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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000384_pilon:217786..220636+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025913 ID=XLOC_025913|Name=XLOC_025913|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2851bp|location=Sequence derived from alignment at sc0000384_pilon:217786..220636+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATACGCATTACTTCAATGTTTTGACAAAAGCAAGATTGTAGAGAC
AATCGTCCCCACACATTGGATAGAGGACAAGACCATGTGGTGGCCATCAA
ACAAGGCTAGGCAGTCAGCCATTGATCTGATTCCCTTAGATAAGTCCTGG
AAATCTTATGCTGTGTTGGAGATTAAGAGATACAGTGGTTAGtataatta
tttcaatttgaagGTTTGTGTTATTATTTTGAAAGTTAGGCATTTAAATA
CTGCACTTTCATCCGGAAAATcttaatttaaaattcaaactttctaCAGC
CTTTCGTAtcagttttacttttttatatttctagATGACTTTGAAGAGTT
AGAAAAAGGTTCATACACCACAACAGAAGCAGAGGTTACACCTGTCAAGA
AGAAGCCGGAACGTAAGTTGCAACAATCATTCTTATGATCTTACTCAATA
TAagtaaaataccaaaattagaTATTAAAATTATGCTATTTTGAACAGTT
TTGAAATGTATGACATCTTTTGCGTACCAAATGGTACTATAGCTTTCATA
GCTCTTAATTCTgctttttgaatatatttaaagCTGTTGAAAGAGCACCG
AGTCCACACTTCAACGTCCAGACAATGTTTTCGGCAAGTCTCCCTGGTGC
ATCCAAAGCGAAGCCGTCAAATCTCTCACCGTCTCCTCCTGTAGCTTCAG
ATGCTGTCAGAATGTGTGAGTTTACTTTTACTTATTTTAACCAATCATGA
AATTCCAGAGCCCCTGTAATTTCTGTTTACACTTCCAAATCCATCTTCAA
AATAAGTCAAAGAAGTACATAGTGCCCAAAAGTTTTCTCTTCTCTCTCCT
TTGTTTAGATATTGTATGGATTTGTTAAATTTGAATAGAATAAGATTACA
CTTACAGATTTTTCacaagaaccagtaaaatttttctgacgcttggctgt
tcttatttttatggcactttcagcctcaaattattcttatctcatttttt
aattattttttcattacagCAGGCGCACAAAATTATATTAGATCGAGCTA
TTCACCAGTCTCGAATTTGCCGAATGGTTTCATTCCGATAACAAAGGCAT
TAAATTTCCAAGGTATTCAATACGCTATAGATTAGTGATGACATATTTCA
GAGGCTTTGAGCGTTCAAtgttaggaaatttttttgaatttttgttaatC
GTTATCAATTTCAATAATGAGAACAAAAGCCTTATTCAAGTAGGGGGAGT
TATACTGTGTGTCTATCCAAGTTtcaccctgtctcacagccccggtggaa
ctttctCCCACAATTAAGCCCCGTGgttctgtgagacaggggtgttaagt
TAATACTTTTAATCCCTTAGATGACAATCCACTGAATTCGTCAACAAATT
CAATTCGACTGAATTCGTCATCAAATTCAATCCGACTAAATTCGTCAACA
AATTCAATTCGTCATACTCGTCAAGAATGTAAGATTCCATTACTTCAGaa
gaatgaacaaaatttggaaaaacccaGTCTTGTCAATGAATTTCGATAAT
TTTTCACCTTGCCCACACAGCACAGTGTGACCATTATTTTATTAATGATG
GATCGTCATGAggatcaaaaaactttttgtaattactttgatttaaaaaa
aatcttcttcctAAATTCTTAGTCTTTGGAGACTTTTCGAAATGTTCAAT
CTTCATAATGCGCTATCGATTATTTTTCAGCAATCACATCTCCCAAGCTT
CCGAAATCAAATAAATACCCAAGTGGTGGTGGAAATGACTTTAAAGAAAT
GTCCAATAAACGTAAGaaatatttatctttttttgtaaGAGAAGTTAATT
GAAAGATTTGACAAATATATTTgtttattatccgacgcgcgtaaatagcg
acatttgattggcttctttgctgtccaatattttcgaattcatgatatgc
accactgcaatgtcttctgacattacatcacggaaccaatcgctcattgg
ttgtaagtgacgtaaaatcagtcaatacgtcactttgaaccaatcagcta
ttgggtggaatggaagacattgcaatggtgcatatcatgaatatatagct
tccatggaggctacatatttcaaaaattcacgtcacacaacgagttcaat
gacaattgagcatcttctttttgacgttacgtcacaaaataaaaataaga
cttttgaataaaaaactaccaagaaaccagatttacgagcatataaattg
gaattatgtttgaaaacgagaaatattttagcgatgaacggataataaac
catttatttggacgcagtctcatccaatatgaaaaatattgggctacgag
aaaagatattggactcggcgaagcctcgtccaatatcttttctcgcacgc
ccaatatttttgcatataggattcgactttgtccaataactgcttaatag
ctttaaagaaattgatgatcttttttttaatcataagctttcgtaaagca
atgaaaataaagtgaCTTGCTGTTCAACGTTTCATGTGTTGTTTATCCAC
TCTATAATAAATCTTAGAGTTTAAGACTATTAAAGCACATTACAGAAAGc
aacaaaattatcattttttaggTTTCCAATATACAATGATGATGGACATA
AAGAAAGTTCAGGAAACACAGAAgcaaattttggatgttttaagtaATAT
AAATACGGATGCCAATCAAATTCAAGACGAAGAAGATGACGAAATTGAAC
AGAGTTCGACAATGGACCAATTTGAGAGAGTGGAGGAAGAATTGAAACGT
CCAGAGAAACGTAGAGCGAAAGTACGTCAAACCTATTTTATTGACTTTCT
A Coding sequence (CDS) from alignment at sc0000384_pilon:217786..220636+ >XLOC_025913 ID=XLOC_025913|Name=XLOC_025913|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000384_pilon:217786..220636+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATACGCATTACTTCAATGTTTTGACAAAAGCAAGATTGTAGAGAC
AATCGTCCCCACACATTGGATAGAGGACAAGACCATGTGGTGGCCATCAA
ACAAGGCTAGGCAGTCAGCCATTGATCTGATTCCCTTAGATAAGTCCTGG
AAATCTTATGCTGTGTTGGAGATTAAGAGATACAGTGATGGCATACGCAT
TACTTCAATGTTTTGACAAAAGCAAGATTGTAGAGACAATCGTCCCCACA
CATTGGATAGAGGACAAGACCATGTGGTGGCCATCAAACAAGGCTAGGCA
GTCAGCCATTGATCTGATTCCCTTAGATAAGTCCTGGAAATCTTATGCTG
TGTTGGAGATTAAGAGATACAGTGATGACTTTGAAGAGTTAGAAAAAGGT
TCATACACCACAACAGAAGCAGAGGTTACACCTGTCAAGAAGAAGCCGGA
ACATGACTTTGAAGAGTTAGAAAAAGGTTCATACACCACAACAGAAGCAG
AGGTTACACCTGTCAAGAAGAAGCCGGAACCTGTTGAAAGAGCACCGAGT
CCACACTTCAACGTCCAGACAATGTTTTCGGCAAGTCTCCCTGGTGCATC
CAAAGCGAAGCCGTCAAATCTCTCACCGTCTCCTCCTGTAGCTTCAGATG
CTGTCAGAATGTCTGTTGAAAGAGCACCGAGTCCACACTTCAACGTCCAG
ACAATGTTTTCGGCAAGTCTCCCTGGTGCATCCAAAGCGAAGCCGTCAAA
TCTCTCACCGTCTCCTCCTGTAGCTTCAGATGCTGTCAGAATGTCAGGCG
CACAAAATTATATTAGATCGAGCTATTCACCAGTCTCGAATTTGCCGAAT
GGTTTCATTCCGATAACAAAGGCATTAAATTTCCAAGCAGGCGCACAAAA
TTATATTAGATCGAGCTATTCACCAGTCTCGAATTTGCCGAATGGTTTCA
TTCCGATAACAAAGGCATTAAATTTCCAAGATGACAATCCACTGAATTCG
TCAACAAATTCAATTCGACTGAATTCGTCATCAAATTCAATCCGACTAAA
TTCGTCAACAAATTCAATTCGTCATACTCGTCAAGAATATGACAATCCAC
TGAATTCGTCAACAAATTCAATTCGACTGAATTCGTCATCAAATTCAATC
CGACTAAATTCGTCAACAAATTCAATTCGTCATACTCGTCAAGAATCAAT
CACATCTCCCAAGCTTCCGAAATCAAATAAATACCCAAGTGGTGGTGGAA
ATGACTTTAAAGAAATGTCCAATAAACCAATCACATCTCCCAAGCTTCCG
AAATCAAATAAATACCCAAGTGGTGGTGGAAATGACTTTAAAGAAATGTC
CAATAAACgTTTCCAATATACAATGATGATGGACATAAAGAAAGTTCAGG
AAACACAGAAgcaaattttggatgttttaagtaATATAAATACGGATGCC
AATCAAATTCAAGACGAAGAAGATGACGAAATTGAACAGAGTTCGACAAT
GGACCAATTTGAGAGAGTGGAGGAAGAATTGAAACGTCCAGAGAAACGTA
GAGCGAAAGTACGTCAAACCTATTTTATTGACTTTCTAgTTTCCAATATA
CAATGATGATGGACATAAAGAAAGTTCAGGAAACACAGAAgcaaattttg
gatgttttaagtaATATAAATACGGATGCCAATCAAATTCAAGACGAAGA
AGATGACGAAATTGAACAGAGTTCGACAATGGACCAATTTGAGAGAGTGG
AGGAAGAATTGAAACGTCCAGAGAAACGTAGAGCGAAAGTACGTCAAACC
TATTTTATTGACTTTCTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000384_pilon | genome | sc0000384_pilon:217786..220636 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 685-912:2624 |
| Aaloc | 604-681:1733 |
| Aaloc | 496-600:1373 |
| Aaloc | 454-492:1073 |
| Aaloc | 400-450:1022 |
| Aaloc | 268-396:586 |
| Aaloc | 190-264:337 |
| Aaloc | 1-186:1 |
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