XLOC_025791 (mRNA) -

Overview
NameXLOC_025791
Unique NameXLOC_025791
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000360_pilon:184946..186389+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025791 ID=XLOC_025791|Name=XLOC_025791|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1444bp|location=Sequence derived from alignment at sc0000360_pilon:184946..186389+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGAAGGGCAGGGGCAAAGTTATGGCTCCTCCTATTCTGGTtcagattt tgattttgttgaattcaTCAAAAGACCATTGACTATCTGCAGATTATTAT GTATTGTAAGTGATTTTACCctttttggttgaattttgttctgcatctaa agtctgtctcaaaagtaaGCTGACActtaaattttttaacaatttttgct tttttgaaaaattatacactGTTAGGAATATGATGtaattactttgaata aacgccccgggcgtttattaaattttttgtgtgtttattcgagggggcgt ttaaaagaagggagcGTTTATTGAATAATTTCCATTCAAGATCACCTTTG GAGGGAATCAATACCCTAATTTGTCTTTATTGATCTTTAAGCCCGAATAT CCCtgtttaaaaacataaaattgtgTCAAAATTACTTTAGTTGTGAAGAT GCTACAAATTTTAATTAACCAATATGtatctttgattttatttaaacaCT TTCTTGATGCTTGAAGccacttgtttcaaataaacgcccctcctggaggg ggcgtttattgaataATTTCCCTTTtagagggggcgtttaaaagaaaggg gcgtttattcgaagtaatacggtagaTTAAAATGTTTTATACTATCaaga atcaaaattcaaaaatcatagCATGACACTTATATTTGAACCTCGCTGAT TTCAAATccactttctgatttttcaagtGTCTATATCATCTTTTGTATAA TTCCCTTCGAGAAtatctttcaaactttttaacatAGGGTTCTgagaaat tgttgaaaaagtaaagtgtccacatacttttgagatagacctaaatatat atttttatactTGAAACTGAGAGTAAAACAAATGAATtaatatttcaatg tttttctttaattGTCTTTATCACTCTTCAGATAGAGAAAAACGTGACTT TTCAGAAGCCTGGAGAAGTTATTTCTCCTGGAGGGTTTCTTGGGGTTTAT AAGTAAGTCTACGACTACAGTTGGAGGTGACTCAAAGGTTCCTTATTCGA TAGCTGCCTACCCAATGGTAGCGAAGAGTCGTTAGGTTGCTAAGCCATTT TTGCCATCCTATTATTACGAAAACTTGCCTGTACAAATTGTGTAAAATTG ATTCTTATCCTGTCTCCCTTTTAGCTTTTCGCTATCGTTGTTTTTGGATG TATCTCAGCTGGTGGTTATGATGATGCATCAAAGCATTGTGTGTTCAACA GAAACAAAAACGCCTGTCAATATGGTGTCGCCATTGGTGTTATCGCATTC CTAGCGTGTCTACTATTCCTTGCTGTTGATGCACAATTTGACAGCATTAG TAACACAGTCAACAGACGTCACCTGGTGACTGCGGATCTTGGATTTTCAG CTTTCTGGACATTTCTTTGGTTCGTTGGCTTTTGTTTCTTGGCT

Coding sequence (CDS) from alignment at sc0000360_pilon:184946..186389+

>XLOC_025791 ID=XLOC_025791|Name=XLOC_025791|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=750bp|location=Sequence derived from alignment at sc0000360_pilon:184946..186389+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGAAGGGCAGGGGCAAAGTTATGGCTCCTCCTATTCTGGTtcagattt
tgattttgttgaattcaTCAAAAGACCATTGACTATCTGCAGATTATTAT
GTATTatgGAAGGGCAGGGGCAAAGTTATGGCTCCTCCTATTCTGGTtca
gattttgattttgttgaattcaTCAAAAGACCATTGACTATCTGCAGATT
ATTATGTATTCTTTTCGCTATCGTTGTTTTTGGATGTATCTCAGCTGGTG
GTTATGATGATGCATCAAAGCATTGTGTGTTCAACAGAAACAAAAACGCC
TGTCAATATGGTGTCGCCATTGGTGTTATCGCATTCCTAGCGTGTCTACT
ATTCCTTGCTGTTGATGCACAATTTGACAGCATTAGTAACACAGTCAACA
GACGTCACCTGGTGACTGCGGATCTTGGATTTTCAGCTTTCTGGACATTT
CTTTGGTTCGTTGGCTTTTGTTTCTTGGCTCTTTTCGCTATCGTTGTTTT
TGGATGTATCTCAGCTGGTGGTTATGATGATGCATCAAAGCATTGTGTGT
TCAACAGAAACAAAAACGCCTGTCAATATGGTGTCGCCATTGGTGTTATC
GCATTCCTAGCGTGTCTACTATTCCTTGCTGTTGATGCACAATTTGACAG
CATTAGTAACACAGTCAACAGACGTCACCTGGTGACTGCGGATCTTGGAT
TTTCAGCTTTCTGGACATTTCTTTGGTTCGTTGGCTTTTGTTTCTTGGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_025791XLOC_025791-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000360_pilongenomesc0000360_pilon:184946..186389 +
Properties
Property NameValue
Aaloc106-375:1175
Aaloc1-105:1