XLOC_025851 (mRNA) -

Overview
NameXLOC_025851
Unique NameXLOC_025851
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000059_pilon:1758764..1760196+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025851 ID=XLOC_025851|Name=XLOC_025851|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1433bp|location=Sequence derived from alignment at sc0000059_pilon:1758764..1760196+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTCGAAAAGTGAAGAAAGTGATTAACCACGGTGGATTTAGTTCCAGTAC ACTCTCAAACGATATTTCTTTGTTTGAGTTGGATCAAGAAGTGCAAATCA ACGACTATGTTCGTCCTGCGTGCTTGCTGGAGAAAGAACTAACTGCAGGA ACTAAAGTTGTTATTTCTGGCTGGGGAACAACGCAACCAGGTGGAAGCCA ACCCAATATTCTCTAAAAAGCTGAGGTAGCTTATTTatgtgcccgggggg gggggggtactagggttgcgagctgacgggggggggtgccgcccgacttt cgaactttggacccttaccgggactaaaaaggagaaaacagaggaaaatt ttgggaattttacgacccttagcgggactaatttgaccaattttgaccaa atttcgatgtttcagggggtaaaaagttgaaattttttgatttttcgacc cttagcgggactttggaagtccaaaaaaggtacccttaagggcggcacat accgtaccctccatctgcctaagtacccccccccctgggtttATGTGATG GTGTTGTGTAGGGGTTCTACTGTGCCTATAAATTGATTTCAATGTCAATT TAGAGCAACTCGGGCATAACAACTTGTAATATGACCAatactgtatataa aaaaagatCACTCGTCAACCTTAAggactctgaccatagtcgaaaaattg atatTGGTATTTGAACATGAAAGTTGTGTTCcaataagaatttaattgca aaaatgacgttacgaactttaaaaagacgttctTTAACgaaaattgctta aaaatgggtgattaacctttttcttttaaagtttttcaaactgtccgcaa agaatttaacagtcttaaattttttggagaaattttctaaattgatgcat TAAAAATTATGActgtttttgtagaaaaattgggatgaaaaatttggtta aaaagcactattttcaaaatgttttcttcgCCGAAGGTGCTGAAGGTGGG GGGTTTTAATGGGAGGTTCCCAAGACCTTCCCTTaactctgtgcaaaatt tcagctttatatgtatttttttccGGTCATAACATAATTCCCTTTTACTA AAAAGTCGTCATCAAATCGTtccattgcgattcttaaatttcagACTCAC GGATATATGGTCTAAAATGGGcccaaaaaatgtaaaacatgCCAAAATTT TGTTAGCTAACATCAGGGAGAAACATTTATTATGTTCCTTGCAAATATCA AAAGCCCTTAAGGCTCCCTTGTTTTTAGAGTTTGCTAACTCTGATACAAG TTCTGAAACAtcgtctttttattttcaggtggACATTGTTAGTAATAGTG TATGCAACACGAAATATAATAATCGTATTGACAATTCAATGTTATGTGCT GCTGCTCCGGGGAAAGACTCATGTCAAGTAAGA

Coding sequence (CDS) from alignment at sc0000059_pilon:1758764..1760196+

>XLOC_025851 ID=XLOC_025851|Name=XLOC_025851|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=660bp|location=Sequence derived from alignment at sc0000059_pilon:1758764..1760196+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTCGAAAAGTGAAGAAAGTGATTAACCACGGTGGATTTAGTTCCAGTAC
ACTCTCAAACGATATTTCTTTGTTTGAGTTGGATCAAGAAGTGCAAATCA
ACGACTATGTTCGTCCTGCGTGCTTGCTGGAGAAAGAACTAACTGCAGGA
ACTAAAGTTGTTATTTCTGGCTGGGGAACAACGCAACCAGGTGGAAGCCA
ACCCAATATTCTCTAAAAAGCTGAGATTCGAAAAGTGAAGAAAGTGATTA
ACCACGGTGGATTTAGTTCCAGTACACTCTCAAACGATATTTCTTTGTTT
GAGTTGGATCAAGAAGTGCAAATCAACGACTATGTTCGTCCTGCGTGCTT
GCTGGAGAAAGAACTAACTGCAGGAACTAAAGTTGTTATTTCTGGCTGGG
GAACAACGCAACCAGGTGGAAGCCAACCCAATATTCTCTAAAAAGCTGAG
gtggACATTGTTAGTAATAGTGTATGCAACACGAAATATAATAATCGTAT
TGACAATTCAATGTTATGTGCTGCTGCTCCGGGGAAAGACTCATGTCAAG
TAAGAgtggACATTGTTAGTAATAGTGTATGCAACACGAAATATAATAAT
CGTATTGACAATTCAATGTTATGTGCTGCTGCTCCGGGGAAAGACTCATG
TCAAGTAAGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_025851XLOC_025851-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059_pilongenomesc0000059_pilon:1758764..1760196 +
Properties
Property NameValue
Aaloc235-339:1329
Aaloc202-234:193
Aaloc13-201:1