCAGTTCTCCAGTAGTTA
TTACTCCAAAAAAGGGTGGCACCTTTCGCTTTTGCGTGGActatagaaaa
ttgaacaaacagATAGTAACGGAGGCCTACCCCCTGCCATTGATCGAAGA
CAATTTAGCCGATTTTAACGGTTCCCTGTTTTTTACGATAATTGACATGA
GATCGGGTTACCATCAGGTCCCTTTAGAGAAAAACTCACGAGCGTGCACG
GCTTTCATTTGCCATATCGGGTCGTTTCAGTTTAGAACAACCCCTTTTGG
TCTGGTGCACGCTCCCGCAGGTTTTCAAAGAAGAATTATGAAAGCTTTTG
GCCAACCCCtacccgagtttgtgaaaatTTACTTGGACGACATCGTCGTC
AAATCGAAATCCGCCCATGAGCATCTAAACCaccttgaacatgtttttga
tgtcCTAGCTTATAAGAAGCTCCAAATTAAACCAACCAAGTGTGAATTTT
TTCGGACCTCCATTACATATTTAGGCCACGTAGTCTCACGCAAAGGTATT
GAGACTGATCCTGATAAGGTCAAAGCGATTCGCGATTTCCCAACACCTAC
TTCAACAAAGCAGGTAAGGAGTTTTGTTGGTCTAGCCACATATTATAAAA
AGTTTATAATAAACTTTTCCAACATTACCCGGCCGTTACATGCTCTTACT
GGTGCGAATGTACGTTTCGTATGGAATGAAGCAGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1706770..1708437 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 4-1671:1 |
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