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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000357_pilon:20323..21772+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025850 ID=XLOC_025850|Name=XLOC_025850|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1450bp|location=Sequence derived from alignment at sc0000357_pilon:20323..21772+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTGCTGCTAACATGACGATGGATGAGTTCGCAAAAGCTACAGAAAAAGA
TGGGTTTCAAACAATCAAAGTCAAGAAGCACAAAACCTATTTAAAACATG
GACCAGCACATGTGACACTGAGATCAAACATATACGGCCATCTTAAAATT
TATGTTGAGAATTTGAGGCCAACCTTCGCTAAAAGAGACAGCTCTCACGT
TTTTCTGTCGAGCAATGGTAGACAGATGACTTCAGGGGATGTCAGCAAGA
GAATAGATAATATCTGGAAGTCATCTGGTGTCTACGGTGAAAATCCCCCA
CCAAAGAAGAACGTCACTGGCAATATCATCAGGAAGTCAATGACGACTTT
GGTGCATGAGTCAAGTGAAGACAACCAAGCAGTAGCAGACCTCTTAGCAC
ATCGTTTAGGAACAGCCGAAAAGATCTATCGAGTAAAGAAGATGGGGCAA
CAAGCTCGGGCAGGCGCGACAGCAATCGAAAATGTTACAAGAAGAAATCA
AAGCACCGACAAATCTGCCGGGTAATTCAGCTACGTTGTATCTTATAAAT
TCTAACAAATATAATTATAATCACTTGCACAAGCCCGAGAAATCATGGAA
AAACACTTTCGAACGTTTAGTTTATTTTATGTTCAAGAGAGTTTTGCAAA
CACAGGCCGAATTCATGTCTTTATCACGTGTTTCTTGATTTTAAAAACCA
TAGGGCTTCTGGGTCTGAGCCATCAACCAGCAGTAAAGGTCTGGAGAATG
GAAATACCAAAGCACGTGATCGAAGCGATGTTGATGAAGGAGACGGCGCA
ATCAAGAGGGTGACCAGAAGAAGTCAACTTAAAATGATGGAAATATCTGT
TGGGCAAGTCATGTTTGATTTAATTTCCCATTTGGTAAAATTCTATACAA
TTAGAAAACTGAATTTTGTTAAATGTAATCATAAAATCAGATTATGCCCC
TTCTCACTCAGGGACTGATAATACGAAAGggaacaaaagaaaagttttga
taaaaatggccGAATATACGTGTCTAGcaggtgtttttttattttcaaat
ccataGAATGTCTGGATCCGAACCATCGACCAGTAGTAAAGATCTGGAAA
ATGGAATTGCTGAATCATATGATGGAAGCAATGTTGATGAGGAAGACGAA
GAAGAAGTGAGCTCTCATTGCGAAAGAGATAGTGAAGACAGTGACGTTAT
TCCACCTTCAACATGTGGCGATTATGGAAAGACCAAAGTTTTTACACATG
AAGAAACCACTATAATATACGAGCTACTTCAAGACGTCATCCTGACTCCT
CCGATCAACGGTTCCAGGATCAAAAACGTGTTATCTAGAACCAAATTAGG
AAGTTCGTTTTTGAGAAAGTTTAATATGGAATCTTTGATTAATAAAGCTA
AATACGGTAAAAAACTTTACAAGGAAAAGAAATTGTCTTTTTCCAAATAA
Coding sequence (CDS) from alignment at sc0000357_pilon:20323..21772+ >XLOC_025850 ID=XLOC_025850|Name=XLOC_025850|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2130bp|location=Sequence derived from alignment at sc0000357_pilon:20323..21772+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTGCTGCTAACATGACGATGGATGAGTTCGCAAAAGCTACAGAAAAAGA
TGGGTTTCAAACAATCAAAGTCAAGAAGCACAAAACCTATTTAAAACATG
GACCAGCACATGTGACACTGAGATCAAACATATACGGCCATCTTAAAATT
TATGTTGAGAATTTGAGGCCAACCTTCGCTAAAAGAGACAGCTCTCACGT
TTTTCTGTCGAGCAATGGTAGACAGATGACTTCAGGGGATGTCAGCAAGA
GAATAGATAATATCTGGAAGTCATCTGGTGTCTACGGTGAAAATCCCCCA
CCAAAGAAGAACGTCACTGGCAATATCATCAGGAAGTCAATGACGACTTT
GGTGCATGAGTCAAGTGAAGACAACCAAGCAGTAGCAGACCTCTTAGCAC
ATCGTTTAGGAACAGCCGAAAAGATCTATCGAGTAAAGAAGATGGGGCAA
CAAGCTCGGGCAGGCGCGACAGCAATCGAAAATGTTACAAGAAGAAATCA
AAGCACCGACAAATCTGCCGGGTTGCTGCTAACATGACGATGGATGAGTT
CGCAAAAGCTACAGAAAAAGATGGGTTTCAAACAATCAAAGTCAAGAAGC
ACAAAACCTATTTAAAACATGGACCAGCACATGTGACACTGAGATCAAAC
ATATACGGCCATCTTAAAATTTATGTTGAGAATTTGAGGCCAACCTTCGC
TAAAAGAGACAGCTCTCACGTTTTTCTGTCGAGCAATGGTAGACAGATGA
CTTCAGGGGATGTCAGCAAGAGAATAGATAATATCTGGAAGTCATCTGGT
GTCTACGGTGAAAATCCCCCACCAAAGAAGAACGTCACTGGCAATATCAT
CAGGAAGTCAATGACGACTTTGGTGCATGAGTCAAGTGAAGACAACCAAG
CAGTAGCAGACCTCTTAGCACATCGTTTAGGAACAGCCGAAAAGATCTAT
CGAGTAAAGAAGATGGGGCAACAAGCTCGGGCAGGCGCGACAGCAATCGA
AAATGTTACAAGAAGAAATCAAAGCACCGACAAATCTGCCGGGGCTTCTG
GGTCTGAGCCATCAACCAGCAGTAAAGGTCTGGAGAATGGAAATACCAAA
GCACGTGATCGAAGCGATGTTGATGAAGGAGACGGCGCAATCAAGAGGGT
GACCAGAAGAAGTCAACTTAAAATGATGGAAATATCTGTTGGGGCTTCTG
GGTCTGAGCCATCAACCAGCAGTAAAGGTCTGGAGAATGGAAATACCAAA
GCACGTGATCGAAGCGATGTTGATGAAGGAGACGGCGCAATCAAGAGGGT
GACCAGAAGAAGTCAACTTAAAATGATGGAAATATCTGTTGGAATGTCTG
GATCCGAACCATCGACCAGTAGTAAAGATCTGGAAAATGGAATTGCTGAA
TCATATGATGGAAGCAATGTTGATGAGGAAGACGAAGAAGAAGTGAGCTC
TCATTGCGAAAGAGATAGTGAAGACAGTGACGTTATTCCACCTTCAACAT
GTGGCGATTATGGAAAGACCAAAGTTTTTACACATGAAGAAACCACTATA
ATATACGAGCTACTTCAAGACGTCATCCTGACTCCTCCGATCAACGGTTC
CAGGATCAAAAACGTGTTATCTAGAACCAAATTAGGAAGTTCGTTTTTGA
GAAAGTTTAATATGGAATCTTTGATTAATAAAGCTAAATACGGTAAAAAA
CTTTACAAGGAAAAGAAATTGTCTTTTTCCAAATAAAATGTCTGGATCCG
AACCATCGACCAGTAGTAAAGATCTGGAAAATGGAATTGCTGAATCATAT
GATGGAAGCAATGTTGATGAGGAAGACGAAGAAGAAGTGAGCTCTCATTG
CGAAAGAGATAGTGAAGACAGTGACGTTATTCCACCTTCAACATGTGGCG
ATTATGGAAAGACCAAAGTTTTTACACATGAAGAAACCACTATAATATAC
GAGCTACTTCAAGACGTCATCCTGACTCCTCCGATCAACGGTTCCAGGAT
CAAAAACGTGTTATCTAGAACCAAATTAGGAAGTTCGTTTTTGAGAAAGT
TTAATATGGAATCTTTGATTAATAAAGCTAAATACGGTAAAAAACTTTAC
AAGGAAAAGAAATTGTCTTTTTCCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000357_pilon | genome | sc0000357_pilon:20323..21772 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-1065:1058 |
| Aaloc | 523-669:705 |
| Aaloc | 1-519:1 |
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