XLOC_025817.2 (mRNA) -

Overview
NameXLOC_025817.2
Unique NameXLOC_025817.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000322_pilon:5188..5716+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025817.2 ID=XLOC_025817.2|Name=XLOC_025817.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=529bp|location=Sequence derived from alignment at sc0000322_pilon:5188..5716+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaaactttaatcgtGAAAATTTTCTATTGGATTACCTTGGTATACC ATGGGATGAACTTCTTCTTAATAAAAACCCAAGTGAAAAActagaaattt ttatcaaaacatcaCAAGAAAAAATTGACACTCATGCTCCTATTAAACTC ACAAACCAAAAACATGCCTCTGCTCATAAACCCTGGGTCACTACAGGGCT cctaaaatcaatcaaaacgaaggactttttatacaaaaagtttctaaaat caaaacaacaagctcttaaatctatcaaacatcaaaattacaaaacctac aaaaaccttcttgtcaaactactcagaaaaagcaaaaataattactacaa aaactaTTTTGAAACTCACAAGTCAAATCTAAAACTAGTCTGGAAAGCAA TTAATGAGGTCACCAATAACAAAAGCAAACAAGATCTTTCTCCAAAACTA GTCATACacaacaacaagaaaataaCCAACGAAAAAGAAATTGCAGATAC TTTTAACAATTATTATGGTTCTATTGCTG

Coding sequence (CDS) from alignment at sc0000322_pilon:5188..5716+

>XLOC_025817.2 ID=XLOC_025817.2|Name=XLOC_025817.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1058bp|location=Sequence derived from alignment at sc0000322_pilon:5188..5716+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaaactttaatcgtGAAAATTTTCTATTGGATTACCTTGGTATACC
ATGGGATGAACTTCTTCTTAATAAAAACCCAAGTGAAAAActagaaattt
ttatcaaaacatcaCAAGAAAAAATTGACACTCATGCTCCTATTAAACTC
ACAAACCAAAAACATGCCTCTGCTCATAAACCCTGGGTCACTACAGGGCT
cctaaaatcaatcaaaacgaaggactttttatacaaaaagtttctaaaat
caaaacaacaagctcttaaatctatcaaacatcaaaattacaaaacctac
aaaaaccttcttgtcaaactactcagaaaaagcaaaaataattactacaa
aaactaTTTTGAAACTCACAAGTCAAATCTAAAACTAGTCTGGAAAGCAA
TTAATGAGGTCACCAATAACAAAAGCAAACAAGATCTTTCTCCAAAACTA
GTCATACacaacaacaagaaaataaCCAACGAAAAAGAAATTGCAGATAC
TTTTAACAATTATTATGGTTCTATTGCTGatgaaaaactttaatcgtGAA
AATTTTCTATTGGATTACCTTGGTATACCATGGGATGAACTTCTTCTTAA
TAAAAACCCAAGTGAAAAActagaaatttttatcaaaacatcaCAAGAAA
AAATTGACACTCATGCTCCTATTAAACTCACAAACCAAAAACATGCCTCT
GCTCATAAACCCTGGGTCACTACAGGGCTcctaaaatcaatcaaaacgaa
ggactttttatacaaaaagtttctaaaatcaaaacaacaagctcttaaat
ctatcaaacatcaaaattacaaaacctacaaaaaccttcttgtcaaacta
ctcagaaaaagcaaaaataattactacaaaaactaTTTTGAAACTCACAA
GTCAAATCTAAAACTAGTCTGGAAAGCAATTAATGAGGTCACCAATAACA
AAAGCAAACAAGATCTTTCTCCAAAACTAGTCATACacaacaacaagaaa
ataaCCAACGAAAAAGAAATTGCAGATACTTTTAACAATTATTATGGTTC
TATTGCTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_025817.2XLOC_025817.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000322_pilongenomesc0000322_pilon:5188..5716 +
Properties
Property NameValue
Aaloc484-528:485
Aaloc1-483:1